RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 TNNT1P13805 278 aa16.31■□□□□ 0.2
COPS7B-210ENST00000413197 LEO1Q8WVC0 666 aaPredicted RBP16.31■□□□□ 0.2
COPS7B-210ENST00000413197 NGLY1Q96IV0 654 aa16.31■□□□□ 0.2
COPS7B-210ENST00000413197 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
COPS7B-210ENST00000413197 CHMP3Q9Y3E7 222 aa16.31■□□□□ 0.2
COPS7B-210ENST00000413197 CEMIPQ8WUJ3 1361 aa16.31■□□□□ 0.2
COPS7B-210ENST00000413197 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 RAD21O60216 631 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 CDC25BP30305 580 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 GPATCH3Q96I76 525 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 TRIM5Q9C035 493 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 SLIT2O94813 1529 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 SLC27A2O14975 620 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 COL9A3Q14050 684 aaPredicted RBP16.3■□□□□ 0.2
COPS7B-210ENST00000413197 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
COPS7B-210ENST00000413197 DDX54Q8TDD1 881 aaKnown RBP16.3■□□□□ 0.2
COPS7B-210ENST00000413197 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 SPATA32Q96LK8 384 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
COPS7B-210ENST00000413197 CLGNO14967 610 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 EIF4A1P60842 406 aaKnown RBP16.29■□□□□ 0.2
COPS7B-210ENST00000413197 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 ADCY9O60503 1353 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 HIP1O00291 1037 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 CYP27B1O15528 508 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 CAVIN2O95810 425 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 DRC7Q8IY82 874 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 CACTINQ8WUQ7 758 aaKnown RBP16.29■□□□□ 0.2
COPS7B-210ENST00000413197 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
COPS7B-210ENST00000413197 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
COPS7B-210ENST00000413197 GOLGA6L4A6NEF3 574 aa16.28■□□□□ 0.2
COPS7B-210ENST00000413197 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
COPS7B-210ENST00000413197 ZNF165P49910 485 aa16.28■□□□□ 0.2
COPS7B-210ENST00000413197 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
COPS7B-210ENST00000413197 EIF2S2P20042 333 aaKnown RBP16.28■□□□□ 0.2
COPS7B-210ENST00000413197 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
COPS7B-210ENST00000413197 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
COPS7B-210ENST00000413197 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
COPS7B-210ENST00000413197 NR1I2O75469 434 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 RPS6KB1P23443 525 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 NMIQ13287 307 aaPredicted RBP16.27■□□□□ 0.2
COPS7B-210ENST00000413197 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
COPS7B-210ENST00000413197 CCDC144BQ3MJ40 725 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 SARM1Q6SZW1 724 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 CCDC112Q8NEF3 446 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 CLIP2Q9UDT6 1046 aa16.27■□□□□ 0.2
COPS7B-210ENST00000413197 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.19
COPS7B-210ENST00000413197 TFIP11Q9UBB9 837 aaKnown RBP16.27■□□□□ 0.19
COPS7B-210ENST00000413197 SPATA31A6Q5VVP1 1343 aa16.27■□□□□ 0.19
COPS7B-210ENST00000413197 KDM3BQ7LBC6 1761 aa16.26■□□□□ 0.19
COPS7B-210ENST00000413197 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
COPS7B-210ENST00000413197 KCNJ4P48050 445 aa16.26■□□□□ 0.19
COPS7B-210ENST00000413197 GABPB1Q06547 395 aaPredicted RBP16.26■□□□□ 0.19
COPS7B-210ENST00000413197 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
COPS7B-210ENST00000413197 KCTD17Q8N5Z5 321 aa16.26■□□□□ 0.19
COPS7B-210ENST00000413197 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
COPS7B-210ENST00000413197 OVOS2A0A0G2JMS6 1433 aa16.26■□□□□ 0.19
COPS7B-210ENST00000413197 RBM6P78332 1123 aaKnown RBP16.26■□□□□ 0.19
COPS7B-210ENST00000413197 RNF20Q5VTR2 975 aa16.26■□□□□ 0.19
COPS7B-210ENST00000413197 MORC2Q9Y6X9 1032 aaPredicted RBP16.26■□□□□ 0.19
COPS7B-210ENST00000413197 IQCB1Q15051 598 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 TPD52L1Q16890 204 aaPredicted RBP16.25■□□□□ 0.19
COPS7B-210ENST00000413197 PLEKHO1Q53GL0 409 aaPredicted RBP16.25■□□□□ 0.19
COPS7B-210ENST00000413197 AACSQ86V21 672 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 ALDH1L1O75891 902 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 IL2RBP14784 551 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 LRRC8AQ8IWT6 810 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 MRFAP1L1Q96HT8 127 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 PA2G4Q9UQ80 394 aaKnown RBP16.25■□□□□ 0.19
COPS7B-210ENST00000413197 SPATA31A1Q5TZJ5 1347 aa16.25■□□□□ 0.19
COPS7B-210ENST00000413197 A0A0D9SFI3 127 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 NEMFO60524 1076 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 RESTQ13127 1097 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 NAA30Q147X3 362 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-210ENST00000413197 HMG20BQ9P0W2 317 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 TAF6LQ9Y6J9 622 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 MEX3CQ5U5Q3 659 aaKnown RBP16.24■□□□□ 0.19
COPS7B-210ENST00000413197 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 FNBP4Q8N3X1 1017 aaPredicted RBP16.24■□□□□ 0.19
COPS7B-210ENST00000413197 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 TCEANC2Q96MN5 208 aa16.24■□□□□ 0.19
COPS7B-210ENST00000413197 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
COPS7B-210ENST00000413197 PHKG2P15735 406 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 NYAP1Q6ZVC0 841 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 KIF18AQ8NI77 898 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 USP21Q9UK80 565 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 SHANK3Q9BYB0 1731 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 SASH1O94885 1247 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 AKAP4Q5JQC9 854 aa16.23■□□□□ 0.19
COPS7B-210ENST00000413197 ZNF622Q969S3 477 aaKnown RBP eCLIP16.23■□□□□ 0.19
COPS7B-210ENST00000413197 EAF2Q96CJ1 260 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms