RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
SCAP-205ENST00000420588 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
SCAP-205ENST00000420588 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.34
SCAP-205ENST00000420588 ATP2B4P23634 1241 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 KCNJ4P48050 445 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 CHRNDQ07001 517 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 MTX1Q13505 466 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 C9orf131Q5VYM1 1079 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 CRBNQ96SW2 442 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 PUS3Q9BZE2 481 aaKnown RBP17.2■□□□□ 0.34
SCAP-205ENST00000420588 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 XDHP47989 1333 aa17.2■□□□□ 0.34
SCAP-205ENST00000420588 UFL1O94874 794 aa17.19■□□□□ 0.34
SCAP-205ENST00000420588 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
SCAP-205ENST00000420588 PTPN12Q05209 780 aaKnown RBP17.19■□□□□ 0.34
SCAP-205ENST00000420588 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
SCAP-205ENST00000420588 EYA3Q99504 573 aa17.19■□□□□ 0.34
SCAP-205ENST00000420588 SIL1Q9H173 461 aa17.19■□□□□ 0.34
SCAP-205ENST00000420588 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
SCAP-205ENST00000420588 COL4A1P02462 1669 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 EYA2O00167 538 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
SCAP-205ENST00000420588 LRRC24Q50LG9 513 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 METTL24Q5JXM2 366 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 CEP85Q6P2H3 762 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 RPAP2Q8IXW5 612 aaPredicted RBP17.18■□□□□ 0.34
SCAP-205ENST00000420588 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 TBC1D16Q8TBP0 767 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 RTFDC1Q9BY42 306 aaPredicted RBP17.18■□□□□ 0.34
SCAP-205ENST00000420588 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
SCAP-205ENST00000420588 MROH5Q6ZUA9 1318 aa17.18■□□□□ 0.34
SCAP-205ENST00000420588 G3V3G9 751 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 TAF5LO75529 589 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 G3BP1Q13283 466 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCAP-205ENST00000420588 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 JDP2Q8WYK2 163 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 ZC3H12CQ9C0D7 883 aaKnown RBP17.17■□□□□ 0.34
SCAP-205ENST00000420588 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 COPRSQ9NQ92 184 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 POLLQ9UGP5 575 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 LEMD3Q9Y2U8 911 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 RIPOR2Q9Y4F9 1068 aa17.17■□□□□ 0.34
SCAP-205ENST00000420588 RIMBP2O15034 1052 aa17.16■□□□□ 0.34
SCAP-205ENST00000420588 HMMRO75330 724 aa17.16■□□□□ 0.34
SCAP-205ENST00000420588 AOC3Q16853 763 aa17.16■□□□□ 0.34
SCAP-205ENST00000420588 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
SCAP-205ENST00000420588 FER1L6Q2WGJ9 1857 aa17.16■□□□□ 0.34
SCAP-205ENST00000420588 SPEF2Q9C093 1822 aa17.15■□□□□ 0.34
SCAP-205ENST00000420588 CIAO1O76071 339 aa17.15■□□□□ 0.34
SCAP-205ENST00000420588 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
SCAP-205ENST00000420588 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
SCAP-205ENST00000420588 POLA2Q14181 598 aa17.15■□□□□ 0.34
SCAP-205ENST00000420588 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
SCAP-205ENST00000420588 ZNF804BA4D1E1 1349 aa17.15■□□□□ 0.34
SCAP-205ENST00000420588 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
SCAP-205ENST00000420588 SURF6O75683 361 aaKnown RBP17.14■□□□□ 0.33
SCAP-205ENST00000420588 PRELPP51888 382 aa17.14■□□□□ 0.33
SCAP-205ENST00000420588 IRX6P78412 446 aaPredicted RBP17.14■□□□□ 0.33
SCAP-205ENST00000420588 KIAA2012Q0VF49 1180 aa17.14■□□□□ 0.33
SCAP-205ENST00000420588 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
SCAP-205ENST00000420588 GPR101Q96P66 508 aaPredicted RBP17.14■□□□□ 0.33
SCAP-205ENST00000420588 ATG9AQ7Z3C6 839 aa17.13■□□□□ 0.33
SCAP-205ENST00000420588 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
SCAP-205ENST00000420588 WTIPA6NIX2 430 aaPredicted RBP17.12■□□□□ 0.33
SCAP-205ENST00000420588 PDE8BO95263 885 aa17.12■□□□□ 0.33
SCAP-205ENST00000420588 YY1P25490 414 aa17.12■□□□□ 0.33
SCAP-205ENST00000420588 AAMPQ13685 434 aa17.12■□□□□ 0.33
SCAP-205ENST00000420588 UBE4AQ14139 1066 aa17.12■□□□□ 0.33
SCAP-205ENST00000420588 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
SCAP-205ENST00000420588 SNAP23O00161 211 aa17.11■□□□□ 0.33
SCAP-205ENST00000420588 EIF6P56537 245 aaKnown RBP17.11■□□□□ 0.33
SCAP-205ENST00000420588 DOK7Q18PE1 504 aa17.11■□□□□ 0.33
SCAP-205ENST00000420588 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
SCAP-205ENST00000420588 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
SCAP-205ENST00000420588 CHD4Q14839 1912 aa17.11■□□□□ 0.33
SCAP-205ENST00000420588 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
SCAP-205ENST00000420588 PUM3Q15397 648 aaKnown RBP17.1■□□□□ 0.33
SCAP-205ENST00000420588 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
SCAP-205ENST00000420588 SBF1O95248 1867 aa17.1■□□□□ 0.33
SCAP-205ENST00000420588 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
SCAP-205ENST00000420588 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
SCAP-205ENST00000420588 SLC5A1P13866 664 aa17.09■□□□□ 0.33
SCAP-205ENST00000420588 TFCP2Q12800 502 aa17.09■□□□□ 0.33
SCAP-205ENST00000420588 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
SCAP-205ENST00000420588 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
SCAP-205ENST00000420588 AKAP2Q9Y2D5 859 aa17.09■□□□□ 0.33
SCAP-205ENST00000420588 NOP58Q9Y2X3 529 aaKnown RBP17.09■□□□□ 0.33
SCAP-205ENST00000420588 ZC3H4Q9UPT8 1303 aaKnown RBP17.09■□□□□ 0.33
SCAP-205ENST00000420588 MED23Q9ULK4 1368 aa17.08■□□□□ 0.32
SCAP-205ENST00000420588 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
SCAP-205ENST00000420588 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.32
SCAP-205ENST00000420588 ZNF804AQ7Z570 1209 aa17.08■□□□□ 0.32
SCAP-205ENST00000420588 VPS37DQ86XT2 251 aa17.08■□□□□ 0.32
SCAP-205ENST00000420588 VGLL2Q8N8G2 317 aa17.08■□□□□ 0.32
SCAP-205ENST00000420588 LPIN2Q92539 896 aa17.08■□□□□ 0.32
SCAP-205ENST00000420588 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms