RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 SGIP1Q9BQI5 828 aa28.97■■■□□ 2.23
TSPAN4-202ENST00000397396 SPON1Q9HCB6 807 aa28.97■■■□□ 2.23
TSPAN4-202ENST00000397396 KIF13BQ9NQT8 1826 aa28.97■■■□□ 2.23
TSPAN4-202ENST00000397396 IFIT2P09913 472 aaKnown RBP28.96■■■□□ 2.23
TSPAN4-202ENST00000397396 COL11A2P13942 1736 aaPredicted RBP28.95■■■□□ 2.23
TSPAN4-202ENST00000397396 TNNI3KQ59H18 835 aa28.95■■■□□ 2.23
TSPAN4-202ENST00000397396 PELP1Q8IZL8 1130 aaKnown RBP28.95■■■□□ 2.23
TSPAN4-202ENST00000397396 GPATCH3Q96I76 525 aa28.95■■■□□ 2.23
TSPAN4-202ENST00000397396 SPEF2Q9C093 1822 aa28.95■■■□□ 2.23
TSPAN4-202ENST00000397396 ANKRD2Q9GZV1 360 aa28.95■■■□□ 2.23
TSPAN4-202ENST00000397396 FPGT-TNNI3KV9GXZ4 949 aa28.95■■■□□ 2.23
TSPAN4-202ENST00000397396 AACSQ86V21 672 aa28.94■■■□□ 2.22
TSPAN4-202ENST00000397396 CNKSR1Q969H4 720 aa28.94■■■□□ 2.22
TSPAN4-202ENST00000397396 ZNF609O15014 1411 aa28.94■■■□□ 2.22
TSPAN4-202ENST00000397396 PDE8BO95263 885 aa28.94■■■□□ 2.22
TSPAN4-202ENST00000397396 RGS3P49796 1198 aa28.94■■■□□ 2.22
TSPAN4-202ENST00000397396 TGFB2P61812 414 aa28.94■■■□□ 2.22
TSPAN4-202ENST00000397396 PDE4AP27815 886 aa28.93■■■□□ 2.22
TSPAN4-202ENST00000397396 CHRNDQ07001 517 aa28.93■■■□□ 2.22
TSPAN4-202ENST00000397396 PUM3Q15397 648 aaKnown RBP28.93■■■□□ 2.22
TSPAN4-202ENST00000397396 VGLL2Q8N8G2 317 aa28.93■■■□□ 2.22
TSPAN4-202ENST00000397396 TMX4Q9H1E5 349 aaPredicted RBP28.93■■■□□ 2.22
TSPAN4-202ENST00000397396 AOX1Q06278 1338 aa28.92■■■□□ 2.22
TSPAN4-202ENST00000397396 PPEF1O14829 653 aaPredicted RBP28.92■■■□□ 2.22
TSPAN4-202ENST00000397396 MX1P20591 662 aa28.92■■■□□ 2.22
TSPAN4-202ENST00000397396 PTGER2P43116 358 aa28.92■■■□□ 2.22
TSPAN4-202ENST00000397396 MINPP1Q9UNW1 487 aa28.92■■■□□ 2.22
TSPAN4-202ENST00000397396 CD2APQ9Y5K6 639 aa28.92■■■□□ 2.22
TSPAN4-202ENST00000397396 ATP2B3Q16720 1220 aa28.91■■■□□ 2.22
TSPAN4-202ENST00000397396 ZNF622Q969S3 477 aaKnown RBP eCLIP28.91■■■□□ 2.22
TSPAN4-202ENST00000397396 EAF2Q96CJ1 260 aaPredicted RBP28.91■■■□□ 2.22
TSPAN4-202ENST00000397396 BCL11AQ9H165 835 aa28.91■■■□□ 2.22
TSPAN4-202ENST00000397396 DLEC1Q9Y238 1755 aa28.91■■■□□ 2.22
TSPAN4-202ENST00000397396 COL4A1P02462 1669 aa28.9■■■□□ 2.22
TSPAN4-202ENST00000397396 TTC41PQ6P2S7 1318 aa28.9■■■□□ 2.22
TSPAN4-202ENST00000397396 LPIN2Q92539 896 aa28.9■■■□□ 2.22
TSPAN4-202ENST00000397396 OSBPL3Q9H4L5 887 aa28.9■■■□□ 2.22
TSPAN4-202ENST00000397396 SALL3Q9BXA9 1300 aa28.89■■■□□ 2.22
TSPAN4-202ENST00000397396 A0A1B0GUL7 405 aa28.89■■■□□ 2.21
TSPAN4-202ENST00000397396 PLEKHM2Q8IWE5 1019 aa28.89■■■□□ 2.21
TSPAN4-202ENST00000397396 STAP2Q9UGK3 403 aa28.89■■■□□ 2.21
TSPAN4-202ENST00000397396 TAF1P21675 1872 aa28.88■■■□□ 2.21
TSPAN4-202ENST00000397396 SLC5A1P13866 664 aa28.88■■■□□ 2.21
TSPAN4-202ENST00000397396 SP8Q8IXZ3 490 aa28.88■■■□□ 2.21
TSPAN4-202ENST00000397396 C16orf71Q8IYS4 520 aaPredicted RBP28.88■■■□□ 2.21
TSPAN4-202ENST00000397396 XDHP47989 1333 aa28.87■■■□□ 2.21
TSPAN4-202ENST00000397396 LRRC37AA6NMS7 1700 aa28.87■■■□□ 2.21
TSPAN4-202ENST00000397396 ERC2O15083 957 aa28.87■■■□□ 2.21
TSPAN4-202ENST00000397396 IFIT1P09914 478 aaKnown RBP28.87■■■□□ 2.21
TSPAN4-202ENST00000397396 PDE1AP54750 535 aa28.87■■■□□ 2.21
TSPAN4-202ENST00000397396 UBE4AQ14139 1066 aa28.87■■■□□ 2.21
TSPAN4-202ENST00000397396 ATP6V0A2Q9Y487 856 aa28.87■■■□□ 2.21
TSPAN4-202ENST00000397396 CHRNA5P30532 468 aa28.86■■■□□ 2.21
TSPAN4-202ENST00000397396 NEUROD6Q96NK8 337 aa28.86■■■□□ 2.21
TSPAN4-202ENST00000397396 ECHDC1Q9NTX5 307 aa28.86■■■□□ 2.21
TSPAN4-202ENST00000397396 A0A1B0GUL6 1792 aa28.86■■■□□ 2.21
TSPAN4-202ENST00000397396 FGFR2P21802 821 aa28.85■■■□□ 2.21
TSPAN4-202ENST00000397396 KCNJ4P48050 445 aa28.85■■■□□ 2.21
TSPAN4-202ENST00000397396 CCDC8Q9H0W5 538 aaPredicted RBP28.85■■■□□ 2.21
TSPAN4-202ENST00000397396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.85■■■□□ 2.21
TSPAN4-202ENST00000397396 CC2D2BQ6DHV5 1058 aa28.84■■■□□ 2.21
TSPAN4-202ENST00000397396 PRPF40BQ6NWY9 871 aaKnown RBP28.84■■■□□ 2.21
TSPAN4-202ENST00000397396 HELBQ8NG08 1087 aaPredicted RBP28.84■■■□□ 2.21
TSPAN4-202ENST00000397396 OTUD7AQ8TE49 926 aaPredicted RBP28.84■■■□□ 2.21
TSPAN4-202ENST00000397396 ANKIB1Q9P2G1 1089 aa28.84■■■□□ 2.21
TSPAN4-202ENST00000397396 DBNLQ9UJU6 430 aaKnown RBP28.84■■■□□ 2.21
TSPAN4-202ENST00000397396 LEMD3Q9Y2U8 911 aa28.84■■■□□ 2.21
TSPAN4-202ENST00000397396 GRIPAP1Q4V328 841 aa28.83■■■□□ 2.21
TSPAN4-202ENST00000397396 GORABQ5T7V8 394 aa28.83■■■□□ 2.21
TSPAN4-202ENST00000397396 SKAP1Q86WV1 359 aa28.83■■■□□ 2.21
TSPAN4-202ENST00000397396 TTLL6Q8N841 843 aa28.83■■■□□ 2.21
TSPAN4-202ENST00000397396 PODXL2Q9NZ53 605 aa28.83■■■□□ 2.21
TSPAN4-202ENST00000397396 ARAP2Q8WZ64 1704 aa28.83■■■□□ 2.21
TSPAN4-202ENST00000397396 TAF5LO75529 589 aa28.82■■■□□ 2.2
TSPAN4-202ENST00000397396 GLRX3O76003 335 aaKnown RBP28.82■■■□□ 2.2
TSPAN4-202ENST00000397396 DPEP1P16444 411 aa28.82■■■□□ 2.2
TSPAN4-202ENST00000397396 ATP2B4P23634 1241 aa28.82■■■□□ 2.2
TSPAN4-202ENST00000397396 CCDC158Q5M9N0 1113 aa28.82■■■□□ 2.2
TSPAN4-202ENST00000397396 DBNDD2Q9BQY9 259 aa28.82■■■□□ 2.2
TSPAN4-202ENST00000397396 TIMM10P62072 90 aa28.81■■■□□ 2.2
TSPAN4-202ENST00000397396 XAGE2Q96GT9 111 aa28.81■■■□□ 2.2
TSPAN4-202ENST00000397396 PPP1R1BQ9UD71 204 aaPredicted RBP28.81■■■□□ 2.2
TSPAN4-202ENST00000397396 TLR7Q9NYK1 1049 aaKnown RBP28.8■■■□□ 2.2
TSPAN4-202ENST00000397396 PIM2Q9P1W9 311 aa28.8■■■□□ 2.2
TSPAN4-202ENST00000397396 KIAA1551Q9HCM1 1747 aa28.8■■■□□ 2.2
TSPAN4-202ENST00000397396 BMP2KLQ5H9B9 411 aa28.79■■■□□ 2.2
TSPAN4-202ENST00000397396 TTC22Q5TAA0 569 aa28.79■■■□□ 2.2
TSPAN4-202ENST00000397396 SOGA3Q5TF21 947 aa28.79■■■□□ 2.2
TSPAN4-202ENST00000397396 GGA1Q9UJY5 639 aa28.79■■■□□ 2.2
TSPAN4-202ENST00000397396 ZNF804BA4D1E1 1349 aa28.79■■■□□ 2.2
TSPAN4-202ENST00000397396 A0A0G2JLW4 131 aa28.78■■■□□ 2.2
TSPAN4-202ENST00000397396 KLHL34Q8N239 644 aa28.78■■■□□ 2.2
TSPAN4-202ENST00000397396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.78■■■□□ 2.2
TSPAN4-202ENST00000397396 NSFL1CQ9UNZ2 370 aaKnown RBP28.78■■■□□ 2.2
TSPAN4-202ENST00000397396 ATP5JP18859 108 aa28.77■■■□□ 2.2
TSPAN4-202ENST00000397396 GPSM2P81274 684 aa28.77■■■□□ 2.2
TSPAN4-202ENST00000397396 CAVIN4Q5BKX8 364 aa28.77■■■□□ 2.2
TSPAN4-202ENST00000397396 UQCRFS1P1P0C7P4 283 aa28.76■■■□□ 2.19
TSPAN4-202ENST00000397396 KCNA3P22001 575 aa28.76■■■□□ 2.19
TSPAN4-202ENST00000397396 TTC39AQ5SRH9 613 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms