RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 PTPN12Q05209 780 aaKnown RBP30.55■■■□□ 2.48
VEGFA-209ENST00000425836 RTFDC1Q9BY42 306 aaPredicted RBP30.55■■■□□ 2.48
VEGFA-209ENST00000425836 PUS3Q9BZE2 481 aaKnown RBP30.55■■■□□ 2.48
VEGFA-209ENST00000425836 PODXL2Q9NZ53 605 aa30.55■■■□□ 2.48
VEGFA-209ENST00000425836 ZNF277Q9NRM2 450 aaPredicted RBP30.54■■■□□ 2.48
VEGFA-209ENST00000425836 ANKIB1Q9P2G1 1089 aa30.54■■■□□ 2.48
VEGFA-209ENST00000425836 PNMA6EA0A0J9YXQ4 647 aa30.54■■■□□ 2.48
VEGFA-209ENST00000425836 ATP8B2P98198 1209 aa30.54■■■□□ 2.48
VEGFA-209ENST00000425836 CNNM1Q9NRU3 951 aa30.54■■■□□ 2.48
VEGFA-209ENST00000425836 LMNB1P20700 586 aa30.53■■■□□ 2.48
VEGFA-209ENST00000425836 CRBNQ96SW2 442 aa30.53■■■□□ 2.48
VEGFA-209ENST00000425836 LRRC37AA6NMS7 1700 aa30.52■■■□□ 2.48
VEGFA-209ENST00000425836 XDHP47989 1333 aa30.52■■■□□ 2.48
VEGFA-209ENST00000425836 CHRNDQ07001 517 aa30.52■■■□□ 2.48
VEGFA-209ENST00000425836 C9orf131Q5VYM1 1079 aa30.52■■■□□ 2.48
VEGFA-209ENST00000425836 POLLQ9UGP5 575 aa30.52■■■□□ 2.48
VEGFA-209ENST00000425836 RIPOR2Q9Y4F9 1068 aa30.52■■■□□ 2.48
VEGFA-209ENST00000425836 LRRC24Q50LG9 513 aa30.51■■■□□ 2.47
VEGFA-209ENST00000425836 CEP85Q6P2H3 762 aa30.51■■■□□ 2.47
VEGFA-209ENST00000425836 SUPT20HQ8NEM7 779 aa30.51■■■□□ 2.47
VEGFA-209ENST00000425836 FER1L6Q2WGJ9 1857 aa30.51■■■□□ 2.47
VEGFA-209ENST00000425836 TBC1D16Q8TBP0 767 aa30.5■■■□□ 2.47
VEGFA-209ENST00000425836 ANKRD2Q9GZV1 360 aa30.5■■■□□ 2.47
VEGFA-209ENST00000425836 COPRSQ9NQ92 184 aa30.5■■■□□ 2.47
VEGFA-209ENST00000425836 PA2G4Q9UQ80 394 aaKnown RBP30.5■■■□□ 2.47
VEGFA-209ENST00000425836 POLA2Q14181 598 aa30.49■■■□□ 2.47
VEGFA-209ENST00000425836 RNF181Q9P0P0 153 aa30.49■■■□□ 2.47
VEGFA-209ENST00000425836 GGA1Q9UJY5 639 aa30.49■■■□□ 2.47
VEGFA-209ENST00000425836 C6orf229H3BNL8 230 aa30.49■■■□□ 2.47
VEGFA-209ENST00000425836 HELBQ8NG08 1087 aaPredicted RBP30.49■■■□□ 2.47
VEGFA-209ENST00000425836 WTIPA6NIX2 430 aaPredicted RBP30.48■■■□□ 2.47
VEGFA-209ENST00000425836 EYA2O00167 538 aa30.48■■■□□ 2.47
VEGFA-209ENST00000425836 UFL1O94874 794 aa30.48■■■□□ 2.47
VEGFA-209ENST00000425836 IARSP41252 1262 aaKnown RBP30.48■■■□□ 2.47
VEGFA-209ENST00000425836 SSH3Q8TE77 659 aa30.48■■■□□ 2.47
VEGFA-209ENST00000425836 DUOX1Q9NRD9 1551 aa30.47■■■□□ 2.47
VEGFA-209ENST00000425836 ATP2B4P23634 1241 aa30.47■■■□□ 2.47
VEGFA-209ENST00000425836 SIL1Q9H173 461 aa30.47■■■□□ 2.47
VEGFA-209ENST00000425836 TAF5LO75529 589 aa30.46■■■□□ 2.47
VEGFA-209ENST00000425836 VPS33BQ9H267 617 aa30.46■■■□□ 2.47
VEGFA-209ENST00000425836 FBXO3Q9UK99 471 aa30.46■■■□□ 2.47
VEGFA-209ENST00000425836 MROH5Q6ZUA9 1318 aa30.46■■■□□ 2.47
VEGFA-209ENST00000425836 ATG9AQ7Z3C6 839 aa30.45■■■□□ 2.47
VEGFA-209ENST00000425836 RPAP2Q8IXW5 612 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-209ENST00000425836 GPR101Q96P66 508 aaPredicted RBP30.45■■■□□ 2.47
VEGFA-209ENST00000425836 LEMD3Q9Y2U8 911 aa30.45■■■□□ 2.47
VEGFA-209ENST00000425836 PPIP5K2O43314 1243 aa30.45■■■□□ 2.46
VEGFA-209ENST00000425836 CIAO1O76071 339 aa30.45■■■□□ 2.46
VEGFA-209ENST00000425836 KIAA2012Q0VF49 1180 aa30.44■■■□□ 2.46
VEGFA-209ENST00000425836 AOC3Q16853 763 aa30.44■■■□□ 2.46
VEGFA-209ENST00000425836 WASHC4Q2M389 1173 aa30.44■■■□□ 2.46
VEGFA-209ENST00000425836 SIRT2Q8IXJ6 389 aa30.44■■■□□ 2.46
VEGFA-209ENST00000425836 SPEF2Q9C093 1822 aa30.43■■■□□ 2.46
VEGFA-209ENST00000425836 LTBP1Q14766 1721 aa30.43■■■□□ 2.46
VEGFA-209ENST00000425836 SNAP23O00161 211 aa30.43■■■□□ 2.46
VEGFA-209ENST00000425836 METTL24Q5JXM2 366 aa30.43■■■□□ 2.46
VEGFA-209ENST00000425836 LARGE2Q8N3Y3 721 aa30.43■■■□□ 2.46
VEGFA-209ENST00000425836 EYA3Q99504 573 aa30.43■■■□□ 2.46
VEGFA-209ENST00000425836 ZNF804BA4D1E1 1349 aa30.42■■■□□ 2.46
VEGFA-209ENST00000425836 RIMBP2O15034 1052 aa30.41■■■□□ 2.46
VEGFA-209ENST00000425836 VGLL2Q8N8G2 317 aa30.41■■■□□ 2.46
VEGFA-209ENST00000425836 IL15P40933 162 aaPredicted RBP30.41■■■□□ 2.46
VEGFA-209ENST00000425836 ZC3H12CQ9C0D7 883 aaKnown RBP30.41■■■□□ 2.46
VEGFA-209ENST00000425836 KCNJ4P48050 445 aa30.4■■■□□ 2.46
VEGFA-209ENST00000425836 PDE8BO95263 885 aa30.39■■■□□ 2.46
VEGFA-209ENST00000425836 CENPBP07199 599 aaPredicted RBP30.38■■■□□ 2.45
VEGFA-209ENST00000425836 EXOC6Q8TAG9 804 aa30.38■■■□□ 2.45
VEGFA-209ENST00000425836 JDP2Q8WYK2 163 aa30.38■■■□□ 2.45
VEGFA-209ENST00000425836 SBF1O95248 1867 aa30.38■■■□□ 2.45
VEGFA-209ENST00000425836 SURF6O75683 361 aaKnown RBP30.37■■■□□ 2.45
VEGFA-209ENST00000425836 IRX6P78412 446 aaPredicted RBP30.37■■■□□ 2.45
VEGFA-209ENST00000425836 G3BP1Q13283 466 aaKnown RBP eCLIP30.37■■■□□ 2.45
VEGFA-209ENST00000425836 NOP58Q9Y2X3 529 aaKnown RBP30.37■■■□□ 2.45
VEGFA-209ENST00000425836 COL4A5P29400 1685 aa30.37■■■□□ 2.45
VEGFA-209ENST00000425836 KLRK1P26718 216 aa30.37■■■□□ 2.45
VEGFA-209ENST00000425836 UBE4AQ14139 1066 aa30.37■■■□□ 2.45
VEGFA-209ENST00000425836 TXNRD3Q86VQ6 643 aa30.37■■■□□ 2.45
VEGFA-209ENST00000425836 NIM1KQ8IY84 436 aa30.37■■■□□ 2.45
VEGFA-209ENST00000425836 CEP126Q9P2H0 1117 aa30.37■■■□□ 2.45
VEGFA-209ENST00000425836 PCDHB15Q9Y5E8 787 aa30.37■■■□□ 2.45
VEGFA-209ENST00000425836 HMMRO75330 724 aa30.36■■■□□ 2.45
VEGFA-209ENST00000425836 MED23Q9ULK4 1368 aa30.36■■■□□ 2.45
VEGFA-209ENST00000425836 ZC3H4Q9UPT8 1303 aaKnown RBP30.35■■■□□ 2.45
VEGFA-209ENST00000425836 IRS2Q9Y4H2 1338 aa30.35■■■□□ 2.45
VEGFA-209ENST00000425836 FZD9O00144 591 aa30.34■■■□□ 2.45
VEGFA-209ENST00000425836 DOK7Q18PE1 504 aa30.34■■■□□ 2.45
VEGFA-209ENST00000425836 C15orf52Q6ZUT6 534 aaKnown RBP30.34■■■□□ 2.45
VEGFA-209ENST00000425836 YY1P25490 414 aa30.33■■■□□ 2.45
VEGFA-209ENST00000425836 AAMPQ13685 434 aa30.33■■■□□ 2.45
VEGFA-209ENST00000425836 DBNDD1Q9H9R9 158 aa30.33■■■□□ 2.45
VEGFA-209ENST00000425836 ZNRF3Q9ULT6 936 aa30.33■■■□□ 2.45
VEGFA-209ENST00000425836 FGFR2P21802 821 aa30.32■■■□□ 2.45
VEGFA-209ENST00000425836 TFCP2Q12800 502 aa30.32■■■□□ 2.45
VEGFA-209ENST00000425836 PUM3Q15397 648 aaKnown RBP30.32■■■□□ 2.45
VEGFA-209ENST00000425836 SASH1O94885 1247 aa30.32■■■□□ 2.44
VEGFA-209ENST00000425836 CHD4Q14839 1912 aa30.32■■■□□ 2.44
VEGFA-209ENST00000425836 OS9Q13438 667 aaPredicted RBP30.31■■■□□ 2.44
VEGFA-209ENST00000425836 EXOC6BQ9Y2D4 811 aa30.31■■■□□ 2.44
VEGFA-209ENST00000425836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.31■■■□□ 2.44
VEGFA-209ENST00000425836 ECE2O60344 883 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms