RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, human

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
A1CF-208	ENST00000414883	DNAJC5G	Q8N7S2	189 aa		13.92	□□□□□ -0.18
A1CF-208	ENST00000414883	TBC1D16	Q8TBP0	767 aa		13.92	□□□□□ -0.18
A1CF-208	ENST00000414883	GPR101	Q96P66	508 aa	Predicted RBP	13.92	□□□□□ -0.18
A1CF-208	ENST00000414883	TMX4	Q9H1E5	349 aa	Predicted RBP	13.92	□□□□□ -0.18
A1CF-208	ENST00000414883	ZNRF3	Q9ULT6	936 aa		13.92	□□□□□ -0.18
A1CF-208	ENST00000414883	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.92	□□□□□ -0.18
A1CF-208	ENST00000414883	IQCA1L	A6NCM1	817 aa		13.91	□□□□□ -0.18
A1CF-208	ENST00000414883	EIF6	P56537	245 aa	Known RBP	13.91	□□□□□ -0.18
A1CF-208	ENST00000414883	FAM161A	Q3B820	660 aa		13.91	□□□□□ -0.18
A1CF-208	ENST00000414883	EPHA10	Q5JZY3	1008 aa		13.91	□□□□□ -0.18
A1CF-208	ENST00000414883	APLP1	P51693	650 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	HTRA3	P83110	453 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	ANKRD18A	Q8IVF6	992 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	KAZALD1	Q96I82	304 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	BCL2L13	Q9BXK5	485 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	BSDC1	Q9NW68	430 aa	Predicted RBP	13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	HACL1	Q9UJ83	578 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	MINPP1	Q9UNW1	487 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	GJA3	Q9Y6H8	435 aa		13.9	□□□□□ -0.18
A1CF-208	ENST00000414883	UTY	O14607	1347 aa		13.9	□□□□□ -0.19
A1CF-208	ENST00000414883	GRM8	O00222	908 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	ALDH1L1	O75891	902 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	EPHX2	P34913	555 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	EPS15	P42566	896 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	WASHC4	Q2M389	1173 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	ALDH1L2	Q3SY69	923 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	CDC5L	Q99459	802 aa	Known RBP	13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	KCNQ5	Q9NR82	932 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	PTPRC	P08575	1304 aa		13.89	□□□□□ -0.19
A1CF-208	ENST00000414883	C6orf229	H3BNL8	230 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	RAD17	O75943	681 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	ITGA6	P23229	1130 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	BRPF1	P55201	1214 aa	Predicted RBP	13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	CHADL	Q6NUI6	762 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	SLC4A10	Q6U841	1118 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	LDHD	Q86WU2	507 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	DBNDD1	Q9H9R9	158 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	GPRC5D	Q9NZD1	345 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	XDH	P47989	1333 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	PASK	Q96RG2	1323 aa		13.88	□□□□□ -0.19
A1CF-208	ENST00000414883	RIMBP2	O15034	1052 aa		13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	UFL1	O94874	794 aa		13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	ITGBL1	O95965	494 aa	Predicted RBP	13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	CT47B1	P0C2W7	299 aa	Predicted RBP	13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	GMPS	P49915	693 aa	Predicted RBP	13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	SRCIN1	Q9C0H9	1055 aa		13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	ANKIB1	Q9P2G1	1089 aa		13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	GGA1	Q9UJY5	639 aa		13.87	□□□□□ -0.19
A1CF-208	ENST00000414883	SHTN1	A0MZ66	631 aa		13.86	□□□□□ -0.19
A1CF-208	ENST00000414883	ECE2	O60344	883 aa		13.86	□□□□□ -0.19
A1CF-208	ENST00000414883	DOK7	Q18PE1	504 aa		13.86	□□□□□ -0.19
A1CF-208	ENST00000414883	CIAPIN1	Q6FI81	312 aa		13.86	□□□□□ -0.19
A1CF-208	ENST00000414883	SUCLG2	Q96I99	432 aa		13.86	□□□□□ -0.19
A1CF-208	ENST00000414883	IRS2	Q9Y4H2	1338 aa		13.86	□□□□□ -0.19
A1CF-208	ENST00000414883	PSMD14	O00487	310 aa		13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	RARS	P54136	660 aa	Known RBP	13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	EAPP	Q56P03	285 aa	Predicted RBP	13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	LMBR1L	Q6UX01	489 aa		13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	PNMA8A	Q86V59	439 aa	Predicted RBP	13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	EYA3	Q99504	573 aa		13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	SMC4	Q9NTJ3	1288 aa		13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	POLR2A	P24928	1970 aa	Known RBP	13.85	□□□□□ -0.19
A1CF-208	ENST00000414883	ZNF609	O15014	1411 aa		13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	ATP2B4	P23634	1241 aa		13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	CCT4	P50991	539 aa	Known RBP	13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	HIRA	P54198	1017 aa	Predicted RBP	13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	TNIP1	Q15025	636 aa		13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	TXNRD3	Q86VQ6	643 aa		13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	USP44	Q9H0E7	712 aa		13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.84	□□□□□ -0.19
A1CF-208	ENST00000414883	MED23	Q9ULK4	1368 aa		13.83	□□□□□ -0.19
A1CF-208	ENST00000414883	TRPM7	Q96QT4	1865 aa		13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	SNAP23	O00161	211 aa		13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	VIL1	P09327	827 aa	Known RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	KLRK1	P26718	216 aa		13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	LMOD1	P29536	600 aa	Predicted RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	IGHMBP2	P38935	993 aa	Known RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	RABL6	Q3YEC7	729 aa	Predicted RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	MAP1S	Q66K74	1059 aa	Predicted RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	USP50	Q70EL3	339 aa	Predicted RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	ANKRD44	Q8N8A2	993 aa		13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	TRPM4	Q8TD43	1214 aa		13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	DPF2	Q92785	391 aa		13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	ZNF594	Q96JF6	807 aa	Predicted RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	ADARB2	Q9NS39	739 aa	Known RBP	13.83	□□□□□ -0.2
A1CF-208	ENST00000414883	ANKRD18B	A2A2Z9	1011 aa		13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	EGFR	P00533	1210 aa		13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	CHRND	Q07001	517 aa		13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	IFIT5	Q13325	482 aa	Known RBP	13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	GML	Q99445	158 aa		13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	BICC1	Q9H694	974 aa	Known RBP	13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	PGAP2	Q9UHJ9	254 aa		13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	CNOT7	Q9UIV1	285 aa	Known RBP	13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	NOB1	Q9ULX3	412 aa	Known RBP	13.82	□□□□□ -0.2
A1CF-208	ENST00000414883	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
A1CF-208	ENST00000414883	FMR1	Q06787	632 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
A1CF-208	ENST00000414883	CNTROB	Q8N137	903 aa		13.81	□□□□□ -0.2

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