RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 IFT74Q96LB3 600 aa15.77■□□□□ 0.11
RERE-204ENST00000400908 SPAG5Q96R06 1193 aa15.77■□□□□ 0.11
RERE-204ENST00000400908 NUF2Q9BZD4 464 aa15.77■□□□□ 0.11
RERE-204ENST00000400908 POLR3DP05423 398 aaPredicted RBP15.76■□□□□ 0.11
RERE-204ENST00000400908 CABP4P57796 275 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 SSH1Q8WYL5 1049 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 LRRC27Q9C0I9 530 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 TXNDC16Q9P2K2 825 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 AKAP2Q9Y2D5 859 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 BIN1O00499 593 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 WDHD1O75717 1129 aaPredicted RBP15.76■□□□□ 0.11
RERE-204ENST00000400908 ZC3H6P61129 1189 aaKnown RBP15.76■□□□□ 0.11
RERE-204ENST00000400908 SSRP1Q08945 709 aaKnown RBP15.76■□□□□ 0.11
RERE-204ENST00000400908 C10orf67Q8IYJ2 551 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 CRACR2BQ8N4Y2 399 aaPredicted RBP15.76■□□□□ 0.11
RERE-204ENST00000400908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.76■□□□□ 0.11
RERE-204ENST00000400908 BTBD11A6QL63 1104 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 HMGB1P1B2RPK0 211 aaPredicted RBP15.76■□□□□ 0.11
RERE-204ENST00000400908 NLRP5P59047 1200 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 ADGRL2O95490 1459 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 MGEA5O60502 916 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 KCNH5Q8NCM2 988 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 ASXL1Q8IXJ9 1541 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 TNRQ92752 1358 aa15.76■□□□□ 0.11
RERE-204ENST00000400908 N4BP3O15049 544 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 ZEB2O60315 1214 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 HMGB1P09429 215 aaKnown RBP15.75■□□□□ 0.11
RERE-204ENST00000400908 CLNS1AP54105 237 aaKnown RBP15.75■□□□□ 0.11
RERE-204ENST00000400908 ATP2A2P16615 1042 aaKnown RBP15.75■□□□□ 0.11
RERE-204ENST00000400908 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
RERE-204ENST00000400908 PPP1R12CQ9BZL4 782 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 VPS18Q9P253 973 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 ARHGEF12Q9NZN5 1544 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 TEX14Q8IWB6 1497 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 PFDN4Q9NQP4 134 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 GUCY1B3Q02153 619 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 CEP85LQ5SZL2 805 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 TACC3Q9Y6A5 838 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 USH1CQ9Y6N9 552 aa15.75■□□□□ 0.11
RERE-204ENST00000400908 GOLGA1Q92805 767 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 SLC12A7Q9Y666 1083 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 IGHMBP2P38935 993 aaKnown RBP15.74■□□□□ 0.11
RERE-204ENST00000400908 ZNF165P49910 485 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 PIP4K2BP78356 416 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
RERE-204ENST00000400908 IL1RAPL2Q9NP60 686 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 KCNK9Q9NPC2 374 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 RBM28Q9NW13 759 aaKnown RBP15.74■□□□□ 0.11
RERE-204ENST00000400908 TESK2Q96S53 571 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 TRIM47Q96LD4 638 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 ANKRD36BQ8N2N9 1353 aa15.74■□□□□ 0.11
RERE-204ENST00000400908 MINDY4BA8MYZ0 360 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 GBP1P32455 592 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 DNAI1Q9UI46 699 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 TUBB4AP04350 444 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 MYL6BP14649 208 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 PRDM11Q9NQV5 511 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 TUBB4BP68371 445 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 ERCC6LQ2NKX8 1250 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
RERE-204ENST00000400908 ABCF2Q9UG63 623 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 FAM169AQ9Y6X4 670 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 TSNAXIP1Q2TAA8 658 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 TMCO4Q5TGY1 634 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
RERE-204ENST00000400908 CTAGE1Q96RT6 745 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 PRR16Q569H4 304 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 USP37Q86T82 979 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
RERE-204ENST00000400908 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 IQCA1Q86XH1 822 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 RAB3IPQ96QF0 476 aaPredicted RBP15.72■□□□□ 0.11
RERE-204ENST00000400908 NAPBQ9H115 298 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 VPS52Q8N1B4 723 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 PRPF31Q8WWY3 499 aaKnown RBP15.72■□□□□ 0.11
RERE-204ENST00000400908 CCT6BQ92526 530 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 RMND1Q9NWS8 449 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 PARD3Q8TEW0 1356 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 RPAP2Q8IXW5 612 aaPredicted RBP15.72■□□□□ 0.11
RERE-204ENST00000400908 CTAGE9A4FU28 777 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 SMIM23A6NLE4 172 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 GOLGA8AA7E2F4 631 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 GOLGA8BA8MQT2 603 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 PLCD3Q8N3E9 789 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 FAM76AQ8TAV0 307 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 BICD1Q96G01 975 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 VCXQ9H320 206 aa15.72■□□□□ 0.11
RERE-204ENST00000400908 MTRF1LQ9UGC7 380 aaKnown RBP15.72■□□□□ 0.11
RERE-204ENST00000400908 UTP14AQ9BVJ6 771 aaKnown RBP15.71■□□□□ 0.11
RERE-204ENST00000400908 TSPYL2Q9H2G4 693 aaPredicted RBP15.71■□□□□ 0.11
RERE-204ENST00000400908 MMRN2Q9H8L6 949 aa15.71■□□□□ 0.11
RERE-204ENST00000400908 WDR70Q9NW82 654 aa15.71■□□□□ 0.11
RERE-204ENST00000400908 LRPPRCP42704 1394 aaKnown RBP15.71■□□□□ 0.11
RERE-204ENST00000400908 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
RERE-204ENST00000400908 BUB1BO60566 1050 aaPredicted RBP15.71■□□□□ 0.11
RERE-204ENST00000400908 CCDC102BQ68D86 513 aa15.71■□□□□ 0.11
RERE-204ENST00000400908 SKAP1Q86WV1 359 aa15.71■□□□□ 0.11
RERE-204ENST00000400908 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms