RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 STK31Q9BXU1 1019 aa21.74■■□□□ 1.07
LIMS2-211ENST00000426981 ATP6V0A2Q9Y487 856 aa21.74■■□□□ 1.07
LIMS2-211ENST00000426981 IGKV5-2P06315 115 aa21.73■■□□□ 1.07
LIMS2-211ENST00000426981 DDX46Q7L014 1031 aaKnown RBP21.73■■□□□ 1.07
LIMS2-211ENST00000426981 RBM46Q8TBY0 533 aaKnown RBP21.73■■□□□ 1.07
LIMS2-211ENST00000426981 GRAPQ13588 217 aa21.72■■□□□ 1.07
LIMS2-211ENST00000426981 CC2D2BQ6DHV5 1058 aa21.72■■□□□ 1.07
LIMS2-211ENST00000426981 KSR2Q6VAB6 950 aa21.72■■□□□ 1.07
LIMS2-211ENST00000426981 GRAPLQ8TC17 118 aaPredicted RBP21.72■■□□□ 1.07
LIMS2-211ENST00000426981 CELF1Q92879 486 aaKnown RBP21.72■■□□□ 1.07
LIMS2-211ENST00000426981 NOB1Q9ULX3 412 aaKnown RBP21.72■■□□□ 1.07
LIMS2-211ENST00000426981 DDX58O95786 925 aaKnown RBP21.72■■□□□ 1.07
LIMS2-211ENST00000426981 MFAP1P55081 439 aaKnown RBP21.72■■□□□ 1.07
LIMS2-211ENST00000426981 ZBTB38Q8NAP3 1195 aaPredicted RBP21.72■■□□□ 1.07
LIMS2-211ENST00000426981 TRAK2O60296 914 aa21.71■■□□□ 1.07
LIMS2-211ENST00000426981 POTEIP0CG38 1075 aa21.71■■□□□ 1.07
LIMS2-211ENST00000426981 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
LIMS2-211ENST00000426981 SF3B3Q15393 1217 aaKnown RBP21.71■■□□□ 1.07
LIMS2-211ENST00000426981 CWF19L2Q2TBE0 894 aaKnown RBP21.71■■□□□ 1.07
LIMS2-211ENST00000426981 CCDC191Q8NCU4 936 aa21.71■■□□□ 1.07
LIMS2-211ENST00000426981 CWC25Q9NXE8 425 aaPredicted RBP21.71■■□□□ 1.07
LIMS2-211ENST00000426981 TNNQ9UQP3 1299 aa21.71■■□□□ 1.07
LIMS2-211ENST00000426981 FZD9O00144 591 aa21.7■■□□□ 1.06
LIMS2-211ENST00000426981 BBOX1O75936 387 aa21.7■■□□□ 1.06
LIMS2-211ENST00000426981 HTRA3P83110 453 aa21.7■■□□□ 1.06
LIMS2-211ENST00000426981 CHD1LQ86WJ1 897 aa21.7■■□□□ 1.06
LIMS2-211ENST00000426981 SP8Q8IXZ3 490 aa21.7■■□□□ 1.06
LIMS2-211ENST00000426981 CCDC85AQ96PX6 553 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-211ENST00000426981 SEC31BQ9NQW1 1179 aa21.7■■□□□ 1.06
LIMS2-211ENST00000426981 PCCAP05165 728 aaPredicted RBP21.69■■□□□ 1.06
LIMS2-211ENST00000426981 DDIT3P35638 169 aa21.69■■□□□ 1.06
LIMS2-211ENST00000426981 FLIIQ13045 1269 aa21.69■■□□□ 1.06
LIMS2-211ENST00000426981 AOC3Q16853 763 aa21.69■■□□□ 1.06
LIMS2-211ENST00000426981 TMEM57Q8N5G2 664 aa21.69■■□□□ 1.06
LIMS2-211ENST00000426981 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
LIMS2-211ENST00000426981 LARGE2Q8N3Y3 721 aa21.68■■□□□ 1.06
LIMS2-211ENST00000426981 PPIP5K2O43314 1243 aa21.66■■□□□ 1.06
LIMS2-211ENST00000426981 DPP8Q6V1X1 898 aaPredicted RBP21.66■■□□□ 1.06
LIMS2-211ENST00000426981 MPNDQ8N594 471 aa21.66■■□□□ 1.06
LIMS2-211ENST00000426981 JDP2Q8WYK2 163 aa21.66■■□□□ 1.06
LIMS2-211ENST00000426981 NEURL1BA8MQ27 555 aa21.65■■□□□ 1.06
LIMS2-211ENST00000426981 CLCN1P35523 988 aa21.65■■□□□ 1.06
LIMS2-211ENST00000426981 FSTL1Q12841 308 aa21.65■■□□□ 1.06
LIMS2-211ENST00000426981 FKBP5Q13451 457 aaPredicted RBP21.65■■□□□ 1.06
LIMS2-211ENST00000426981 API5Q9BZZ5 524 aaKnown RBP21.65■■□□□ 1.06
LIMS2-211ENST00000426981 DUOX1Q9NRD9 1551 aa21.65■■□□□ 1.06
LIMS2-211ENST00000426981 F6X3S4 739 aa21.64■■□□□ 1.06
LIMS2-211ENST00000426981 GOLGA6L22H0YM25 854 aa21.64■■□□□ 1.06
LIMS2-211ENST00000426981 GRIPAP1Q4V328 841 aa21.64■■□□□ 1.06
LIMS2-211ENST00000426981 SMC1BQ8NDV3 1235 aa21.64■■□□□ 1.06
LIMS2-211ENST00000426981 L3MBTL3Q96JM7 780 aaPredicted RBP21.64■■□□□ 1.06
LIMS2-211ENST00000426981 RTFDC1Q9BY42 306 aaPredicted RBP21.64■■□□□ 1.06
LIMS2-211ENST00000426981 TMX4Q9H1E5 349 aaPredicted RBP21.64■■□□□ 1.06
LIMS2-211ENST00000426981 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.06
LIMS2-211ENST00000426981 LRRC37AA6NMS7 1700 aa21.64■■□□□ 1.05
LIMS2-211ENST00000426981 CACNA1FO60840 1977 aa21.64■■□□□ 1.05
LIMS2-211ENST00000426981 PDE8AO60658 829 aa21.63■■□□□ 1.05
LIMS2-211ENST00000426981 XRCC6P12956 609 aaKnown RBP eCLIP21.63■■□□□ 1.05
LIMS2-211ENST00000426981 RPS8P62241 208 aaKnown RBP21.63■■□□□ 1.05
LIMS2-211ENST00000426981 GPSM2P81274 684 aa21.63■■□□□ 1.05
LIMS2-211ENST00000426981 NEXNQ0ZGT2 675 aa21.63■■□□□ 1.05
LIMS2-211ENST00000426981 CLEC17AQ6ZS10 378 aa21.63■■□□□ 1.05
LIMS2-211ENST00000426981 GPR101Q96P66 508 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-211ENST00000426981 TAF1DQ9H5J8 278 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-211ENST00000426981 LTBP1Q14766 1721 aa21.62■■□□□ 1.05
LIMS2-211ENST00000426981 APLP1P51693 650 aa21.62■■□□□ 1.05
LIMS2-211ENST00000426981 NIM1KQ8IY84 436 aa21.62■■□□□ 1.05
LIMS2-211ENST00000426981 DNAAF4Q8WXU2 420 aa21.62■■□□□ 1.05
LIMS2-211ENST00000426981 NSFL1CQ9UNZ2 370 aaKnown RBP21.62■■□□□ 1.05
LIMS2-211ENST00000426981 SCN4AP35499 1836 aa21.62■■□□□ 1.05
LIMS2-211ENST00000426981 CDHR2Q9BYE9 1310 aa21.61■■□□□ 1.05
LIMS2-211ENST00000426981 EIF6P56537 245 aaKnown RBP21.61■■□□□ 1.05
LIMS2-211ENST00000426981 RAB3GAP1Q15042 981 aa21.61■■□□□ 1.05
LIMS2-211ENST00000426981 UBE3BQ7Z3V4 1068 aa21.61■■□□□ 1.05
LIMS2-211ENST00000426981 POLLQ9UGP5 575 aa21.61■■□□□ 1.05
LIMS2-211ENST00000426981 H7C1W4 665 aa21.6■■□□□ 1.05
LIMS2-211ENST00000426981 GPC2Q8N158 579 aa21.6■■□□□ 1.05
LIMS2-211ENST00000426981 ZBTB7BO15156 539 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-211ENST00000426981 CTSWP56202 376 aa21.59■■□□□ 1.05
LIMS2-211ENST00000426981 KIAA2012Q0VF49 1180 aa21.59■■□□□ 1.05
LIMS2-211ENST00000426981 GCKRQ14397 625 aa21.59■■□□□ 1.05
LIMS2-211ENST00000426981 CCDC152Q4G0S7 254 aa21.59■■□□□ 1.05
LIMS2-211ENST00000426981 EAPPQ56P03 285 aaPredicted RBP21.59■■□□□ 1.05
LIMS2-211ENST00000426981 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
LIMS2-211ENST00000426981 DNAJC5GQ8N7S2 189 aa21.59■■□□□ 1.05
LIMS2-211ENST00000426981 SUPT20HQ8NEM7 779 aa21.59■■□□□ 1.05
LIMS2-211ENST00000426981 HACL1Q9UJ83 578 aa21.59■■□□□ 1.05
LIMS2-211ENST00000426981 IQCA1LA6NCM1 817 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 YDJCA8MPS7 323 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 RIMBP2O15034 1052 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 CDC45O75419 566 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 EPHX2P34913 555 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 CASP7P55210 303 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 CXCL9Q07325 125 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 TTLL11Q8NHH1 800 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 GREM2Q9H772 168 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 GRPEL1Q9HAV7 217 aa21.58■■□□□ 1.05
LIMS2-211ENST00000426981 MYH3P11055 1940 aa21.58■■□□□ 1.04
LIMS2-211ENST00000426981 K7ELQ4 463 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms