RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SUPT20HQ8NEM7 779 aa28.06■■■□□ 2.08
PTCD3-203ENST00000409783 VPS33BQ9H267 617 aa28.06■■■□□ 2.08
PTCD3-203ENST00000409783 TBC1D16Q8TBP0 767 aa28.05■■■□□ 2.08
PTCD3-203ENST00000409783 MPHOSPH8Q99549 860 aa28.05■■■□□ 2.08
PTCD3-203ENST00000409783 XDHP47989 1333 aa28.04■■■□□ 2.08
PTCD3-203ENST00000409783 RFX5P48382 616 aaPredicted RBP28.04■■■□□ 2.08
PTCD3-203ENST00000409783 KIAA2012Q0VF49 1180 aa28.04■■■□□ 2.08
PTCD3-203ENST00000409783 AOC3Q16853 763 aa28.04■■■□□ 2.08
PTCD3-203ENST00000409783 HDAC5Q9UQL6 1122 aa28.04■■■□□ 2.08
PTCD3-203ENST00000409783 ZBTB7BO15156 539 aaPredicted RBP28.03■■■□□ 2.08
PTCD3-203ENST00000409783 PPIP5K2O43314 1243 aa28.03■■■□□ 2.08
PTCD3-203ENST00000409783 MS4A1P11836 297 aa28.03■■■□□ 2.08
PTCD3-203ENST00000409783 ITPRIPQ8IWB1 547 aa28.03■■■□□ 2.08
PTCD3-203ENST00000409783 ANKIB1Q9P2G1 1089 aa28.03■■■□□ 2.08
PTCD3-203ENST00000409783 WTIPA6NIX2 430 aaPredicted RBP28.02■■■□□ 2.08
PTCD3-203ENST00000409783 LARGE2Q8N3Y3 721 aa28.02■■■□□ 2.08
PTCD3-203ENST00000409783 C6orf229H3BNL8 230 aa28.01■■■□□ 2.07
PTCD3-203ENST00000409783 FZD9O00144 591 aa28.01■■■□□ 2.07
PTCD3-203ENST00000409783 CHRNDQ07001 517 aa28.01■■■□□ 2.07
PTCD3-203ENST00000409783 LDHAL6AQ6ZMR3 332 aa28.01■■■□□ 2.07
PTCD3-203ENST00000409783 GPR101Q96P66 508 aaPredicted RBP28.01■■■□□ 2.07
PTCD3-203ENST00000409783 PUS3Q9BZE2 481 aaKnown RBP28.01■■■□□ 2.07
PTCD3-203ENST00000409783 GGA1Q9UJY5 639 aa28.01■■■□□ 2.07
PTCD3-203ENST00000409783 UFL1O94874 794 aa28■■■□□ 2.07
PTCD3-203ENST00000409783 TAF7LQ5H9L4 462 aa28■■■□□ 2.07
PTCD3-203ENST00000409783 C20orf194Q5TEA3 1177 aa28■■■□□ 2.07
PTCD3-203ENST00000409783 GNAI2P04899 355 aa27.99■■■□□ 2.07
PTCD3-203ENST00000409783 ATP2B4P23634 1241 aa27.99■■■□□ 2.07
PTCD3-203ENST00000409783 MTX1Q13505 466 aa27.99■■■□□ 2.07
PTCD3-203ENST00000409783 WASHC4Q2M389 1173 aa27.99■■■□□ 2.07
PTCD3-203ENST00000409783 KLHDC4Q8TBB5 520 aa27.99■■■□□ 2.07
PTCD3-203ENST00000409783 RIPOR2Q9Y4F9 1068 aa27.99■■■□□ 2.07
PTCD3-203ENST00000409783 GLTPD2A6NH11 291 aa27.98■■■□□ 2.07
PTCD3-203ENST00000409783 PTPN12Q05209 780 aaKnown RBP27.98■■■□□ 2.07
PTCD3-203ENST00000409783 PDE3AQ14432 1141 aa27.98■■■□□ 2.07
PTCD3-203ENST00000409783 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.98■■■□□ 2.07
PTCD3-203ENST00000409783 JDP2Q8WYK2 163 aa27.98■■■□□ 2.07
PTCD3-203ENST00000409783 ANKRD2Q9GZV1 360 aa27.98■■■□□ 2.07
PTCD3-203ENST00000409783 ZNF541Q9H0D2 1346 aa27.97■■■□□ 2.07
PTCD3-203ENST00000409783 MVPQ14764 893 aaKnown RBP27.97■■■□□ 2.07
PTCD3-203ENST00000409783 ZNF526Q8TF50 670 aaPredicted RBP27.97■■■□□ 2.07
PTCD3-203ENST00000409783 EYA3Q99504 573 aa27.97■■■□□ 2.07
PTCD3-203ENST00000409783 CNNM1Q9NRU3 951 aa27.97■■■□□ 2.07
PTCD3-203ENST00000409783 RIMBP2O15034 1052 aa27.96■■■□□ 2.07
PTCD3-203ENST00000409783 LRRC24Q50LG9 513 aa27.96■■■□□ 2.07
PTCD3-203ENST00000409783 NIM1KQ8IY84 436 aa27.96■■■□□ 2.07
PTCD3-203ENST00000409783 HELBQ8NG08 1087 aaPredicted RBP27.96■■■□□ 2.07
PTCD3-203ENST00000409783 LEMD3Q9Y2U8 911 aa27.96■■■□□ 2.07
PTCD3-203ENST00000409783 COG6Q9Y2V7 657 aa27.96■■■□□ 2.07
PTCD3-203ENST00000409783 TAF5LO75529 589 aa27.95■■■□□ 2.06
PTCD3-203ENST00000409783 SNAP23O00161 211 aa27.94■■■□□ 2.06
PTCD3-203ENST00000409783 ZNRF3Q9ULT6 936 aa27.94■■■□□ 2.06
PTCD3-203ENST00000409783 WDR90Q96KV7 1748 aa27.94■■■□□ 2.06
PTCD3-203ENST00000409783 ZNF804BA4D1E1 1349 aa27.93■■■□□ 2.06
PTCD3-203ENST00000409783 IRS2Q9Y4H2 1338 aa27.93■■■□□ 2.06
PTCD3-203ENST00000409783 YDJCA8MPS7 323 aa27.93■■■□□ 2.06
PTCD3-203ENST00000409783 ZC3H12CQ9C0D7 883 aaKnown RBP27.93■■■□□ 2.06
PTCD3-203ENST00000409783 C1orf115Q9H7X2 142 aa27.93■■■□□ 2.06
PTCD3-203ENST00000409783 GPBP1L1Q9HC44 474 aaPredicted RBP27.93■■■□□ 2.06
PTCD3-203ENST00000409783 MED23Q9ULK4 1368 aa27.93■■■□□ 2.06
PTCD3-203ENST00000409783 KDM2BQ8NHM5 1336 aa27.92■■■□□ 2.06
PTCD3-203ENST00000409783 SCN9AQ15858 1988 aa27.92■■■□□ 2.06
PTCD3-203ENST00000409783 DDNO94850 711 aaPredicted RBP27.92■■■□□ 2.06
PTCD3-203ENST00000409783 RRP1P56182 461 aaKnown RBP27.92■■■□□ 2.06
PTCD3-203ENST00000409783 DPY19L2Q6NUT2 758 aa27.92■■■□□ 2.06
PTCD3-203ENST00000409783 TXNRD3Q86VQ6 643 aa27.92■■■□□ 2.06
PTCD3-203ENST00000409783 COPRSQ9NQ92 184 aa27.92■■■□□ 2.06
PTCD3-203ENST00000409783 DDX19BQ9UMR2 479 aa27.92■■■□□ 2.06
PTCD3-203ENST00000409783 PNMA6EA0A0J9YXQ4 647 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 EYA2O00167 538 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 SRGAP3O43295 1099 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 KLRK1P26718 216 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 ATG9AQ7Z3C6 839 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 VGLL2Q8N8G2 317 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 DBNDD1Q9H9R9 158 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 NMRK2Q9NPI5 230 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 PA2G4Q9UQ80 394 aaKnown RBP27.91■■■□□ 2.06
PTCD3-203ENST00000409783 MROH5Q6ZUA9 1318 aa27.91■■■□□ 2.06
PTCD3-203ENST00000409783 DOK7Q18PE1 504 aa27.9■■■□□ 2.06
PTCD3-203ENST00000409783 FBXO3Q9UK99 471 aa27.9■■■□□ 2.06
PTCD3-203ENST00000409783 POTECB2RU33 542 aa27.89■■■□□ 2.06
PTCD3-203ENST00000409783 EIF6P56537 245 aaKnown RBP27.89■■■□□ 2.06
PTCD3-203ENST00000409783 CXCL9Q07325 125 aa27.89■■■□□ 2.06
PTCD3-203ENST00000409783 C15orf52Q6ZUT6 534 aaKnown RBP27.89■■■□□ 2.06
PTCD3-203ENST00000409783 ZBTB40Q9NUA8 1239 aa27.89■■■□□ 2.06
PTCD3-203ENST00000409783 PSME4Q14997 1843 aa27.88■■■□□ 2.05
PTCD3-203ENST00000409783 ECE2O60344 883 aa27.88■■■□□ 2.05
PTCD3-203ENST00000409783 ATP8B2P98198 1209 aa27.88■■■□□ 2.05
PTCD3-203ENST00000409783 POLA2Q14181 598 aa27.88■■■□□ 2.05
PTCD3-203ENST00000409783 L3MBTL3Q96JM7 780 aaPredicted RBP27.88■■■□□ 2.05
PTCD3-203ENST00000409783 KIF3CO14782 793 aa27.87■■■□□ 2.05
PTCD3-203ENST00000409783 CIAO1O76071 339 aa27.87■■■□□ 2.05
PTCD3-203ENST00000409783 GPC2Q8N158 579 aa27.87■■■□□ 2.05
PTCD3-203ENST00000409783 SIL1Q9H173 461 aa27.87■■■□□ 2.05
PTCD3-203ENST00000409783 KCNQ5Q9NR82 932 aa27.87■■■□□ 2.05
PTCD3-203ENST00000409783 KCNJ4P48050 445 aa27.86■■■□□ 2.05
PTCD3-203ENST00000409783 UBE4AQ14139 1066 aa27.86■■■□□ 2.05
PTCD3-203ENST00000409783 METTL24Q5JXM2 366 aa27.86■■■□□ 2.05
PTCD3-203ENST00000409783 SSH3Q8TE77 659 aa27.86■■■□□ 2.05
PTCD3-203ENST00000409783 RRAGCQ9HB90 399 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms