RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 COL4A1P02462 1669 aa12.28□□□□□ -0.44
DDB1-202ENST00000414411 H0YIN7 160 aa12.27□□□□□ -0.44
DDB1-202ENST00000414411 COL11A2P13942 1736 aaPredicted RBP12.27□□□□□ -0.44
DDB1-202ENST00000414411 NPR1P16066 1061 aa12.27□□□□□ -0.44
DDB1-202ENST00000414411 KCNA3P22001 575 aa12.27□□□□□ -0.44
DDB1-202ENST00000414411 TGFB2P61812 414 aa12.27□□□□□ -0.44
DDB1-202ENST00000414411 DDX46Q7L014 1031 aaKnown RBP12.27□□□□□ -0.44
DDB1-202ENST00000414411 SMC5Q8IY18 1101 aa12.27□□□□□ -0.44
DDB1-202ENST00000414411 CELF1Q92879 486 aaKnown RBP12.27□□□□□ -0.44
DDB1-202ENST00000414411 ZNF594Q96JF6 807 aaPredicted RBP12.27□□□□□ -0.44
DDB1-202ENST00000414411 PA2G4Q9UQ80 394 aaKnown RBP12.27□□□□□ -0.44
DDB1-202ENST00000414411 SEC24BO95487 1268 aa12.27□□□□□ -0.45
DDB1-202ENST00000414411 CHRNA5P30532 468 aa12.27□□□□□ -0.45
DDB1-202ENST00000414411 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
DDB1-202ENST00000414411 C2CD5Q86YS7 1000 aa12.27□□□□□ -0.45
DDB1-202ENST00000414411 RPGRQ92834 1020 aaKnown RBP12.27□□□□□ -0.45
DDB1-202ENST00000414411 MASTLQ96GX5 879 aa12.27□□□□□ -0.45
DDB1-202ENST00000414411 KIAA1551Q9HCM1 1747 aa12.26□□□□□ -0.45
DDB1-202ENST00000414411 STYK1Q6J9G0 422 aa12.26□□□□□ -0.45
DDB1-202ENST00000414411 RBM17Q96I25 401 aaKnown RBP12.26□□□□□ -0.45
DDB1-202ENST00000414411 CDC5LQ99459 802 aaKnown RBP12.26□□□□□ -0.45
DDB1-202ENST00000414411 A0A0G2JLW4 131 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 SURF6O75683 361 aaKnown RBP12.25□□□□□ -0.45
DDB1-202ENST00000414411 DPEP1P16444 411 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 GRAPQ13588 217 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 GRAPLQ8TC17 118 aaPredicted RBP12.25□□□□□ -0.45
DDB1-202ENST00000414411 PUS3Q9BZE2 481 aaKnown RBP12.25□□□□□ -0.45
DDB1-202ENST00000414411 RIPOR2Q9Y4F9 1068 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 EYA2O00167 538 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 BBOX1O75936 387 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 CIAO1O76071 339 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 ALDH1B1P30837 517 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 ANKRD18AQ8IVF6 992 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
DDB1-202ENST00000414411 EXOC6BQ9Y2D4 811 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 DLEC1Q9Y238 1755 aa12.25□□□□□ -0.45
DDB1-202ENST00000414411 LRRC24Q50LG9 513 aa12.24□□□□□ -0.45
DDB1-202ENST00000414411 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
DDB1-202ENST00000414411 SASH1O94885 1247 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 IGHMBP2P38935 993 aaKnown RBP12.23□□□□□ -0.45
DDB1-202ENST00000414411 TAF7LQ5H9L4 462 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 CNKSR1Q969H4 720 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 ZNF622Q969S3 477 aaKnown RBP eCLIP12.23□□□□□ -0.45
DDB1-202ENST00000414411 SIL1Q9H173 461 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 PPP1R1BQ9UD71 204 aaPredicted RBP12.23□□□□□ -0.45
DDB1-202ENST00000414411 LRP5O75197 1615 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 SLX4Q8IY92 1834 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 DEKP35659 375 aaKnown RBP12.23□□□□□ -0.45
DDB1-202ENST00000414411 G3BP1Q13283 466 aaKnown RBP eCLIP12.23□□□□□ -0.453e-9■□□□□ 10.7
DDB1-202ENST00000414411 HSP90AB4PQ58FF6 505 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 MPHOSPH8Q99549 860 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
DDB1-202ENST00000414411 MINPP1Q9UNW1 487 aa12.23□□□□□ -0.45
DDB1-202ENST00000414411 BRCA1P38398 1863 aaKnown RBP12.22□□□□□ -0.45
DDB1-202ENST00000414411 RAB11FIP3O75154 756 aa12.22□□□□□ -0.45
DDB1-202ENST00000414411 IL15P40933 162 aaPredicted RBP12.22□□□□□ -0.45
DDB1-202ENST00000414411 NUCB1Q02818 461 aa12.22□□□□□ -0.45
DDB1-202ENST00000414411 C7orf43Q8WVR3 580 aa12.22□□□□□ -0.45
DDB1-202ENST00000414411 UPF2Q9HAU5 1272 aaKnown RBP12.22□□□□□ -0.45
DDB1-202ENST00000414411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.22□□□□□ -0.45
DDB1-202ENST00000414411 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
DDB1-202ENST00000414411 TMC4Q7Z404 712 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 SP8Q8IXZ3 490 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 TTLL6Q8N841 843 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 TBC1D32Q96NH3 1257 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 SYT17Q9BSW7 474 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 CNNM1Q9NRU3 951 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 PIM2Q9P1W9 311 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
DDB1-202ENST00000414411 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.46
DDB1-202ENST00000414411 SLC51AQ86UW1 340 aa12.21□□□□□ -0.46
DDB1-202ENST00000414411 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.46
DDB1-202ENST00000414411 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.46
DDB1-202ENST00000414411 MROH5Q6ZUA9 1318 aa12.21□□□□□ -0.46
DDB1-202ENST00000414411 CHRNDQ07001 517 aa12.2□□□□□ -0.46
DDB1-202ENST00000414411 ERC1Q8IUD2 1116 aa12.2□□□□□ -0.46
DDB1-202ENST00000414411 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
DDB1-202ENST00000414411 CACNA1SQ13698 1873 aa12.2□□□□□ -0.46
DDB1-202ENST00000414411 PPEF1O14829 653 aaPredicted RBP12.19□□□□□ -0.46
DDB1-202ENST00000414411 PDE8BO95263 885 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 TFCP2Q12800 502 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 OS9Q13438 667 aaPredicted RBP12.19□□□□□ -0.46
DDB1-202ENST00000414411 CEP126Q9P2H0 1117 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 UTRNP46939 3433 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 LRRC37AA6NMS7 1700 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 APBB1O00213 710 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 ANKRD45Q5TZF3 282 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 CHD1LQ86WJ1 897 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 HELBQ8NG08 1087 aaPredicted RBP12.19□□□□□ -0.46
DDB1-202ENST00000414411 LRRCC1Q9C099 1032 aa12.19□□□□□ -0.46
DDB1-202ENST00000414411 TAF5LO75529 589 aa12.18□□□□□ -0.46
DDB1-202ENST00000414411 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
DDB1-202ENST00000414411 METTL24Q5JXM2 366 aa12.18□□□□□ -0.46
DDB1-202ENST00000414411 OLFM4Q6UX06 510 aa12.18□□□□□ -0.46
DDB1-202ENST00000414411 ANKRD2Q9GZV1 360 aa12.18□□□□□ -0.46
DDB1-202ENST00000414411 GPR108Q9NPR9 543 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms