RNA–Protein interactions for RNA: ENST00000399300.6

RBM12B-201, Transcript of RNA binding motif protein 12B, human

APPRIS P2 TSL 2 BASIC

Gene RBM12B, Length 7,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM12B-201	ENST00000399300	ST5	P78524	1137 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	TTLL3	Q9Y4R7	772 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	ZSCAN30	Q86W11	494 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	CABP1	Q9NZU7	370 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	CCDC7	Q96M83	1385 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	SNRK	Q9NRH2	765 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	RABGAP1	Q9Y3P9	1069 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	GSDMD	P57764	484 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	SMARCC2	Q8TAQ2	1214 aa		13.53	□□□□□ -0.24
RBM12B-201	ENST00000399300	GOLGA6L9	A6NEM1	432 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	GOLIM4	O00461	696 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	TMEM57	Q8N5G2	664 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	NGLY1	Q96IV0	654 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	FRMD4B	Q9Y2L6	1034 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	NOC2L	Q9Y3T9	749 aa	Known RBP	13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	EHBP1	Q8NDI1	1231 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.52	□□□□□ -0.24	4e-7	■□□□□ 11.3
RBM12B-201	ENST00000399300	MCM4	P33991	863 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	PKD2L1	Q9P0L9	805 aa		13.52	□□□□□ -0.24
RBM12B-201	ENST00000399300	ADCY5	O95622	1261 aa		13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	SH2D4B	Q5SQS7	431 aa		13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	GJB2	P29033	226 aa		13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	CYLC1	P35663	651 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	PRPH	P41219	470 aa		13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	UBASH3A	P57075	661 aa		13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	ZBTB24	O43167	697 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	HMGB1	P09429	215 aa	Known RBP	13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	XRCC6	P12956	609 aa	Known RBP eCLIP	13.52	□□□□□ -0.25	2e-10	■□□□□ 11.3
RBM12B-201	ENST00000399300	INTS8	Q75QN2	995 aa	Known RBP	13.52	□□□□□ -0.25
RBM12B-201	ENST00000399300	TXNDC9	O14530	226 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	INF2	Q27J81	1249 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	MCM7	P33993	719 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	MSANTD4	Q8NCY6	345 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	BICDL2	A1A5D9	508 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	PPP1R12C	Q9BZL4	782 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	FAM204A	Q9H8W3	233 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	OPA1	O60313	960 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	ITIH3	Q06033	890 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	MVP	Q14764	893 aa	Known RBP	13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	MX1	P20591	662 aa		13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	PDCD7	Q8N8D1	485 aa	Known RBP	13.51	□□□□□ -0.25
RBM12B-201	ENST00000399300	ATP6V1E1	P36543	226 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	IFIT1B	Q5T764	474 aa	Known RBP	13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	ZNF408	Q9H9D4	720 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	RMND1	Q9NWS8	449 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	GLRX3	O76003	335 aa	Known RBP	13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	VIM	P08670	466 aa	Known RBP	13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	PSPC1	Q8WXF1	523 aa	Known RBP	13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	GTF3C6	Q969F1	213 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	BAG1	Q99933	345 aa	Predicted RBP	13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	HDAC9	Q9UKV0	1011 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	ERCC6L	Q2NKX8	1250 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	ASIC1	P78348	528 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	NEDD9	Q14511	834 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	SPDYE2	Q495Y8	402 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	KANK3	Q6NY19	840 aa		13.5	□□□□□ -0.25
RBM12B-201	ENST00000399300	PPP2R1A	P30153	589 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	JARID2	Q92833	1246 aa	Predicted RBP	13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	NCAPG	Q9BPX3	1015 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	SAMD15	Q9P1V8	674 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	CTAGE15	A4D2H0	777 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	CTAGE8	P0CG41	777 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	CTAGE6	Q86UF2	777 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	CTAGE4	Q8IX94	777 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	GINS2	Q9Y248	185 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	BACH1	O14867	736 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	INPP1	P49441	399 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	ZNF131	P52739	623 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	ZBTB3	Q9H5J0	574 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	HMGB2	P26583	209 aa	Known RBP	13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	CLUL1	Q15846	466 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	PPFIBP2	Q8ND30	876 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	GOLGA1	Q92805	767 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	MGEA5	O60502	916 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	LPXN	O60711	386 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	ATP11A	P98196	1134 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	VCX3B	Q9H321	246 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	C4orf50	Q6ZRC1	276 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	LCA5	Q86VQ0	697 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	VPS18	Q9P253	973 aa		13.49	□□□□□ -0.25
RBM12B-201	ENST00000399300	MAN1A1	P33908	653 aa		13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	CCDC102B	Q68D86	513 aa		13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	ANO3	Q9BYT9	981 aa		13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	RBM27	Q9P2N5	1060 aa	Known RBP	13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	C6orf50	Q9HD87	102 aa		13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	ARHGEF2	Q92974	986 aa	Known RBP	13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	ZNF830	Q96NB3	372 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	ORC3	Q9UBD5	711 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	ABCC8	Q09428	1581 aa		13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	LDHC	P07864	332 aa		13.48	□□□□□ -0.25
RBM12B-201	ENST00000399300	ZNF853	P0CG23	659 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms