RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 PARP3Q9Y6F1 533 aa21.01■□□□□ 0.95
SHANK3-202ENST00000414786 TLDC2A0PJX2 215 aa21.01■□□□□ 0.95
SHANK3-202ENST00000414786 IFRD2Q12894 506 aaPredicted RBP21.01■□□□□ 0.95
SHANK3-202ENST00000414786 ERMNQ8TAM6 284 aa21.01■□□□□ 0.95
SHANK3-202ENST00000414786 WTAPQ15007 396 aa21.01■□□□□ 0.95
SHANK3-202ENST00000414786 PPP1R9BQ96SB3 815 aa21.01■□□□□ 0.95
SHANK3-202ENST00000414786 AGTPBP1Q9UPW5 1226 aa21.01■□□□□ 0.95
SHANK3-202ENST00000414786 CKAP4Q07065 602 aaKnown RBP21■□□□□ 0.95
SHANK3-202ENST00000414786 CGNQ9P2M7 1197 aaKnown RBP21■□□□□ 0.95
SHANK3-202ENST00000414786 RXRAP19793 462 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 FAM114A1Q8IWE2 563 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 TTC30BQ8N4P2 665 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 GNG11P61952 73 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 CCDC183Q5T5S1 534 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 RNF169Q8NCN4 708 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 KCNH5Q8NCM2 988 aa21■□□□□ 0.95
SHANK3-202ENST00000414786 NSFL1CQ9UNZ2 370 aaKnown RBP20.99■□□□□ 0.95
SHANK3-202ENST00000414786 SPDYE3A6NKU9 549 aa20.99■□□□□ 0.95
SHANK3-202ENST00000414786 PRPF31Q8WWY3 499 aaKnown RBP20.99■□□□□ 0.95
SHANK3-202ENST00000414786 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
SHANK3-202ENST00000414786 RAPGEF1Q13905 1077 aa20.99■□□□□ 0.95
SHANK3-202ENST00000414786 E7EVH7 732 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 SSFA2P28290 1259 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 RNASE9P60153 205 aaKnown RBP20.98■□□□□ 0.95
SHANK3-202ENST00000414786 ATRIPQ8WXE1 791 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 IFT81Q8WYA0 676 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 NIP7Q9Y221 180 aaKnown RBP eCLIP20.98■□□□□ 0.95
SHANK3-202ENST00000414786 RIOK3O14730 519 aaKnown RBP20.98■□□□□ 0.95
SHANK3-202ENST00000414786 MCM3P25205 808 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 SPDYE16A6NNV3 312 aaPredicted RBP20.98■□□□□ 0.95
SHANK3-202ENST00000414786 SPDYE2Q495Y8 402 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 KSR1Q8IVT5 923 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 TSTA3Q13630 321 aaPredicted RBP20.98■□□□□ 0.95
SHANK3-202ENST00000414786 NFE2L2Q16236 605 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 SMC6Q96SB8 1091 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 GMNNO75496 209 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 MCM7P33993 719 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 DNAAF4Q8WXU2 420 aa20.98■□□□□ 0.95
SHANK3-202ENST00000414786 CCDC152Q4G0S7 254 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 DHX58Q96C10 678 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 C6orf50Q9HD87 102 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 SLC39A6Q13433 755 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 FYCO1Q9BQS8 1478 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 LPXNO60711 386 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 HSPA1LP34931 641 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 BIRC3Q13489 604 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 LRRC43Q8N309 656 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 ZKSCAN3Q9BRR0 538 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 KLF18A0A0U1RQI7 1052 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 MYCLP12524 364 aaPredicted RBP20.97■□□□□ 0.95
SHANK3-202ENST00000414786 STX17P56962 302 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 CCDC24Q8N4L8 307 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 BANK1Q8NDB2 785 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 GAS8O95995 478 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 TMPOP42166 694 aaKnown RBP20.97■□□□□ 0.95
SHANK3-202ENST00000414786 GSTO1P78417 241 aa20.97■□□□□ 0.95
SHANK3-202ENST00000414786 PPP1R7Q15435 360 aa20.96■□□□□ 0.95
SHANK3-202ENST00000414786 CCDC169A6NNP5 214 aa20.96■□□□□ 0.95
SHANK3-202ENST00000414786 SNW1Q13573 536 aaKnown RBP20.96■□□□□ 0.95
SHANK3-202ENST00000414786 SCAPERQ9BY12 1400 aa20.96■□□□□ 0.95
SHANK3-202ENST00000414786 FBLN1P23142 703 aa20.96■□□□□ 0.95
SHANK3-202ENST00000414786 CNGA1P29973 690 aa20.96■□□□□ 0.95
SHANK3-202ENST00000414786 SPATA17Q96L03 361 aa20.95■□□□□ 0.95
SHANK3-202ENST00000414786 SEC62Q99442 399 aaKnown RBP20.95■□□□□ 0.95
SHANK3-202ENST00000414786 FAM47CQ5HY64 1035 aa20.95■□□□□ 0.94
SHANK3-202ENST00000414786 FCHSD1Q86WN1 690 aa20.95■□□□□ 0.94
SHANK3-202ENST00000414786 GPCPD1Q9NPB8 672 aa20.95■□□□□ 0.94
SHANK3-202ENST00000414786 FCHSD2O94868 740 aa20.95■□□□□ 0.94
SHANK3-202ENST00000414786 ZNF710Q8N1W2 664 aa20.95■□□□□ 0.94
SHANK3-202ENST00000414786 ANKRD30BQ9BXX2 1392 aa20.95■□□□□ 0.94
SHANK3-202ENST00000414786 NOL3O60936 208 aaKnown RBP20.95■□□□□ 0.94
SHANK3-202ENST00000414786 NAA16Q6N069 864 aaPredicted RBP20.94■□□□□ 0.94
SHANK3-202ENST00000414786 RSPH3Q86UC2 560 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 NCOA7Q8NI08 942 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 EMILIN1Q9Y6C2 1016 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 MCM6Q14566 821 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 CCDC89Q8N998 374 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 ATP6V0A2Q9Y487 856 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 CABLES1Q8TDN4 633 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 DYNC1I1O14576 645 aa20.94■□□□□ 0.94
SHANK3-202ENST00000414786 FOXD4Q12950 439 aaPredicted RBP20.94■□□□□ 0.94
SHANK3-202ENST00000414786 ZHX1Q9UKY1 873 aaPredicted RBP20.94■□□□□ 0.94
SHANK3-202ENST00000414786 GIMAP6Q6P9H5 292 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 FAM200AQ8TCP9 573 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 ZC3H12CQ9C0D7 883 aaKnown RBP20.93■□□□□ 0.94
SHANK3-202ENST00000414786 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.93■□□□□ 0.942e-6■■■□□ 15.7
SHANK3-202ENST00000414786 V9GYY5 206 aaPredicted RBP20.93■□□□□ 0.94
SHANK3-202ENST00000414786 DACT3Q96B18 629 aaPredicted RBP20.93■□□□□ 0.94
SHANK3-202ENST00000414786 SELENOOQ9BVL4 669 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 RASAL2Q9UJF2 1139 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 ZBTB24O43167 697 aaPredicted RBP20.93■□□□□ 0.94
SHANK3-202ENST00000414786 MNAT1P51948 309 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 ALG1Q9BT22 464 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 ANKFY1Q9P2R3 1169 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 ERBINQ96RT1 1412 aa20.93■□□□□ 0.94
SHANK3-202ENST00000414786 FAM83GA6ND36 823 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 UBASH3AP57075 661 aa20.92■□□□□ 0.94
SHANK3-202ENST00000414786 IFI16Q16666 785 aaKnown RBP20.92■□□□□ 0.94
SHANK3-202ENST00000414786 TTC12Q9H892 705 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms