RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 GGA1Q9UJY5 639 aa27.26■■□□□ 1.95
PTPN4-202ENST00000420482 YDJCA8MPS7 323 aa27.25■■□□□ 1.95
PTPN4-202ENST00000420482 NEURL1BA8MQ27 555 aa27.25■■□□□ 1.95
PTPN4-202ENST00000420482 CCDC85AQ96PX6 553 aaPredicted RBP27.25■■□□□ 1.95
PTPN4-202ENST00000420482 ABT1Q9ULW3 272 aaKnown RBP27.25■■□□□ 1.95
PTPN4-202ENST00000420482 UFL1O94874 794 aa27.24■■□□□ 1.95
PTPN4-202ENST00000420482 CWF19L2Q2TBE0 894 aaKnown RBP27.24■■□□□ 1.95
PTPN4-202ENST00000420482 G2E3Q7L622 706 aa27.24■■□□□ 1.95
PTPN4-202ENST00000420482 ZC3H15Q8WU90 426 aaKnown RBP27.24■■□□□ 1.95
PTPN4-202ENST00000420482 DPF2Q92785 391 aa27.24■■□□□ 1.95
PTPN4-202ENST00000420482 PRDM10Q9NQV6 1147 aa27.24■■□□□ 1.95
PTPN4-202ENST00000420482 CNOT7Q9UIV1 285 aaKnown RBP27.24■■□□□ 1.95
PTPN4-202ENST00000420482 CACNA1FO60840 1977 aa27.23■■□□□ 1.95
PTPN4-202ENST00000420482 ECE2O60344 883 aa27.23■■□□□ 1.95
PTPN4-202ENST00000420482 RPS12P25398 132 aaKnown RBP27.23■■□□□ 1.95
PTPN4-202ENST00000420482 EXOSC9Q06265 439 aaKnown RBP27.23■■□□□ 1.95
PTPN4-202ENST00000420482 DEFB115Q30KQ5 88 aa27.23■■□□□ 1.95
PTPN4-202ENST00000420482 AIDAQ96BJ3 306 aa27.23■■□□□ 1.95
PTPN4-202ENST00000420482 XDHP47989 1333 aa27.22■■□□□ 1.95
PTPN4-202ENST00000420482 VAMP4O75379 141 aa27.22■■□□□ 1.95
PTPN4-202ENST00000420482 CTCFP49711 727 aaPredicted RBP27.22■■□□□ 1.95
PTPN4-202ENST00000420482 DNAAF4Q8WXU2 420 aa27.22■■□□□ 1.95
PTPN4-202ENST00000420482 WBP1LQ9NX94 342 aa27.22■■□□□ 1.95
PTPN4-202ENST00000420482 PSMD14O00487 310 aa27.21■■□□□ 1.95
PTPN4-202ENST00000420482 DOK7Q18PE1 504 aa27.21■■□□□ 1.95
PTPN4-202ENST00000420482 UBE3BQ7Z3V4 1068 aa27.21■■□□□ 1.95
PTPN4-202ENST00000420482 TTLL11Q8NHH1 800 aa27.21■■□□□ 1.95
PTPN4-202ENST00000420482 H7C1W4 665 aa27.2■■□□□ 1.94
PTPN4-202ENST00000420482 MICALL2Q8IY33 904 aa27.2■■□□□ 1.94
PTPN4-202ENST00000420482 LINS1Q8NG48 757 aa27.2■■□□□ 1.94
PTPN4-202ENST00000420482 COL4A1P02462 1669 aa27.2■■□□□ 1.94
PTPN4-202ENST00000420482 RTL9Q8NET4 1388 aa27.2■■□□□ 1.94
PTPN4-202ENST00000420482 ATP2B4P23634 1241 aa27.19■■□□□ 1.94
PTPN4-202ENST00000420482 GCKRQ14397 625 aa27.19■■□□□ 1.94
PTPN4-202ENST00000420482 PGAP2Q9UHJ9 254 aa27.19■■□□□ 1.94
PTPN4-202ENST00000420482 MYH3P11055 1940 aa27.19■■□□□ 1.94
PTPN4-202ENST00000420482 BSDC1Q9NW68 430 aaPredicted RBP27.18■■□□□ 1.94
PTPN4-202ENST00000420482 ZBTB12Q9Y330 459 aaPredicted RBP27.18■■□□□ 1.94
PTPN4-202ENST00000420482 WDR33Q9C0J8 1336 aaKnown RBP27.17■■□□□ 1.94
PTPN4-202ENST00000420482 IGHMBP2P38935 993 aaKnown RBP27.17■■□□□ 1.94
PTPN4-202ENST00000420482 CDC37L1Q7L3B6 337 aa27.17■■□□□ 1.94
PTPN4-202ENST00000420482 GREM2Q9H772 168 aa27.17■■□□□ 1.94
PTPN4-202ENST00000420482 ECE1P42892 770 aa27.16■■□□□ 1.94
PTPN4-202ENST00000420482 GPR101Q96P66 508 aaPredicted RBP27.16■■□□□ 1.94
PTPN4-202ENST00000420482 PLA2G12BQ9BX93 195 aa27.16■■□□□ 1.94
PTPN4-202ENST00000420482 FMR1Q06787 632 aaKnown RBP eCLIP27.15■■□□□ 1.94
PTPN4-202ENST00000420482 TRAF5O00463 557 aa27.14■■□□□ 1.94
PTPN4-202ENST00000420482 PAXIP1Q6ZW49 1069 aaPredicted RBP27.14■■□□□ 1.94
PTPN4-202ENST00000420482 TRPM4Q8TD43 1214 aa27.14■■□□□ 1.94
PTPN4-202ENST00000420482 VIL1P09327 827 aaKnown RBP27.13■■□□□ 1.93
PTPN4-202ENST00000420482 HIRAP54198 1017 aaPredicted RBP27.13■■□□□ 1.93
PTPN4-202ENST00000420482 MAP2K1Q02750 393 aaPredicted RBP27.13■■□□□ 1.93
PTPN4-202ENST00000420482 PODNQ7Z5L7 613 aa27.13■■□□□ 1.93
PTPN4-202ENST00000420482 MINPP1Q9UNW1 487 aa27.13■■□□□ 1.93
PTPN4-202ENST00000420482 LBX1P52954 281 aa27.12■■□□□ 1.93
PTPN4-202ENST00000420482 MPHOSPH8Q99549 860 aa27.12■■□□□ 1.93
PTPN4-202ENST00000420482 GLIS2Q9BZE0 524 aaPredicted RBP27.12■■□□□ 1.93
PTPN4-202ENST00000420482 CELF2O95319 508 aaKnown RBP27.11■■□□□ 1.93
PTPN4-202ENST00000420482 HSPA8P11142 646 aaKnown RBP27.11■■□□□ 1.93
PTPN4-202ENST00000420482 CST9Q5W186 159 aa27.11■■□□□ 1.93
PTPN4-202ENST00000420482 SAMD7Q7Z3H4 446 aa27.11■■□□□ 1.93
PTPN4-202ENST00000420482 SPINK5Q9NQ38 1064 aaPredicted RBP27.11■■□□□ 1.93
PTPN4-202ENST00000420482 KCNQ5Q9NR82 932 aa27.11■■□□□ 1.93
PTPN4-202ENST00000420482 TLL2Q9Y6L7 1015 aa27.11■■□□□ 1.93
PTPN4-202ENST00000420482 MED23Q9ULK4 1368 aa27.1■■□□□ 1.93
PTPN4-202ENST00000420482 ITGA6P23229 1130 aa27.1■■□□□ 1.93
PTPN4-202ENST00000420482 TBC1D10BQ4KMP7 808 aaPredicted RBP27.1■■□□□ 1.93
PTPN4-202ENST00000420482 AGBL3Q8NEM8 1001 aa27.1■■□□□ 1.93
PTPN4-202ENST00000420482 DCPSQ96C86 337 aaKnown RBP27.1■■□□□ 1.93
PTPN4-202ENST00000420482 CAPNS2Q96L46 248 aa27.1■■□□□ 1.93
PTPN4-202ENST00000420482 ANKRD2Q9GZV1 360 aa27.1■■□□□ 1.93
PTPN4-202ENST00000420482 SHTN1A0MZ66 631 aa27.09■■□□□ 1.93
PTPN4-202ENST00000420482 CCT4P50991 539 aaKnown RBP27.09■■□□□ 1.93
PTPN4-202ENST00000420482 LEMD3Q9Y2U8 911 aa27.09■■□□□ 1.93
PTPN4-202ENST00000420482 USP17L3A6NCW0 530 aa27.08■■□□□ 1.93
PTPN4-202ENST00000420482 USP17L4A6NCW7 530 aa27.08■■□□□ 1.93
PTPN4-202ENST00000420482 CSF1RP07333 972 aa27.08■■□□□ 1.93
PTPN4-202ENST00000420482 CASP7P55210 303 aa27.08■■□□□ 1.93
PTPN4-202ENST00000420482 KIF4BQ2VIQ3 1234 aa27.08■■□□□ 1.93
PTPN4-202ENST00000420482 RBM26Q5T8P6 1007 aaKnown RBP27.08■■□□□ 1.93
PTPN4-202ENST00000420482 RSBN1LQ6PCB5 846 aaPredicted RBP27.08■■□□□ 1.93
PTPN4-202ENST00000420482 USP17L1Q7RTZ2 530 aa27.08■■□□□ 1.93
PTPN4-202ENST00000420482 ZNF408Q9H9D4 720 aa27.08■■□□□ 1.93
PTPN4-202ENST00000420482 ZNF609O15014 1411 aa27.07■■□□□ 1.92
PTPN4-202ENST00000420482 SPEF2Q9C093 1822 aa27.07■■□□□ 1.92
PTPN4-202ENST00000420482 ANKRD18BA2A2Z9 1011 aa27.07■■□□□ 1.92
PTPN4-202ENST00000420482 FAM161AQ3B820 660 aa27.07■■□□□ 1.92
PTPN4-202ENST00000420482 BEGAINQ9BUH8 593 aa27.07■■□□□ 1.92
PTPN4-202ENST00000420482 F6X3S4 739 aa27.06■■□□□ 1.92
PTPN4-202ENST00000420482 BEND3Q5T5X7 828 aa27.06■■□□□ 1.92
PTPN4-202ENST00000420482 CYP4F22Q6NT55 531 aa27.06■■□□□ 1.92
PTPN4-202ENST00000420482 KRT26Q7Z3Y9 468 aa27.06■■□□□ 1.92
PTPN4-202ENST00000420482 HHIPL1Q96JK4 782 aa27.06■■□□□ 1.92
PTPN4-202ENST00000420482 KCNJ4P48050 445 aa27.05■■□□□ 1.92
PTPN4-202ENST00000420482 GRM1Q13255 1194 aa27.05■■□□□ 1.92
PTPN4-202ENST00000420482 SAPCD2Q86UD0 394 aa27.05■■□□□ 1.92
PTPN4-202ENST00000420482 USP48Q86UV5 1035 aa27.05■■□□□ 1.92
PTPN4-202ENST00000420482 POLR2AP24928 1970 aaKnown RBP27.05■■□□□ 1.92
PTPN4-202ENST00000420482 IFIT5Q13325 482 aaKnown RBP27.04■■□□□ 1.92
PTPN4-202ENST00000420482 COA1Q9GZY4 146 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms