RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 HTRA3P83110 453 aa19.42■□□□□ 0.7
NUP50-204ENST00000417702 DCAF8Q5TAQ9 597 aa19.42■□□□□ 0.7
NUP50-204ENST00000417702 MRPL50Q8N5N7 158 aaKnown RBP19.42■□□□□ 0.7
NUP50-204ENST00000417702 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
NUP50-204ENST00000417702 DBNDD1Q9H9R9 158 aa19.42■□□□□ 0.7
NUP50-204ENST00000417702 C9orf78Q9NZ63 289 aaPredicted RBP19.42■□□□□ 0.7
NUP50-204ENST00000417702 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
NUP50-204ENST00000417702 MYH3P11055 1940 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 YDJCA8MPS7 323 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 CSF1RP07333 972 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 ITGA6P23229 1130 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 ATP2B4P23634 1241 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 GMPSP49915 693 aaPredicted RBP19.41■□□□□ 0.7
NUP50-204ENST00000417702 FAM161AQ3B820 660 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 DNAJC5GQ8N7S2 189 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 GPR101Q96P66 508 aaPredicted RBP19.41■□□□□ 0.7
NUP50-204ENST00000417702 GPRC5DQ9NZD1 345 aa19.41■□□□□ 0.7
NUP50-204ENST00000417702 GRM8O00222 908 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 ECE2O60344 883 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 DOK7Q18PE1 504 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 USP50Q70EL3 339 aaPredicted RBP19.4■□□□□ 0.7
NUP50-204ENST00000417702 MIER1Q8N108 512 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 SSH1Q8WYL5 1049 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 MPHOSPH8Q99549 860 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 MINPP1Q9UNW1 487 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 PTPRCP08575 1304 aa19.4■□□□□ 0.7
NUP50-204ENST00000417702 ANKRD18BA2A2Z9 1011 aa19.39■□□□□ 0.69
NUP50-204ENST00000417702 ALDH1L2Q3SY69 923 aa19.39■□□□□ 0.69
NUP50-204ENST00000417702 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
NUP50-204ENST00000417702 ADARB2Q9NS39 739 aaKnown RBP19.39■□□□□ 0.69
NUP50-204ENST00000417702 CHMP3Q9Y3E7 222 aa19.39■□□□□ 0.69
NUP50-204ENST00000417702 CT47B1P0C2W7 299 aaPredicted RBP19.38■□□□□ 0.69
NUP50-204ENST00000417702 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
NUP50-204ENST00000417702 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
NUP50-204ENST00000417702 LTBP1Q14766 1721 aa19.37■□□□□ 0.69
NUP50-204ENST00000417702 PSMD14O00487 310 aa19.37■□□□□ 0.69
NUP50-204ENST00000417702 FOXO4P98177 505 aa19.37■□□□□ 0.69
NUP50-204ENST00000417702 IFIT5Q13325 482 aaKnown RBP19.37■□□□□ 0.69
NUP50-204ENST00000417702 MAP1SQ66K74 1059 aaPredicted RBP19.37■□□□□ 0.69
NUP50-204ENST00000417702 ANKRD2Q9GZV1 360 aa19.37■□□□□ 0.69
NUP50-204ENST00000417702 SMC4Q9NTJ3 1288 aa19.37■□□□□ 0.69
NUP50-204ENST00000417702 PASKQ96RG2 1323 aa19.36■□□□□ 0.69
NUP50-204ENST00000417702 H7C1D1 291 aa19.36■□□□□ 0.69
NUP50-204ENST00000417702 ITGBL1O95965 494 aaPredicted RBP19.36■□□□□ 0.69
NUP50-204ENST00000417702 LMBR1LQ6UX01 489 aa19.36■□□□□ 0.69
NUP50-204ENST00000417702 CREBZFQ9NS37 354 aa19.36■□□□□ 0.69
NUP50-204ENST00000417702 CNOT7Q9UIV1 285 aaKnown RBP19.36■□□□□ 0.69
NUP50-204ENST00000417702 CCT4P50991 539 aaKnown RBP19.35■□□□□ 0.69
NUP50-204ENST00000417702 DPF2Q92785 391 aa19.35■□□□□ 0.69
NUP50-204ENST00000417702 LEMD3Q9Y2U8 911 aa19.35■□□□□ 0.69
NUP50-204ENST00000417702 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
NUP50-204ENST00000417702 RPS12P25398 132 aaKnown RBP19.34■□□□□ 0.69
NUP50-204ENST00000417702 CCDC57Q2TAC2 916 aa19.34■□□□□ 0.69
NUP50-204ENST00000417702 TAF7LQ5H9L4 462 aa19.34■□□□□ 0.69
NUP50-204ENST00000417702 MICALL2Q8IY33 904 aa19.34■□□□□ 0.69
NUP50-204ENST00000417702 KCNQ5Q9NR82 932 aa19.34■□□□□ 0.69
NUP50-204ENST00000417702 KCNJ4P48050 445 aa19.33■□□□□ 0.68
NUP50-204ENST00000417702 EPHA10Q5JZY3 1008 aa19.33■□□□□ 0.68
NUP50-204ENST00000417702 PODNQ7Z5L7 613 aa19.33■□□□□ 0.68
NUP50-204ENST00000417702 ADAMTSL1Q8N6G6 1762 aa19.33■□□□□ 0.68
NUP50-204ENST00000417702 MED23Q9ULK4 1368 aa19.32■□□□□ 0.68
NUP50-204ENST00000417702 TMEM88BA6NKF7 163 aa19.32■□□□□ 0.68
NUP50-204ENST00000417702 VIL1P09327 827 aaKnown RBP19.32■□□□□ 0.68
NUP50-204ENST00000417702 ZNF804BA4D1E1 1349 aa19.31■□□□□ 0.68
NUP50-204ENST00000417702 UTYO14607 1347 aa19.31■□□□□ 0.68
NUP50-204ENST00000417702 NBPF7P0C2Y1 421 aaPredicted RBP19.31■□□□□ 0.68
NUP50-204ENST00000417702 CHRNDQ07001 517 aa19.31■□□□□ 0.68
NUP50-204ENST00000417702 ZC3H15Q8WU90 426 aaKnown RBP19.31■□□□□ 0.68
NUP50-204ENST00000417702 SUCLG2Q96I99 432 aa19.31■□□□□ 0.68
NUP50-204ENST00000417702 SPEF2Q9C093 1822 aa19.3■□□□□ 0.68
NUP50-204ENST00000417702 SHTN1A0MZ66 631 aa19.3■□□□□ 0.68
NUP50-204ENST00000417702 WTIPA6NIX2 430 aaPredicted RBP19.3■□□□□ 0.68
NUP50-204ENST00000417702 TRPM4Q8TD43 1214 aa19.3■□□□□ 0.68
NUP50-204ENST00000417702 COA1Q9GZY4 146 aa19.3■□□□□ 0.68
NUP50-204ENST00000417702 USP17L3A6NCW0 530 aa19.29■□□□□ 0.68
NUP50-204ENST00000417702 USP17L4A6NCW7 530 aa19.29■□□□□ 0.68
NUP50-204ENST00000417702 RSBN1LQ6PCB5 846 aaPredicted RBP19.29■□□□□ 0.68
NUP50-204ENST00000417702 LDHAL6AQ6ZMR3 332 aa19.29■□□□□ 0.68
NUP50-204ENST00000417702 USP17L1Q7RTZ2 530 aa19.29■□□□□ 0.68
NUP50-204ENST00000417702 JMYQ8N9B5 988 aa19.29■□□□□ 0.68
NUP50-204ENST00000417702 AGBL3Q8NEM8 1001 aa19.29■□□□□ 0.68
NUP50-204ENST00000417702 CNNM1Q9NRU3 951 aa19.29■□□□□ 0.68
NUP50-204ENST00000417702 NOB1Q9ULX3 412 aaKnown RBP19.29■□□□□ 0.68
NUP50-204ENST00000417702 HIRAP54198 1017 aaPredicted RBP19.28■□□□□ 0.68
NUP50-204ENST00000417702 BRPF1P55201 1214 aaPredicted RBP19.28■□□□□ 0.68
NUP50-204ENST00000417702 HNRNPUQ00839 825 aaKnown RBP eCLIP19.28■□□□□ 0.68
NUP50-204ENST00000417702 SAMD7Q7Z3H4 446 aa19.28■□□□□ 0.68
NUP50-204ENST00000417702 ZNF594Q96JF6 807 aaPredicted RBP19.28■□□□□ 0.68
NUP50-204ENST00000417702 API5Q9BZZ5 524 aaKnown RBP19.28■□□□□ 0.68
NUP50-204ENST00000417702 PGAP2Q9UHJ9 254 aa19.28■□□□□ 0.68
NUP50-204ENST00000417702 SCN9AQ15858 1988 aa19.27■□□□□ 0.68
NUP50-204ENST00000417702 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.68
NUP50-204ENST00000417702 TBC1D10BQ4KMP7 808 aaPredicted RBP19.27■□□□□ 0.68
NUP50-204ENST00000417702 RBM26Q5T8P6 1007 aaKnown RBP19.27■□□□□ 0.68
NUP50-204ENST00000417702 TXNRD3Q86VQ6 643 aa19.27■□□□□ 0.68
NUP50-204ENST00000417702 HELBQ8NG08 1087 aaPredicted RBP19.27■□□□□ 0.68
NUP50-204ENST00000417702 KAZALD1Q96I82 304 aa19.27■□□□□ 0.68
NUP50-204ENST00000417702 USP44Q9H0E7 712 aa19.27■□□□□ 0.68
NUP50-204ENST00000417702 BICC1Q9H694 974 aaKnown RBP19.27■□□□□ 0.68
NUP50-204ENST00000417702 MKRN1Q9UHC7 482 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms