RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 IFFO1Q0D2I5 559 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 GOLGA8BA8MQT2 603 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 GCP02774 474 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 GPTP24298 496 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 PDE1AP54750 535 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 UTP14AQ9BVJ6 771 aaKnown RBP11.47□□□□□ -0.57
TNS3-204ENST00000428457 RASSF4Q9H2L5 321 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 FBLN1P23142 703 aa11.47□□□□□ -0.57
TNS3-204ENST00000428457 CCDC196A0A1B0GTZ2 297 aa11.46□□□□□ -0.57
TNS3-204ENST00000428457 YEATS4O95619 227 aa11.46□□□□□ -0.57
TNS3-204ENST00000428457 SYT1P21579 422 aa11.46□□□□□ -0.57
TNS3-204ENST00000428457 TTC31Q49AM3 519 aaPredicted RBP11.46□□□□□ -0.57
TNS3-204ENST00000428457 CCDC178Q5BJE1 867 aa11.46□□□□□ -0.57
TNS3-204ENST00000428457 ZNF804AQ7Z570 1209 aa11.46□□□□□ -0.57
TNS3-204ENST00000428457 LRRC2Q9BYS8 371 aa11.46□□□□□ -0.57
TNS3-204ENST00000428457 MAATS1Q7Z4T9 603 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 GOPCQ9HD26 462 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 JADE2Q9NQC1 790 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 IL16Q14005 1332 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 B4DLN1 442 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 MRPL12P52815 198 aaKnown RBP11.46□□□□□ -0.58
TNS3-204ENST00000428457 SPECC1Q5M775 1068 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 KRBA2Q6ZNG9 492 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 NPATQ14207 1427 aa11.46□□□□□ -0.58
TNS3-204ENST00000428457 ABCC1P33527 1531 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
TNS3-204ENST00000428457 ECHDC1Q9NTX5 307 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 CEP131Q9UPN4 1083 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 LDHAL6AQ6ZMR3 332 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 NAPBQ9H115 298 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.45□□□□□ -0.58
TNS3-204ENST00000428457 RALGAPBQ86X10 1494 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 DESP17661 470 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 FLIIQ13045 1269 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 WDR78Q5VTH9 848 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 BRF1Q92994 677 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 PRAG1Q86YV5 1406 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 CTAGE15A4D2H0 777 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 CTAGE8P0CG41 777 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 CTAGE6Q86UF2 777 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 IQCA1Q86XH1 822 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 CTAGE4Q8IX94 777 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 TRPC5Q9UL62 973 aaPredicted RBP11.45□□□□□ -0.58
TNS3-204ENST00000428457 TMEM2Q9UHN6 1383 aa11.45□□□□□ -0.58
TNS3-204ENST00000428457 PIK3C2GO75747 1445 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 YTHDC2Q9H6S0 1430 aaKnown RBP11.44□□□□□ -0.58
TNS3-204ENST00000428457 CACNA2D4Q7Z3S7 1137 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 CCDC144CPQ8IYA2 1237 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 PAF1Q8N7H5 531 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 IP6K1Q92551 441 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 PUF60Q9UHX1 559 aaKnown RBP11.44□□□□□ -0.58
TNS3-204ENST00000428457 CCNL1Q9UK58 526 aaPredicted RBP11.44□□□□□ -0.58
TNS3-204ENST00000428457 GBP2P32456 591 aaPredicted RBP11.44□□□□□ -0.58
TNS3-204ENST00000428457 KARSQ15046 597 aaKnown RBP11.44□□□□□ -0.58
TNS3-204ENST00000428457 TDRD12Q587J7 1177 aaKnown RBP11.44□□□□□ -0.58
TNS3-204ENST00000428457 ANKRD13DQ6ZTN6 518 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 SUPT20HQ8NEM7 779 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
TNS3-204ENST00000428457 CCDC175P0C221 793 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 EVI5LQ96CN4 794 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.44□□□□□ -0.58
TNS3-204ENST00000428457 ZFYVE9O95405 1425 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 TNNI2P48788 182 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 ZNF445P59923 1031 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 ELF2Q15723 593 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 FKBP15Q5T1M5 1219 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 NEK1Q96PY6 1258 aa11.44□□□□□ -0.58
TNS3-204ENST00000428457 NIP7Q9Y221 180 aaKnown RBP eCLIP11.44□□□□□ -0.58
TNS3-204ENST00000428457 YEATS2Q9ULM3 1422 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 USO1O60763 962 aaKnown RBP11.43□□□□□ -0.58
TNS3-204ENST00000428457 PDE6BP35913 854 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 SIRT1Q96EB6 747 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 HOOK2Q96ED9 719 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 BCL2L12Q9HB09 334 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 ORC3Q9UBD5 711 aaPredicted RBP11.43□□□□□ -0.58
TNS3-204ENST00000428457 USP16Q9Y5T5 823 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 DTNBO60941 627 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 HMGB1P09429 215 aaKnown RBP11.43□□□□□ -0.58
TNS3-204ENST00000428457 TMEM87AQ8NBN3 555 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 RHOXF2BP0C7M4 288 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 TERF1P54274 439 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 AK2P54819 239 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 HAND2P61296 217 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 DNAJC21Q5F1R6 531 aaKnown RBP11.43□□□□□ -0.58
TNS3-204ENST00000428457 GAS2L3Q86XJ1 694 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 DZIP3Q86Y13 1208 aaKnown RBP11.43□□□□□ -0.58
TNS3-204ENST00000428457 CTCFLQ8NI51 663 aaPredicted RBP11.43□□□□□ -0.58
TNS3-204ENST00000428457 GOLGA1Q92805 767 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 RHOXF2Q9BQY4 288 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 ZC3H12CQ9C0D7 883 aaKnown RBP11.43□□□□□ -0.58
TNS3-204ENST00000428457 PDE4BQ07343 736 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 CEP57Q86XR8 500 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 ATRIPQ8WXE1 791 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 BEGAINQ9BUH8 593 aa11.43□□□□□ -0.58
TNS3-204ENST00000428457 ANAPC15P60006 121 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms