RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TLR7Q9NYK1 1049 aaKnown RBP16.48■□□□□ 0.23
SCAF4-202ENST00000399804 HSPA4P34932 840 aa16.48■□□□□ 0.23
SCAF4-202ENST00000399804 SF3B2Q13435 895 aaKnown RBP16.48■□□□□ 0.23
SCAF4-202ENST00000399804 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
SCAF4-202ENST00000399804 CYP7A1P22680 504 aa16.48■□□□□ 0.23
SCAF4-202ENST00000399804 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
SCAF4-202ENST00000399804 ZBTB38Q8NAP3 1195 aaPredicted RBP16.48■□□□□ 0.23
SCAF4-202ENST00000399804 C8orf76Q96K31 380 aa16.48■□□□□ 0.23
SCAF4-202ENST00000399804 TAF5LO75529 589 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 MCM5P33992 734 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 USP5P45974 858 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
SCAF4-202ENST00000399804 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 MAP3K15Q6ZN16 1313 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 DTNBO60941 627 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 ZSCAN22P10073 491 aaPredicted RBP16.47■□□□□ 0.23
SCAF4-202ENST00000399804 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
SCAF4-202ENST00000399804 MICU3Q86XE3 530 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 PUS3Q9BZE2 481 aaKnown RBP16.47■□□□□ 0.23
SCAF4-202ENST00000399804 SCAND2PQ9GZW5 306 aaPredicted RBP16.47■□□□□ 0.23
SCAF4-202ENST00000399804 DBNLQ9UJU6 430 aaKnown RBP16.47■□□□□ 0.23
SCAF4-202ENST00000399804 SLC27A2O14975 620 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 CCDC144CPQ8IYA2 1237 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 INTS4Q96HW7 963 aaKnown RBP16.47■□□□□ 0.23
SCAF4-202ENST00000399804 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
SCAF4-202ENST00000399804 HMGB2P26583 209 aaKnown RBP16.46■□□□□ 0.23
SCAF4-202ENST00000399804 ATP2B2Q01814 1243 aa16.46■□□□□ 0.23
SCAF4-202ENST00000399804 NYXQ9GZU5 481 aa16.46■□□□□ 0.23
SCAF4-202ENST00000399804 HOOK1Q9UJC3 728 aaKnown RBP16.46■□□□□ 0.23
SCAF4-202ENST00000399804 SASH1O94885 1247 aa16.46■□□□□ 0.23
SCAF4-202ENST00000399804 KLHL40Q2TBA0 621 aa16.46■□□□□ 0.23
SCAF4-202ENST00000399804 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
SCAF4-202ENST00000399804 RNF41Q9H4P4 317 aaPredicted RBP16.46■□□□□ 0.23
SCAF4-202ENST00000399804 PPP1R1BQ9UD71 204 aaPredicted RBP16.46■□□□□ 0.23
SCAF4-202ENST00000399804 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.22
SCAF4-202ENST00000399804 CCDC192P0DO97 292 aa16.46■□□□□ 0.22
SCAF4-202ENST00000399804 PTH1RQ03431 593 aa16.46■□□□□ 0.22
SCAF4-202ENST00000399804 TMEM67Q5HYA8 995 aa16.46■□□□□ 0.22
SCAF4-202ENST00000399804 JMYQ8N9B5 988 aa16.46■□□□□ 0.22
SCAF4-202ENST00000399804 IFT172Q9UG01 1749 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 A0A0D9SFI3 127 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 TPD52L1Q16890 204 aaPredicted RBP16.45■□□□□ 0.22
SCAF4-202ENST00000399804 MFSD6Q6ZSS7 791 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 RBM27Q9P2N5 1060 aaKnown RBP16.45■□□□□ 0.22
SCAF4-202ENST00000399804 ORC3Q9UBD5 711 aaPredicted RBP16.45■□□□□ 0.22
SCAF4-202ENST00000399804 RBM5P52756 815 aaKnown RBP eCLIP16.45■□□□□ 0.22
SCAF4-202ENST00000399804 PTPN12Q05209 780 aaKnown RBP16.45■□□□□ 0.22
SCAF4-202ENST00000399804 NUP62CLQ9H1M0 184 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 CTSWP56202 376 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
SCAF4-202ENST00000399804 ITSN1Q15811 1721 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 MPNDQ8N594 471 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 MAGEB6Q8N7X4 407 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
SCAF4-202ENST00000399804 HELLSQ9NRZ9 838 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 SLC4A4Q9Y6R1 1079 aa16.45■□□□□ 0.22
SCAF4-202ENST00000399804 KCNQ4P56696 695 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 CAMK4Q16566 473 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 MIGA1Q8NAN2 632 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 ADCY9O60503 1353 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 CD2BP2O95400 341 aaKnown RBP16.44■□□□□ 0.22
SCAF4-202ENST00000399804 ZAP70P43403 619 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
SCAF4-202ENST00000399804 MKNK2Q9HBH9 465 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 GOLGA8AA7E2F4 631 aa16.44■□□□□ 0.22
SCAF4-202ENST00000399804 POLR3DP05423 398 aaPredicted RBP16.44■□□□□ 0.22
SCAF4-202ENST00000399804 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
SCAF4-202ENST00000399804 ZNF219Q9P2Y4 722 aaPredicted RBP16.44■□□□□ 0.22
SCAF4-202ENST00000399804 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
SCAF4-202ENST00000399804 GREM2Q9H772 168 aa16.43■□□□□ 0.22
SCAF4-202ENST00000399804 CEMIPQ8WUJ3 1361 aa16.43■□□□□ 0.22
SCAF4-202ENST00000399804 IL6STP40189 918 aaPredicted RBP16.43■□□□□ 0.22
SCAF4-202ENST00000399804 SLC4A8Q2Y0W8 1093 aa16.43■□□□□ 0.22
SCAF4-202ENST00000399804 PES1O00541 588 aaKnown RBP16.43■□□□□ 0.22
SCAF4-202ENST00000399804 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
SCAF4-202ENST00000399804 ATG3Q9NT62 314 aa16.43■□□□□ 0.22
SCAF4-202ENST00000399804 NSFL1CQ9UNZ2 370 aaKnown RBP16.43■□□□□ 0.22
SCAF4-202ENST00000399804 PRC1O43663 620 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 MTX1Q13505 466 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 NAA16Q6N069 864 aaPredicted RBP16.42■□□□□ 0.22
SCAF4-202ENST00000399804 PANK2Q9BZ23 570 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 CNPY2Q9Y2B0 182 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 CCDC196A0A1B0GTZ2 297 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 SYT1P21579 422 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 ST5P78524 1137 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 LPIN2Q92539 896 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 JAG2Q9Y219 1238 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 NBPF26B4DH59 902 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 NBPF10Q6P3W6 841 aaKnown RBP16.42■□□□□ 0.22
SCAF4-202ENST00000399804 NBPF15Q8N660 670 aa16.42■□□□□ 0.22
SCAF4-202ENST00000399804 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms