RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 TOMM70O94826 608 aa6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 LAS1LQ9Y4W2 734 aaKnown RBP6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 SH3TC1Q8TE82 1336 aa6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 GRIPAP1Q4V328 841 aa6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 FBXL16Q8N461 479 aa6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 USP35Q9P2H5 1018 aa6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 ZNF652Q9Y2D9 606 aa6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 RTCBQ9Y3I0 505 aaKnown RBP6.07□□□□□ -1.44
R3HDM1-203ENST00000409606 ELL2O00472 640 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 TTC22Q5TAA0 569 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 KLRG1Q96E93 195 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 UTP14AQ9BVJ6 771 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 BRIP1Q9BX63 1249 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 TAOK2Q9UL54 1235 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 ZBTB7CA1YPR0 619 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 UBTFL1P0CB47 393 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 ATP5JP18859 108 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 ERC1Q8IUD2 1116 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 ITPRIPQ8IWB1 547 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 PRDM10Q9NQV6 1147 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 ROBO3Q96MS0 1386 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 BAZ2AQ9UIF9 1905 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 TCRBV5S4A2TA0A5A2 114 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 FOXP2O15409 715 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 PTCD1O75127 700 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 USPL1Q5W0Q7 1092 aa6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 FTSJ3Q8IY81 847 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-203ENST00000409606 RPAP1Q9BWH6 1393 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 EYA2O00167 538 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 SRGNP10124 158 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 IL1R1P14778 569 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 IL15P40933 162 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 TSGA10IPQ3SY00 556 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 HSP90AB4PQ58FF6 505 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 TRAPPC3LQ5T215 181 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 ALDH8A1Q9H2A2 487 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 TRPM7Q96QT4 1865 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 HSP90B1P14625 803 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 MYL6BP14649 208 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 RBM25P49756 843 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 ERFEQ4G0M1 354 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 FBXO33Q7Z6M2 555 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 RHPN1Q8TCX5 695 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 KIF1BPQ96EK5 621 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 KIF2CQ99661 725 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 BACH2Q9BYV9 841 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 EIF2S2P20042 333 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 NLGN1Q8N2Q7 840 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 HAUS7Q99871 368 aa6.05□□□□□ -1.44
R3HDM1-203ENST00000409606 PDE1AP54750 535 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 NEXNQ0ZGT2 675 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 RIC3Q7Z5B4 369 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 MRIQ9BWK5 157 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 GREM2Q9H772 168 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 FAM205AQ6ZU69 1335 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 LCTP09848 1927 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 SEMA3EO15041 775 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 NOVP48745 357 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 TNNI3KQ59H18 835 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 FAM182BQ5T319 152 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 SRP68Q9UHB9 627 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 FPGT-TNNI3KV9GXZ4 949 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 RAD50Q92878 1312 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 ZNF236Q9UL36 1845 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 IRS4O14654 1257 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 GNPATO15228 680 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 HMMRO75330 724 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 FGRP09769 529 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 MMP14P50281 582 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 GRAPQ13588 217 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 GRAPLQ8TC17 118 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 FRAT1Q92837 279 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 EAF2Q96CJ1 260 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 DBNLQ9UJU6 430 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 MYH4Q9Y623 1939 aa6.04□□□□□ -1.44
R3HDM1-203ENST00000409606 DDIT3P35638 169 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 SYNE4Q8N205 404 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 ZBED3Q96IU2 234 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 PDE8BO95263 885 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 SP8Q8IXZ3 490 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 C16orf71Q8IYS4 520 aaPredicted RBP6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 RGS22Q8NE09 1264 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 LRRCC1Q9C099 1032 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 TGFB2P61812 414 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 UBE4AQ14139 1066 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 UBE3BQ7Z3V4 1068 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 ZNF384Q8TF68 577 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 PSMD1Q99460 953 aa6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 RBM42Q9BTD8 480 aaKnown RBP6.03□□□□□ -1.44
R3HDM1-203ENST00000409606 ZBTB3Q9H5J0 574 aa6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 MKRN1Q9UHC7 482 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 FAM161AQ3B820 660 aa6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 LMBR1LQ6UX01 489 aa6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 FAM163AQ96GL9 167 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 CDC5LQ99459 802 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 PGAP2Q9UHJ9 254 aa6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 MINPP1Q9UNW1 487 aa6.02□□□□□ -1.45
R3HDM1-203ENST00000409606 ATP6V0A2Q9Y487 856 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms