RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 KRT26Q7Z3Y9 468 aa21.86■■□□□ 1.09
UPF3AP3-201ENST00000420996 ZC3H12CQ9C0D7 883 aaKnown RBP21.86■■□□□ 1.09
UPF3AP3-201ENST00000420996 PODXL2Q9NZ53 605 aa21.86■■□□□ 1.09
UPF3AP3-201ENST00000420996 CASP8AP2Q9UKL3 1982 aa21.86■■□□□ 1.09
UPF3AP3-201ENST00000420996 RTL9Q8NET4 1388 aa21.86■■□□□ 1.09
UPF3AP3-201ENST00000420996 CCDC85CA6NKD9 419 aa21.85■■□□□ 1.09
UPF3AP3-201ENST00000420996 EGFRP00533 1210 aa21.85■■□□□ 1.09
UPF3AP3-201ENST00000420996 DLK2Q6UY11 383 aa21.85■■□□□ 1.09
UPF3AP3-201ENST00000420996 DCPSQ96C86 337 aaKnown RBP21.85■■□□□ 1.09
UPF3AP3-201ENST00000420996 VIL1P09327 827 aaKnown RBP21.84■■□□□ 1.09
UPF3AP3-201ENST00000420996 RBM26Q5T8P6 1007 aaKnown RBP21.84■■□□□ 1.09
UPF3AP3-201ENST00000420996 PHAXQ9H814 394 aaKnown RBP21.84■■□□□ 1.09
UPF3AP3-201ENST00000420996 IFT57Q9NWB7 429 aa21.84■■□□□ 1.09
UPF3AP3-201ENST00000420996 SCN9AQ15858 1988 aa21.84■■□□□ 1.09
UPF3AP3-201ENST00000420996 FAM161AQ3B820 660 aa21.83■■□□□ 1.09
UPF3AP3-201ENST00000420996 C2orf69Q8N8R5 385 aa21.83■■□□□ 1.09
UPF3AP3-201ENST00000420996 CCDC191Q8NCU4 936 aa21.83■■□□□ 1.09
UPF3AP3-201ENST00000420996 GBA2Q9HCG7 927 aaPredicted RBP21.83■■□□□ 1.09
UPF3AP3-201ENST00000420996 SEC31BQ9NQW1 1179 aa21.83■■□□□ 1.09
UPF3AP3-201ENST00000420996 PCCAP05165 728 aaPredicted RBP21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 GNAI1P63096 354 aa21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 CALD1Q05682 793 aaKnown RBP21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 KIF4BQ2VIQ3 1234 aa21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 RGMBQ6NW40 437 aa21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 ZIC5Q96T25 663 aa21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 MYD88Q99836 296 aa21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 ANKIB1Q9P2G1 1089 aa21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 GGA1Q9UJY5 639 aa21.82■■□□□ 1.08
UPF3AP3-201ENST00000420996 ADM5C9JUS6 153 aa21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 G3V3G9 751 aa21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 ELL2O00472 640 aaPredicted RBP21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 UFL1O94874 794 aa21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 RGS19P49795 217 aa21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 CCDC152Q4G0S7 254 aa21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 DCAF8Q5TAQ9 597 aa21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 MCOLN1Q9GZU1 580 aa21.81■■□□□ 1.08
UPF3AP3-201ENST00000420996 FAM155AB1AL88 458 aaPredicted RBP21.8■■□□□ 1.08
UPF3AP3-201ENST00000420996 APAF1O14727 1248 aa21.8■■□□□ 1.08
UPF3AP3-201ENST00000420996 PDE8AO60658 829 aa21.8■■□□□ 1.08
UPF3AP3-201ENST00000420996 CCDC102AQ96A19 550 aa21.8■■□□□ 1.08
UPF3AP3-201ENST00000420996 PSME4Q14997 1843 aa21.79■■□□□ 1.08
UPF3AP3-201ENST00000420996 SULF1Q8IWU6 871 aa21.79■■□□□ 1.08
UPF3AP3-201ENST00000420996 CHMP4AQ9BY43 222 aa21.79■■□□□ 1.08
UPF3AP3-201ENST00000420996 PRKRIP1Q9H875 184 aaPredicted RBP21.79■■□□□ 1.08
UPF3AP3-201ENST00000420996 CWC25Q9NXE8 425 aaPredicted RBP21.79■■□□□ 1.08
UPF3AP3-201ENST00000420996 ZNF609O15014 1411 aa21.79■■□□□ 1.08
UPF3AP3-201ENST00000420996 MLLT1Q03111 559 aaPredicted RBP21.78■■□□□ 1.08
UPF3AP3-201ENST00000420996 AGBL3Q8NEM8 1001 aa21.78■■□□□ 1.08
UPF3AP3-201ENST00000420996 METTL22Q9BUU2 404 aaPredicted RBP21.78■■□□□ 1.08
UPF3AP3-201ENST00000420996 GGA3Q9NZ52 723 aa21.78■■□□□ 1.08
UPF3AP3-201ENST00000420996 DDX58O95786 925 aaKnown RBP21.77■■□□□ 1.08
UPF3AP3-201ENST00000420996 ZNF157P51786 506 aaPredicted RBP21.77■■□□□ 1.08
UPF3AP3-201ENST00000420996 ZNF280AP59817 542 aaPredicted RBP21.77■■□□□ 1.08
UPF3AP3-201ENST00000420996 DGKZQ13574 1117 aa21.77■■□□□ 1.08
UPF3AP3-201ENST00000420996 RSBN1LQ6PCB5 846 aaPredicted RBP21.77■■□□□ 1.08
UPF3AP3-201ENST00000420996 C8orf58Q8NAV2 365 aa21.77■■□□□ 1.08
UPF3AP3-201ENST00000420996 JARID2Q92833 1246 aaPredicted RBP21.77■■□□□ 1.08
UPF3AP3-201ENST00000420996 CCDC30Q5VVM6 783 aa21.76■■□□□ 1.07
UPF3AP3-201ENST00000420996 ANKRD18AQ8IVF6 992 aa21.76■■□□□ 1.07
UPF3AP3-201ENST00000420996 SAGE1Q9NXZ1 904 aa21.76■■□□□ 1.07
UPF3AP3-201ENST00000420996 ASTN2O75129 1339 aaPredicted RBP21.76■■□□□ 1.07
UPF3AP3-201ENST00000420996 XDHP47989 1333 aa21.76■■□□□ 1.07
UPF3AP3-201ENST00000420996 AKAP11Q9UKA4 1901 aa21.75■■□□□ 1.07
UPF3AP3-201ENST00000420996 KIF23Q02241 960 aaPredicted RBP21.75■■□□□ 1.07
UPF3AP3-201ENST00000420996 CCDC85AQ96PX6 553 aaPredicted RBP21.75■■□□□ 1.07
UPF3AP3-201ENST00000420996 ATP2B4P23634 1241 aa21.74■■□□□ 1.07
UPF3AP3-201ENST00000420996 SCARF1Q14162 830 aa21.74■■□□□ 1.07
UPF3AP3-201ENST00000420996 CDCA5Q96FF9 252 aa21.74■■□□□ 1.07
UPF3AP3-201ENST00000420996 GMLQ99445 158 aa21.74■■□□□ 1.07
UPF3AP3-201ENST00000420996 ANGEL2Q5VTE6 544 aaKnown RBP21.73■■□□□ 1.07
UPF3AP3-201ENST00000420996 PODNQ7Z5L7 613 aa21.73■■□□□ 1.07
UPF3AP3-201ENST00000420996 MAP3K2Q9Y2U5 619 aa21.73■■□□□ 1.07
UPF3AP3-201ENST00000420996 MYH3P11055 1940 aa21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 USP17L3A6NCW0 530 aa21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 USP17L4A6NCW7 530 aa21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 SLC10A3P09131 477 aa21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 USP17L8P0C7I0 530 aa21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 CTSWP56202 376 aa21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 USP17L1Q7RTZ2 530 aa21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 CDC5LQ99459 802 aaKnown RBP21.72■■□□□ 1.07
UPF3AP3-201ENST00000420996 KSR2Q6VAB6 950 aa21.71■■□□□ 1.07
UPF3AP3-201ENST00000420996 MYOZ2Q9NPC6 264 aa21.71■■□□□ 1.07
UPF3AP3-201ENST00000420996 RNF186Q9NXI6 227 aa21.71■■□□□ 1.07
UPF3AP3-201ENST00000420996 PITPNM2Q9BZ72 1349 aa21.71■■□□□ 1.07
UPF3AP3-201ENST00000420996 TRPA1O75762 1119 aa21.7■■□□□ 1.06
UPF3AP3-201ENST00000420996 IGKV5-2P06315 115 aa21.7■■□□□ 1.06
UPF3AP3-201ENST00000420996 FKBP1BP68106 108 aa21.7■■□□□ 1.06
UPF3AP3-201ENST00000420996 TSPYL6Q8N831 410 aa21.7■■□□□ 1.06
UPF3AP3-201ENST00000420996 TTLL11Q8NHH1 800 aa21.7■■□□□ 1.06
UPF3AP3-201ENST00000420996 CSRNP1Q96S65 589 aa21.7■■□□□ 1.06
UPF3AP3-201ENST00000420996 BSDC1Q9NW68 430 aaPredicted RBP21.7■■□□□ 1.06
UPF3AP3-201ENST00000420996 PI4KAP2A4QPH2 592 aa21.69■■□□□ 1.06
UPF3AP3-201ENST00000420996 REM2Q8IYK8 340 aaPredicted RBP21.69■■□□□ 1.06
UPF3AP3-201ENST00000420996 PI4KAP1Q8N8J0 262 aa21.69■■□□□ 1.06
UPF3AP3-201ENST00000420996 MINPP1Q9UNW1 487 aa21.69■■□□□ 1.06
UPF3AP3-201ENST00000420996 PAPPA2Q9BXP8 1791 aa21.69■■□□□ 1.06
UPF3AP3-201ENST00000420996 SPEF2Q9C093 1822 aa21.69■■□□□ 1.06
UPF3AP3-201ENST00000420996 NEXNQ0ZGT2 675 aa21.68■■□□□ 1.06
UPF3AP3-201ENST00000420996 MED23Q9ULK4 1368 aa21.68■■□□□ 1.06
UPF3AP3-201ENST00000420996 WTIPA6NIX2 430 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms