RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 AK5Q9Y6K8 562 aa6.81□□□□□ -1.32
BRCA1-204ENST00000412061 MAP3K6O95382 1288 aa6.8□□□□□ -1.32
BRCA1-204ENST00000412061 POLR3DP05423 398 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-204ENST00000412061 PSAPP07602 524 aa6.8□□□□□ -1.32
BRCA1-204ENST00000412061 EIF4BP23588 611 aaKnown RBP6.8□□□□□ -1.32
BRCA1-204ENST00000412061 GRIN2CQ14957 1233 aa6.8□□□□□ -1.32
BRCA1-204ENST00000412061 SV2AQ7L0J3 742 aa6.8□□□□□ -1.32
BRCA1-204ENST00000412061 EPS8L3Q8TE67 593 aaKnown RBP6.8□□□□□ -1.32
BRCA1-204ENST00000412061 BHMTQ93088 406 aa6.8□□□□□ -1.32
BRCA1-204ENST00000412061 ZFATQ9P243 1243 aa6.8□□□□□ -1.32
BRCA1-204ENST00000412061 HCN2Q9UL51 889 aa6.8□□□□□ -1.32
BRCA1-204ENST00000412061 GADD45BO75293 160 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-204ENST00000412061 CYP2E1P05181 493 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-204ENST00000412061 EDN3P14138 238 aa6.79□□□□□ -1.32
BRCA1-204ENST00000412061 IRS1P35568 1242 aa6.79□□□□□ -1.32
BRCA1-204ENST00000412061 SOX18P35713 384 aa6.79□□□□□ -1.32
BRCA1-204ENST00000412061 PI16Q6UXB8 463 aa6.79□□□□□ -1.32
BRCA1-204ENST00000412061 VWA5B2Q8N398 1253 aa6.79□□□□□ -1.32
BRCA1-204ENST00000412061 NANOS1Q8WY41 292 aaKnown RBP6.79□□□□□ -1.32
BRCA1-204ENST00000412061 TLR7Q9NYK1 1049 aaKnown RBP6.79□□□□□ -1.32
BRCA1-204ENST00000412061 KANSL3Q9P2N6 904 aa6.79□□□□□ -1.32
BRCA1-204ENST00000412061 GPR25O00155 361 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 SCAMP3O14828 347 aaKnown RBP6.78□□□□□ -1.32
BRCA1-204ENST00000412061 KRT76Q01546 638 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 PLAURQ03405 335 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 RAB44Q7Z6P3 723 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-204ENST00000412061 TMEM87AQ8NBN3 555 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 SRCIN1Q9C0H9 1055 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 C12orf49Q9H741 205 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 PRR12Q9ULL5 1215 aa6.78□□□□□ -1.32
BRCA1-204ENST00000412061 HOXD8P13378 290 aaPredicted RBP6.77□□□□□ -1.32
BRCA1-204ENST00000412061 CTBSQ01459 385 aa6.77□□□□□ -1.32
BRCA1-204ENST00000412061 HYAL2Q12891 473 aa6.77□□□□□ -1.32
BRCA1-204ENST00000412061 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.32
BRCA1-204ENST00000412061 CRELD1Q96HD1 420 aa6.77□□□□□ -1.32
BRCA1-204ENST00000412061 DRC1Q96MC2 740 aa6.77□□□□□ -1.32
BRCA1-204ENST00000412061 OSBPL7Q9BZF2 842 aa6.77□□□□□ -1.32
BRCA1-204ENST00000412061 SUV39H2Q9H5I1 410 aa6.77□□□□□ -1.32
BRCA1-204ENST00000412061 SALL4Q9UJQ4 1053 aa6.77□□□□□ -1.32
BRCA1-204ENST00000412061 EIF5BO60841 1220 aaKnown RBP6.76□□□□□ -1.33
BRCA1-204ENST00000412061 LDLRAD1Q5T700 205 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 KIAA0319Q5VV43 1072 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 NCAPG2Q86XI2 1143 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 GPR161Q8N6U8 529 aaKnown RBP6.76□□□□□ -1.33
BRCA1-204ENST00000412061 BCO2Q9BYV7 579 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 PPP4R2Q9NY27 417 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 A0A1W2PP55 124 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 KIF4AO95239 1232 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 BMP4P12644 408 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 NRLP54845 237 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 NXPE4Q6UWF7 544 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 EHD4Q9H223 541 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 METTL5Q9NRN9 209 aaKnown RBP6.76□□□□□ -1.33
BRCA1-204ENST00000412061 TRAK1Q9UPV9 953 aa6.76□□□□□ -1.33
BRCA1-204ENST00000412061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-204ENST00000412061 PPM1GO15355 546 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-204ENST00000412061 CTSHP09668 335 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 USP17L7P0C7H9 530 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 GPLD1P80108 840 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 GRM2Q14416 872 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 PCSK7Q16549 785 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 ZNF468Q5VIY5 522 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-204ENST00000412061 PEAR1Q5VY43 1037 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-204ENST00000412061 SYT9Q86SS6 491 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 SREK1Q8WXA9 508 aaKnown RBP6.75□□□□□ -1.33
BRCA1-204ENST00000412061 SPACA7Q96KW9 195 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 CHMP4AQ9BY43 222 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 LATS2Q9NRM7 1088 aa6.75□□□□□ -1.33
BRCA1-204ENST00000412061 MX2P20592 715 aa6.74□□□□□ -1.33
BRCA1-204ENST00000412061 ZNF76P36508 570 aa6.74□□□□□ -1.33
BRCA1-204ENST00000412061 HDLBPQ00341 1268 aaKnown RBP6.74□□□□□ -1.33
BRCA1-204ENST00000412061 COL13A1Q5TAT6 717 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-204ENST00000412061 TRPM4Q8TD43 1214 aa6.74□□□□□ -1.33
BRCA1-204ENST00000412061 RNF34Q969K3 372 aa6.74□□□□□ -1.33
BRCA1-204ENST00000412061 NSUN5Q96P11 429 aaKnown RBP6.74□□□□□ -1.33
BRCA1-204ENST00000412061 UBE2OQ9C0C9 1292 aaKnown RBP6.74□□□□□ -1.33
BRCA1-204ENST00000412061 AVENQ9NQS1 362 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-204ENST00000412061 NSFL1CQ9UNZ2 370 aaKnown RBP6.74□□□□□ -1.33
BRCA1-204ENST00000412061 LOC102724428A0A0B4J2F2 783 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 C2CD2LO14523 706 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 SIN3BO75182 1162 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 GSTT1P30711 240 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 SIK1P57059 783 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 FANCCQ00597 558 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 TBC1D8BQ0IIM8 1120 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 PRPF40BQ6NWY9 871 aaKnown RBP6.73□□□□□ -1.33
BRCA1-204ENST00000412061 CEP120Q8N960 986 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 GLIS3Q8NEA6 775 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 C8orf37Q96NL8 207 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 CNTNAP3BQ96NU0 1288 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 OSMRQ99650 979 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 ZKSCAN3Q9BRR0 538 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 CNTNAP3Q9BZ76 1288 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 IGFLR1Q9H665 355 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
BRCA1-204ENST00000412061 DNAJB12Q9NXW2 375 aaKnown RBP6.73□□□□□ -1.33
BRCA1-204ENST00000412061 SMARCA5O60264 1052 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-204ENST00000412061 GHRHP01286 108 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms