RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 H7C1W4 665 aa34.86■■■■□ 3.17
LMO1-202ENST00000428101 ECE2O60344 883 aa34.86■■■■□ 3.17
LMO1-202ENST00000428101 ANKRD18AQ8IVF6 992 aa34.86■■■■□ 3.17
LMO1-202ENST00000428101 KCNQ5Q9NR82 932 aa34.86■■■■□ 3.17
LMO1-202ENST00000428101 ANKIB1Q9P2G1 1089 aa34.86■■■■□ 3.17
LMO1-202ENST00000428101 CNOT7Q9UIV1 285 aaKnown RBP34.86■■■■□ 3.17
LMO1-202ENST00000428101 ZBTB12Q9Y330 459 aaPredicted RBP34.86■■■■□ 3.17
LMO1-202ENST00000428101 HIRAP54198 1017 aaPredicted RBP34.85■■■■□ 3.17
LMO1-202ENST00000428101 FKBP5Q13451 457 aaPredicted RBP34.85■■■■□ 3.17
LMO1-202ENST00000428101 TRPM7Q96QT4 1865 aa34.84■■■■□ 3.17
LMO1-202ENST00000428101 SCN9AQ15858 1988 aa34.84■■■■□ 3.17
LMO1-202ENST00000428101 UFL1O94874 794 aa34.84■■■■□ 3.17
LMO1-202ENST00000428101 VEGFBP49765 207 aa34.84■■■■□ 3.17
LMO1-202ENST00000428101 DNAAF4Q8WXU2 420 aa34.84■■■■□ 3.17
LMO1-202ENST00000428101 PGAP2Q9UHJ9 254 aa34.84■■■■□ 3.17
LMO1-202ENST00000428101 GGA1Q9UJY5 639 aa34.84■■■■□ 3.17
LMO1-202ENST00000428101 TRAF5O00463 557 aa34.83■■■■□ 3.17
LMO1-202ENST00000428101 GCKRQ14397 625 aa34.83■■■■□ 3.17
LMO1-202ENST00000428101 COL13A1Q5TAT6 717 aaPredicted RBP34.83■■■■□ 3.17
LMO1-202ENST00000428101 UBE3BQ7Z3V4 1068 aa34.83■■■■□ 3.17
LMO1-202ENST00000428101 TRPM4Q8TD43 1214 aa34.83■■■■□ 3.17
LMO1-202ENST00000428101 ZC3H12CQ9C0D7 883 aaKnown RBP34.83■■■■□ 3.17
LMO1-202ENST00000428101 GREM2Q9H772 168 aa34.83■■■■□ 3.17
LMO1-202ENST00000428101 RTL9Q8NET4 1388 aa34.83■■■■□ 3.17
LMO1-202ENST00000428101 RASSF10A6NK89 507 aa34.82■■■■□ 3.16
LMO1-202ENST00000428101 MICALL2Q8IY33 904 aa34.82■■■■□ 3.16
LMO1-202ENST00000428101 DPF2Q92785 391 aa34.82■■■■□ 3.16
LMO1-202ENST00000428101 CDC5LQ99459 802 aaKnown RBP34.81■■■■□ 3.16
LMO1-202ENST00000428101 CASP7P55210 303 aa34.8■■■■□ 3.16
LMO1-202ENST00000428101 CST9Q5W186 159 aa34.8■■■■□ 3.16
LMO1-202ENST00000428101 SPEF2Q9C093 1822 aa34.8■■■■□ 3.16
LMO1-202ENST00000428101 H7C1D1 291 aa34.79■■■■□ 3.16
LMO1-202ENST00000428101 DEFB115Q30KQ5 88 aa34.79■■■■□ 3.16
LMO1-202ENST00000428101 LINS1Q8NG48 757 aa34.79■■■■□ 3.16
LMO1-202ENST00000428101 ZC3H15Q8WU90 426 aaKnown RBP34.79■■■■□ 3.16
LMO1-202ENST00000428101 PLA2G12BQ9BX93 195 aa34.79■■■■□ 3.16
LMO1-202ENST00000428101 MYH16Q9H6N6 1097 aa34.79■■■■□ 3.16
LMO1-202ENST00000428101 XDHP47989 1333 aa34.79■■■■□ 3.16
LMO1-202ENST00000428101 BSDC1Q9NW68 430 aaPredicted RBP34.78■■■■□ 3.16
LMO1-202ENST00000428101 ABT1Q9ULW3 272 aaKnown RBP34.78■■■■□ 3.16
LMO1-202ENST00000428101 RPS12P25398 132 aaKnown RBP34.76■■■■□ 3.16
LMO1-202ENST00000428101 GLIS2Q9BZE0 524 aaPredicted RBP34.76■■■■□ 3.16
LMO1-202ENST00000428101 MINPP1Q9UNW1 487 aa34.76■■■■□ 3.16
LMO1-202ENST00000428101 ZNF521Q96K83 1311 aa34.76■■■■□ 3.15
LMO1-202ENST00000428101 WTIPA6NIX2 430 aaPredicted RBP34.75■■■■□ 3.15
LMO1-202ENST00000428101 VIL1P09327 827 aaKnown RBP34.75■■■■□ 3.15
LMO1-202ENST00000428101 ATP2B4P23634 1241 aa34.75■■■■□ 3.15
LMO1-202ENST00000428101 SAMD7Q7Z3H4 446 aa34.75■■■■□ 3.15
LMO1-202ENST00000428101 F6X3S4 739 aa34.73■■■■□ 3.15
LMO1-202ENST00000428101 EGFRP00533 1210 aa34.73■■■■□ 3.15
LMO1-202ENST00000428101 PSME4Q14997 1843 aa34.72■■■■□ 3.15
LMO1-202ENST00000428101 G3V3G9 751 aa34.72■■■■□ 3.15
LMO1-202ENST00000428101 CSF1RP07333 972 aa34.72■■■■□ 3.15
LMO1-202ENST00000428101 DCAF8Q5TAQ9 597 aa34.72■■■■□ 3.15
LMO1-202ENST00000428101 POLR2AP24928 1970 aaKnown RBP34.72■■■■□ 3.15
LMO1-202ENST00000428101 TBC1D10BQ4KMP7 808 aaPredicted RBP34.71■■■■□ 3.15
LMO1-202ENST00000428101 BEND3Q5T5X7 828 aa34.71■■■■□ 3.15
LMO1-202ENST00000428101 WDR33Q9C0J8 1336 aaKnown RBP34.71■■■■□ 3.15
LMO1-202ENST00000428101 ITGA6P23229 1130 aa34.7■■■■□ 3.15
LMO1-202ENST00000428101 FAM161AQ3B820 660 aa34.7■■■■□ 3.15
LMO1-202ENST00000428101 CDC37L1Q7L3B6 337 aa34.7■■■■□ 3.15
LMO1-202ENST00000428101 CELF2O95319 508 aaKnown RBP34.69■■■■□ 3.14
LMO1-202ENST00000428101 TLL2Q9Y6L7 1015 aa34.69■■■■□ 3.14
LMO1-202ENST00000428101 IGHMBP2P38935 993 aaKnown RBP34.68■■■■□ 3.14
LMO1-202ENST00000428101 FOXN1O15353 648 aa34.67■■■■□ 3.14
LMO1-202ENST00000428101 CCT4P50991 539 aaKnown RBP34.67■■■■□ 3.14
LMO1-202ENST00000428101 MED23Q9ULK4 1368 aa34.66■■■■□ 3.14
LMO1-202ENST00000428101 RBM26Q5T8P6 1007 aaKnown RBP34.66■■■■□ 3.14
LMO1-202ENST00000428101 RSBN1LQ6PCB5 846 aaPredicted RBP34.66■■■■□ 3.14
LMO1-202ENST00000428101 WBP1LQ9NX94 342 aa34.66■■■■□ 3.14
LMO1-202ENST00000428101 ZNF609O15014 1411 aa34.65■■■■□ 3.14
LMO1-202ENST00000428101 PODNQ7Z5L7 613 aa34.65■■■■□ 3.14
LMO1-202ENST00000428101 USP48Q86UV5 1035 aa34.65■■■■□ 3.14
LMO1-202ENST00000428101 FOXO4P98177 505 aa34.64■■■■□ 3.14
LMO1-202ENST00000428101 AGBL3Q8NEM8 1001 aa34.64■■■■□ 3.14
LMO1-202ENST00000428101 CAPNS2Q96L46 248 aa34.64■■■■□ 3.14
LMO1-202ENST00000428101 KIF4BQ2VIQ3 1234 aa34.63■■■■□ 3.13
LMO1-202ENST00000428101 CYP4F22Q6NT55 531 aa34.63■■■■□ 3.13
LMO1-202ENST00000428101 DLK2Q6UY11 383 aa34.63■■■■□ 3.13
LMO1-202ENST00000428101 SAPCD2Q86UD0 394 aa34.63■■■■□ 3.13
LMO1-202ENST00000428101 GMLQ99445 158 aa34.63■■■■□ 3.13
LMO1-202ENST00000428101 MPHOSPH8Q99549 860 aa34.62■■■■□ 3.13
LMO1-202ENST00000428101 LEMD3Q9Y2U8 911 aa34.62■■■■□ 3.13
LMO1-202ENST00000428101 USP17L3A6NCW0 530 aa34.61■■■■□ 3.13
LMO1-202ENST00000428101 USP17L4A6NCW7 530 aa34.61■■■■□ 3.13
LMO1-202ENST00000428101 ZNF280AP59817 542 aaPredicted RBP34.61■■■■□ 3.13
LMO1-202ENST00000428101 PAXIP1Q6ZW49 1069 aaPredicted RBP34.61■■■■□ 3.13
LMO1-202ENST00000428101 USP17L1Q7RTZ2 530 aa34.61■■■■□ 3.13
LMO1-202ENST00000428101 TXNRD3Q86VQ6 643 aa34.61■■■■□ 3.13
LMO1-202ENST00000428101 ZNF408Q9H9D4 720 aa34.61■■■■□ 3.13
LMO1-202ENST00000428101 THSD7BQ9C0I4 1608 aa34.6■■■■□ 3.13
LMO1-202ENST00000428101 ECE1P42892 770 aa34.6■■■■□ 3.13
LMO1-202ENST00000428101 KRT26Q7Z3Y9 468 aa34.6■■■■□ 3.13
LMO1-202ENST00000428101 TNS4Q8IZW8 715 aa34.6■■■■□ 3.13
LMO1-202ENST00000428101 AIDAQ96BJ3 306 aa34.6■■■■□ 3.13
LMO1-202ENST00000428101 ANKRD18BA2A2Z9 1011 aa34.59■■■■□ 3.13
LMO1-202ENST00000428101 ANKRD2Q9GZV1 360 aa34.59■■■■□ 3.13
LMO1-202ENST00000428101 ZNF646O15015 1829 aaPredicted RBP34.59■■■■□ 3.13
LMO1-202ENST00000428101 ZNF804BA4D1E1 1349 aa34.58■■■■□ 3.13
LMO1-202ENST00000428101 EPHA10Q5JZY3 1008 aa34.58■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms