RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 MTX1Q13505 466 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 TTC39AQ5SRH9 613 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 CCDC82Q8N4S0 544 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 GJB4Q9NTQ9 266 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 KIF3AQ9Y496 699 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 PAG1Q9NWQ8 432 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 CLIP2Q9UDT6 1046 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 PTPDC1A2A3K4 754 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
PPP4R1-202ENST00000400555 RGPD8O14715 1765 aaPredicted RBP14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 FSIP1Q8NA03 581 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 STK38Q15208 465 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 MRVI1Q9Y6F6 885 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 V9GYY5 206 aaPredicted RBP14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 REREQ9P2R6 1566 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 PXDNQ92626 1479 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 SCRN1Q12765 414 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 PI16Q6UXB8 463 aa14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 RALYLQ86SE5 291 aaKnown RBP14.89□□□□□ -0.03
PPP4R1-202ENST00000400555 CHMP4CQ96CF2 233 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 CYP27B1O15528 508 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 IDH1O75874 414 aaKnown RBP14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 CFAP45Q9UL16 551 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 ERBB3P21860 1342 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 A0A1B0GVL5 298 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 DYNC1I1O14576 645 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 HSP90AA4PQ58FG1 418 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 PGBD1Q96JS3 809 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 CWC25Q9NXE8 425 aaPredicted RBP14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 HMG20BQ9P0W2 317 aa14.88□□□□□ -0.03
PPP4R1-202ENST00000400555 SMC2O95347 1197 aa14.87□□□□□ -0.03
PPP4R1-202ENST00000400555 A0A1B0GUL7 405 aa14.87□□□□□ -0.03
PPP4R1-202ENST00000400555 ATP5JP18859 108 aa14.87□□□□□ -0.03
PPP4R1-202ENST00000400555 ARID5BQ14865 1188 aa14.87□□□□□ -0.03
PPP4R1-202ENST00000400555 RRP12Q5JTH9 1297 aaKnown RBP14.87□□□□□ -0.03
PPP4R1-202ENST00000400555 GTF3C6Q969F1 213 aa14.87□□□□□ -0.03
PPP4R1-202ENST00000400555 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
PPP4R1-202ENST00000400555 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 SYNE3Q6ZMZ3 975 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 TMEM87AQ8NBN3 555 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 DDX19AQ9NUU7 478 aaKnown RBP14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 HMGN5P82970 282 aaKnown RBP14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 NFXL1Q6ZNB6 911 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 SYNE4Q8N205 404 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 USP28Q96RU2 1077 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 MARCKSP29966 332 aaPredicted RBP14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 PPP4R3BQ5MIZ7 849 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 STOX1Q6ZVD7 989 aa14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 DHX32Q7L7V1 743 aaKnown RBP14.86□□□□□ -0.03
PPP4R1-202ENST00000400555 TNNT1P13805 278 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 ADORA1P30542 326 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 KBTBD3Q8NAB2 608 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 GOLGA8BA8MQT2 603 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 HSPA2P54652 639 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 CNNM1Q9NRU3 951 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 EPB41L2O43491 1005 aaKnown RBP14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 KCNF1Q9H3M0 494 aa14.85□□□□□ -0.03
PPP4R1-202ENST00000400555 KLF18A0A0U1RQI7 1052 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 PTPN21Q16825 1174 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 DCAF5Q96JK2 942 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 COPRSQ9NQ92 184 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 AKAP12Q02952 1782 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 SETD1AO15047 1707 aaKnown RBP14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 METTL24Q5JXM2 366 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 C8orf76Q96K31 380 aa14.84□□□□□ -0.03
PPP4R1-202ENST00000400555 E7EWF7 191 aa14.83□□□□□ -0.03
PPP4R1-202ENST00000400555 TRDNQ13061 729 aa14.83□□□□□ -0.03
PPP4R1-202ENST00000400555 C19orf44Q9H6X5 657 aa14.83□□□□□ -0.03
PPP4R1-202ENST00000400555 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.03
PPP4R1-202ENST00000400555 ZHX1Q9UKY1 873 aaPredicted RBP14.83□□□□□ -0.03
PPP4R1-202ENST00000400555 NAA30Q147X3 362 aaPredicted RBP14.83□□□□□ -0.04
PPP4R1-202ENST00000400555 MYRIPQ8NFW9 859 aa14.83□□□□□ -0.04
PPP4R1-202ENST00000400555 ZNF396Q96N95 335 aaPredicted RBP14.83□□□□□ -0.04
PPP4R1-202ENST00000400555 CLSTN2Q9H4D0 955 aa14.83□□□□□ -0.04
PPP4R1-202ENST00000400555 C11orf57Q6ZUT1 292 aaPredicted RBP14.83□□□□□ -0.04
PPP4R1-202ENST00000400555 HSPD1P10809 573 aaKnown RBP14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 CREBRFQ8IUR6 639 aa14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 FAM177A1Q8N128 213 aaPredicted RBP14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 PDCL2Q8N4E4 241 aa14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 USP42Q9H9J4 1324 aaKnown RBP14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 MICU3Q86XE3 530 aa14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 ZBTB9Q96C00 473 aa14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 HAUS7Q99871 368 aa14.82□□□□□ -0.04
PPP4R1-202ENST00000400555 UBR1Q8IWV7 1749 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 NBPF26B4DH59 902 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 ZNF75DP51815 510 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 IMMTQ16891 758 aaKnown RBP14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 NBPF10Q6P3W6 841 aaKnown RBP14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 LDHAL6AQ6ZMR3 332 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 NBPF15Q8N660 670 aa14.81□□□□□ -0.04
PPP4R1-202ENST00000400555 ZCRB1Q8TBF4 217 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms