RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 ITPRIPQ8IWB1 547 aa29.91■■■□□ 2.38
UBE2E3-202ENST00000410062 POLLQ9UGP5 575 aa29.91■■■□□ 2.38
UBE2E3-202ENST00000410062 COL4A5P29400 1685 aa29.9■■■□□ 2.38
UBE2E3-202ENST00000410062 PPIP5K2O43314 1243 aa29.9■■■□□ 2.38
UBE2E3-202ENST00000410062 GNAI3P08754 354 aa29.9■■■□□ 2.38
UBE2E3-202ENST00000410062 LARGE2Q8N3Y3 721 aa29.9■■■□□ 2.38
UBE2E3-202ENST00000410062 ZC3H4Q9UPT8 1303 aaKnown RBP29.9■■■□□ 2.38
UBE2E3-202ENST00000410062 C6orf229H3BNL8 230 aa29.9■■■□□ 2.38
UBE2E3-202ENST00000410062 PODXL2Q9NZ53 605 aa29.9■■■□□ 2.38
UBE2E3-202ENST00000410062 TBC1D16Q8TBP0 767 aa29.89■■■□□ 2.38
UBE2E3-202ENST00000410062 GPR101Q96P66 508 aaPredicted RBP29.89■■■□□ 2.38
UBE2E3-202ENST00000410062 XDHP47989 1333 aa29.88■■■□□ 2.37
UBE2E3-202ENST00000410062 HDAC5Q9UQL6 1122 aa29.88■■■□□ 2.37
UBE2E3-202ENST00000410062 UFL1O94874 794 aa29.87■■■□□ 2.37
UBE2E3-202ENST00000410062 GGA1Q9UJY5 639 aa29.87■■■□□ 2.37
UBE2E3-202ENST00000410062 LDHAL6AQ6ZMR3 332 aa29.86■■■□□ 2.37
UBE2E3-202ENST00000410062 JDP2Q8WYK2 163 aa29.86■■■□□ 2.37
UBE2E3-202ENST00000410062 VPS33BQ9H267 617 aa29.86■■■□□ 2.37
UBE2E3-202ENST00000410062 WTIPA6NIX2 430 aaPredicted RBP29.86■■■□□ 2.37
UBE2E3-202ENST00000410062 MS4A1P11836 297 aa29.86■■■□□ 2.37
UBE2E3-202ENST00000410062 KIAA2012Q0VF49 1180 aa29.86■■■□□ 2.37
UBE2E3-202ENST00000410062 WASHC4Q2M389 1173 aa29.86■■■□□ 2.37
UBE2E3-202ENST00000410062 RIMBP2O15034 1052 aa29.85■■■□□ 2.37
UBE2E3-202ENST00000410062 CHRNDQ07001 517 aa29.85■■■□□ 2.37
UBE2E3-202ENST00000410062 KLHDC4Q8TBB5 520 aa29.85■■■□□ 2.37
UBE2E3-202ENST00000410062 CNNM1Q9NRU3 951 aa29.85■■■□□ 2.37
UBE2E3-202ENST00000410062 PUS3Q9BZE2 481 aaKnown RBP29.84■■■□□ 2.37
UBE2E3-202ENST00000410062 GNAI2P04899 355 aa29.83■■■□□ 2.37
UBE2E3-202ENST00000410062 NIM1KQ8IY84 436 aa29.83■■■□□ 2.37
UBE2E3-202ENST00000410062 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.83■■■□□ 2.37
UBE2E3-202ENST00000410062 GPBP1L1Q9HC44 474 aaPredicted RBP29.83■■■□□ 2.37
UBE2E3-202ENST00000410062 FZD9O00144 591 aa29.82■■■□□ 2.36
UBE2E3-202ENST00000410062 ZBTB7BO15156 539 aaPredicted RBP29.82■■■□□ 2.36
UBE2E3-202ENST00000410062 ATP2B4P23634 1241 aa29.82■■■□□ 2.36
UBE2E3-202ENST00000410062 HELBQ8NG08 1087 aaPredicted RBP29.82■■■□□ 2.36
UBE2E3-202ENST00000410062 EYA3Q99504 573 aa29.82■■■□□ 2.36
UBE2E3-202ENST00000410062 ANKRD2Q9GZV1 360 aa29.82■■■□□ 2.36
UBE2E3-202ENST00000410062 GLTPD2A6NH11 291 aa29.81■■■□□ 2.36
UBE2E3-202ENST00000410062 RFX5P48382 616 aaPredicted RBP29.81■■■□□ 2.36
UBE2E3-202ENST00000410062 ZNF541Q9H0D2 1346 aa29.81■■■□□ 2.36
UBE2E3-202ENST00000410062 C20orf194Q5TEA3 1177 aa29.81■■■□□ 2.36
UBE2E3-202ENST00000410062 COG6Q9Y2V7 657 aa29.81■■■□□ 2.36
UBE2E3-202ENST00000410062 TAF5LO75529 589 aa29.8■■■□□ 2.36
UBE2E3-202ENST00000410062 DPY19L2Q6NUT2 758 aa29.8■■■□□ 2.36
UBE2E3-202ENST00000410062 ZC3H12CQ9C0D7 883 aaKnown RBP29.8■■■□□ 2.36
UBE2E3-202ENST00000410062 KDM2BQ8NHM5 1336 aa29.8■■■□□ 2.36
UBE2E3-202ENST00000410062 A0A1B0GUL6 1792 aa29.8■■■□□ 2.36
UBE2E3-202ENST00000410062 LRRC24Q50LG9 513 aa29.79■■■□□ 2.36
UBE2E3-202ENST00000410062 C1orf115Q9H7X2 142 aa29.79■■■□□ 2.36
UBE2E3-202ENST00000410062 DDNO94850 711 aaPredicted RBP29.78■■■□□ 2.36
UBE2E3-202ENST00000410062 PTPN12Q05209 780 aaKnown RBP29.78■■■□□ 2.36
UBE2E3-202ENST00000410062 MVPQ14764 893 aaKnown RBP29.78■■■□□ 2.36
UBE2E3-202ENST00000410062 LEMD3Q9Y2U8 911 aa29.78■■■□□ 2.36
UBE2E3-202ENST00000410062 RIPOR2Q9Y4F9 1068 aa29.78■■■□□ 2.36
UBE2E3-202ENST00000410062 SNAP23O00161 211 aa29.77■■■□□ 2.36
UBE2E3-202ENST00000410062 DOK7Q18PE1 504 aa29.77■■■□□ 2.36
UBE2E3-202ENST00000410062 DBNDD1Q9H9R9 158 aa29.77■■■□□ 2.36
UBE2E3-202ENST00000410062 NMRK2Q9NPI5 230 aa29.77■■■□□ 2.36
UBE2E3-202ENST00000410062 ZNRF3Q9ULT6 936 aa29.77■■■□□ 2.36
UBE2E3-202ENST00000410062 ZNF804BA4D1E1 1349 aa29.77■■■□□ 2.36
UBE2E3-202ENST00000410062 EIF6P56537 245 aaKnown RBP29.77■■■□□ 2.36
UBE2E3-202ENST00000410062 SRGAP3O43295 1099 aa29.76■■■□□ 2.35
UBE2E3-202ENST00000410062 KCNJ4P48050 445 aa29.76■■■□□ 2.35
UBE2E3-202ENST00000410062 PDE3AQ14432 1141 aa29.76■■■□□ 2.35
UBE2E3-202ENST00000410062 MTX1Q13505 466 aa29.75■■■□□ 2.35
UBE2E3-202ENST00000410062 YDJCA8MPS7 323 aa29.74■■■□□ 2.35
UBE2E3-202ENST00000410062 SIL1Q9H173 461 aa29.74■■■□□ 2.35
UBE2E3-202ENST00000410062 PA2G4Q9UQ80 394 aaKnown RBP29.74■■■□□ 2.35
UBE2E3-202ENST00000410062 KLRK1P26718 216 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 RRAGCQ9HB90 399 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 DDX19BQ9UMR2 479 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 MROH5Q6ZUA9 1318 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 MED23Q9ULK4 1368 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 EYA2O00167 538 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 ECE2O60344 883 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 RRP1P56182 461 aaKnown RBP29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 TXNRD3Q86VQ6 643 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 GJA3Q9Y6H8 435 aa29.73■■■□□ 2.35
UBE2E3-202ENST00000410062 PNMA6EA0A0J9YXQ4 647 aa29.72■■■□□ 2.35
UBE2E3-202ENST00000410062 G3V3G9 751 aa29.72■■■□□ 2.35
UBE2E3-202ENST00000410062 CXCL9Q07325 125 aa29.72■■■□□ 2.35
UBE2E3-202ENST00000410062 METTL24Q5JXM2 366 aa29.72■■■□□ 2.35
UBE2E3-202ENST00000410062 DCAF8Q5TAQ9 597 aa29.72■■■□□ 2.35
UBE2E3-202ENST00000410062 RAD17O75943 681 aa29.71■■■□□ 2.35
UBE2E3-202ENST00000410062 GPC2Q8N158 579 aa29.71■■■□□ 2.35
UBE2E3-202ENST00000410062 ATG9AQ7Z3C6 839 aa29.7■■■□□ 2.35
UBE2E3-202ENST00000410062 COPRSQ9NQ92 184 aa29.7■■■□□ 2.35
UBE2E3-202ENST00000410062 KCNQ5Q9NR82 932 aa29.7■■■□□ 2.35
UBE2E3-202ENST00000410062 WDR90Q96KV7 1748 aa29.7■■■□□ 2.34
UBE2E3-202ENST00000410062 VGLL2Q8N8G2 317 aa29.69■■■□□ 2.34
UBE2E3-202ENST00000410062 POTECB2RU33 542 aa29.68■■■□□ 2.34
UBE2E3-202ENST00000410062 KIF3CO14782 793 aa29.68■■■□□ 2.34
UBE2E3-202ENST00000410062 ATP8B2P98198 1209 aa29.68■■■□□ 2.34
UBE2E3-202ENST00000410062 CIAPIN1Q6FI81 312 aa29.68■■■□□ 2.34
UBE2E3-202ENST00000410062 IRS2Q9Y4H2 1338 aa29.67■■■□□ 2.34
UBE2E3-202ENST00000410062 CIAO1O76071 339 aa29.67■■■□□ 2.34
UBE2E3-202ENST00000410062 ZBTB40Q9NUA8 1239 aa29.67■■■□□ 2.34
UBE2E3-202ENST00000410062 FBXO3Q9UK99 471 aa29.67■■■□□ 2.34
UBE2E3-202ENST00000410062 SCN9AQ15858 1988 aa29.66■■■□□ 2.34
UBE2E3-202ENST00000410062 PDE8BO95263 885 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms