RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 PUS3Q9BZE2 481 aaKnown RBP15.7■□□□□ 0.1
SMIM12-203ENST00000426886 CNNM1Q9NRU3 951 aa15.7■□□□□ 0.1
SMIM12-203ENST00000426886 LTBP3Q9NS15 1303 aa15.69■□□□□ 0.1
SMIM12-203ENST00000426886 SNAP23O00161 211 aa15.69■□□□□ 0.1
SMIM12-203ENST00000426886 RABL6Q3YEC7 729 aaPredicted RBP15.69■□□□□ 0.1
SMIM12-203ENST00000426886 ZNF784Q8NCA9 323 aaPredicted RBP15.69■□□□□ 0.1
SMIM12-203ENST00000426886 RTL9Q8NET4 1388 aa15.69■□□□□ 0.1
SMIM12-203ENST00000426886 TAF5LO75529 589 aa15.69■□□□□ 0.1
SMIM12-203ENST00000426886 UFL1O94874 794 aa15.69■□□□□ 0.1
SMIM12-203ENST00000426886 WASHC4Q2M389 1173 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.68■□□□□ 0.1
SMIM12-203ENST00000426886 TBC1D16Q8TBP0 767 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 JDP2Q8WYK2 163 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 CHD4Q14839 1912 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 SNED1Q8TER0 1413 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 GNAI2P04899 355 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 GRIPAP1Q4V328 841 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 GGA1Q9UJY5 639 aa15.68■□□□□ 0.1
SMIM12-203ENST00000426886 CHRNDQ07001 517 aa15.67■□□□□ 0.1
SMIM12-203ENST00000426886 SIL1Q9H173 461 aa15.67■□□□□ 0.1
SMIM12-203ENST00000426886 FER1L6Q2WGJ9 1857 aa15.67■□□□□ 0.1
SMIM12-203ENST00000426886 ZBTB7BO15156 539 aaPredicted RBP15.67■□□□□ 0.1
SMIM12-203ENST00000426886 LRRC24Q50LG9 513 aa15.67■□□□□ 0.1
SMIM12-203ENST00000426886 SUPT20HQ8NEM7 779 aa15.67■□□□□ 0.1
SMIM12-203ENST00000426886 MYH3P11055 1940 aa15.67■□□□□ 0.1
SMIM12-203ENST00000426886 XDHP47989 1333 aa15.67■□□□□ 0.1
SMIM12-203ENST00000426886 MS4A1P11836 297 aa15.66■□□□□ 0.1
SMIM12-203ENST00000426886 DOK7Q18PE1 504 aa15.66■□□□□ 0.1
SMIM12-203ENST00000426886 RTFDC1Q9BY42 306 aaPredicted RBP15.66■□□□□ 0.1
SMIM12-203ENST00000426886 PA2G4Q9UQ80 394 aaKnown RBP15.66■□□□□ 0.1
SMIM12-203ENST00000426886 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
SMIM12-203ENST00000426886 SRGAP3O43295 1099 aa15.66■□□□□ 0.1
SMIM12-203ENST00000426886 DBNDD1Q9H9R9 158 aa15.66■□□□□ 0.1
SMIM12-203ENST00000426886 KCNJ4P48050 445 aa15.65■□□□□ 0.1
SMIM12-203ENST00000426886 MVPQ14764 893 aaKnown RBP15.65■□□□□ 0.1
SMIM12-203ENST00000426886 ZC3H12CQ9C0D7 883 aaKnown RBP15.65■□□□□ 0.1
SMIM12-203ENST00000426886 GPBP1L1Q9HC44 474 aaPredicted RBP15.65■□□□□ 0.1
SMIM12-203ENST00000426886 DDNO94850 711 aaPredicted RBP15.65■□□□□ 0.1
SMIM12-203ENST00000426886 NIM1KQ8IY84 436 aa15.65■□□□□ 0.1
SMIM12-203ENST00000426886 PODXL2Q9NZ53 605 aa15.65■□□□□ 0.1
SMIM12-203ENST00000426886 SBF1O95248 1867 aa15.65■□□□□ 0.1
SMIM12-203ENST00000426886 G3V3G9 751 aa15.64■□□□□ 0.1
SMIM12-203ENST00000426886 KIAA2012Q0VF49 1180 aa15.64■□□□□ 0.1
SMIM12-203ENST00000426886 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.1
SMIM12-203ENST00000426886 DPY19L2Q6NUT2 758 aa15.64■□□□□ 0.1
SMIM12-203ENST00000426886 CCDC88AQ3V6T2 1871 aa15.64■□□□□ 0.09
SMIM12-203ENST00000426886 RFX5P48382 616 aaPredicted RBP15.64■□□□□ 0.09
SMIM12-203ENST00000426886 PTPN12Q05209 780 aaKnown RBP15.64■□□□□ 0.09
SMIM12-203ENST00000426886 GJA3Q9Y6H8 435 aa15.64■□□□□ 0.09
SMIM12-203ENST00000426886 PNMA6EA0A0J9YXQ4 647 aa15.64■□□□□ 0.09
SMIM12-203ENST00000426886 KLRK1P26718 216 aa15.64■□□□□ 0.09
SMIM12-203ENST00000426886 EYA3Q99504 573 aa15.64■□□□□ 0.09
SMIM12-203ENST00000426886 ANKRD2Q9GZV1 360 aa15.64■□□□□ 0.09
SMIM12-203ENST00000426886 ZNF541Q9H0D2 1346 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 ATP2B4P23634 1241 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 RRP1P56182 461 aaKnown RBP15.63■□□□□ 0.09
SMIM12-203ENST00000426886 TXNRD3Q86VQ6 643 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 NMRK2Q9NPI5 230 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 KCNQ5Q9NR82 932 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 ZNF804BA4D1E1 1349 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 COL4A5P29400 1685 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 RAD17O75943 681 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 METTL24Q5JXM2 366 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 RIPOR2Q9Y4F9 1068 aa15.63■□□□□ 0.09
SMIM12-203ENST00000426886 GLTPD2A6NH11 291 aa15.62■□□□□ 0.09
SMIM12-203ENST00000426886 EIF6P56537 245 aaKnown RBP15.62■□□□□ 0.09
SMIM12-203ENST00000426886 PDE3AQ14432 1141 aa15.62■□□□□ 0.09
SMIM12-203ENST00000426886 RRAGCQ9HB90 399 aa15.62■□□□□ 0.09
SMIM12-203ENST00000426886 DDX19BQ9UMR2 479 aa15.62■□□□□ 0.09
SMIM12-203ENST00000426886 SPEF2Q9C093 1822 aa15.62■□□□□ 0.09
SMIM12-203ENST00000426886 FZD9O00144 591 aa15.62■□□□□ 0.09
SMIM12-203ENST00000426886 DUOX1Q9NRD9 1551 aa15.61■□□□□ 0.09
SMIM12-203ENST00000426886 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
SMIM12-203ENST00000426886 LEMD3Q9Y2U8 911 aa15.61■□□□□ 0.09
SMIM12-203ENST00000426886 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
SMIM12-203ENST00000426886 EYA2O00167 538 aa15.61■□□□□ 0.09
SMIM12-203ENST00000426886 KDM2BQ8NHM5 1336 aa15.6■□□□□ 0.09
SMIM12-203ENST00000426886 YDJCA8MPS7 323 aa15.6■□□□□ 0.09
SMIM12-203ENST00000426886 ECE2O60344 883 aa15.6■□□□□ 0.09
SMIM12-203ENST00000426886 CXCL9Q07325 125 aa15.6■□□□□ 0.09
SMIM12-203ENST00000426886 VPS33BQ9H267 617 aa15.6■□□□□ 0.09
SMIM12-203ENST00000426886 LRRC37AA6NMS7 1700 aa15.59■□□□□ 0.09
SMIM12-203ENST00000426886 MROH5Q6ZUA9 1318 aa15.59■□□□□ 0.09
SMIM12-203ENST00000426886 ATP8B2P98198 1209 aa15.59■□□□□ 0.09
SMIM12-203ENST00000426886 ATG9AQ7Z3C6 839 aa15.59■□□□□ 0.09
SMIM12-203ENST00000426886 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
SMIM12-203ENST00000426886 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
SMIM12-203ENST00000426886 ZC3H4Q9UPT8 1303 aaKnown RBP15.58■□□□□ 0.09
SMIM12-203ENST00000426886 MTX1Q13505 466 aa15.58■□□□□ 0.08
SMIM12-203ENST00000426886 PDE8BO95263 885 aa15.58■□□□□ 0.08
SMIM12-203ENST00000426886 COPRSQ9NQ92 184 aa15.58■□□□□ 0.08
SMIM12-203ENST00000426886 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
SMIM12-203ENST00000426886 CEP85Q6P2H3 762 aa15.57■□□□□ 0.08
SMIM12-203ENST00000426886 CIAPIN1Q6FI81 312 aa15.57■□□□□ 0.08
SMIM12-203ENST00000426886 CEP126Q9P2H0 1117 aa15.57■□□□□ 0.08
SMIM12-203ENST00000426886 PSMD14O00487 310 aa15.56■□□□□ 0.08
SMIM12-203ENST00000426886 SURF6O75683 361 aaKnown RBP15.56■□□□□ 0.08
SMIM12-203ENST00000426886 GYG1P46976 350 aa15.56■□□□□ 0.08
SMIM12-203ENST00000426886 CRBNQ96SW2 442 aa15.56■□□□□ 0.08
SMIM12-203ENST00000426886 TSHZ2Q9NRE2 1034 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms