RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 CCZ1BP86790 482 aa23.21■■□□□ 1.31
AGAP3-202ENST00000397238 CCZ1P86791 482 aaPredicted RBP23.21■■□□□ 1.31
AGAP3-202ENST00000397238 APOBRQ0VD83 1088 aa23.21■■□□□ 1.31
AGAP3-202ENST00000397238 LRRN4CLQ8ND94 238 aa23.21■■□□□ 1.31
AGAP3-202ENST00000397238 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
AGAP3-202ENST00000397238 MYL6BP14649 208 aa23.21■■□□□ 1.31
AGAP3-202ENST00000397238 KSR2Q6VAB6 950 aa23.21■■□□□ 1.31
AGAP3-202ENST00000397238 PXDNLA1KZ92 1463 aa23.2■■□□□ 1.31
AGAP3-202ENST00000397238 A0A1B0GVL5 298 aa23.2■■□□□ 1.3
AGAP3-202ENST00000397238 SLU7O95391 586 aaKnown RBP23.2■■□□□ 1.3
AGAP3-202ENST00000397238 DDX46Q7L014 1031 aaKnown RBP23.2■■□□□ 1.3
AGAP3-202ENST00000397238 MRFAP1L1Q96HT8 127 aa23.2■■□□□ 1.3
AGAP3-202ENST00000397238 RGPD1P0DJD0 1748 aa23.2■■□□□ 1.3
AGAP3-202ENST00000397238 DHX40Q8IX18 779 aaKnown RBP23.2■■□□□ 1.3
AGAP3-202ENST00000397238 KAZALD1Q96I82 304 aa23.2■■□□□ 1.3
AGAP3-202ENST00000397238 RBM6P78332 1123 aaKnown RBP23.2■■□□□ 1.3
AGAP3-202ENST00000397238 SNW1Q13573 536 aaKnown RBP23.2■■□□□ 1.3
AGAP3-202ENST00000397238 TMC6Q7Z403 805 aa23.2■■□□□ 1.3
AGAP3-202ENST00000397238 PDIA4P13667 645 aaKnown RBP23.19■■□□□ 1.3
AGAP3-202ENST00000397238 MTX1Q13505 466 aa23.19■■□□□ 1.3
AGAP3-202ENST00000397238 NYAP1Q6ZVC0 841 aa23.19■■□□□ 1.3
AGAP3-202ENST00000397238 RIC3Q7Z5B4 369 aa23.19■■□□□ 1.3
AGAP3-202ENST00000397238 HOMER1Q86YM7 354 aa23.19■■□□□ 1.3
AGAP3-202ENST00000397238 NPHP4O75161 1426 aaPredicted RBP23.19■■□□□ 1.3
AGAP3-202ENST00000397238 OTUD7BQ6GQQ9 843 aa23.19■■□□□ 1.3
AGAP3-202ENST00000397238 CEP57L1Q8IYX8 460 aa23.19■■□□□ 1.3
AGAP3-202ENST00000397238 ANO10Q9NW15 660 aa23.19■■□□□ 1.3
AGAP3-202ENST00000397238 CYP21A2P08686 494 aa23.18■■□□□ 1.3
AGAP3-202ENST00000397238 PIP4K2AP48426 406 aaPredicted RBP23.18■■□□□ 1.3
AGAP3-202ENST00000397238 ERO1AQ96HE7 468 aa23.18■■□□□ 1.3
AGAP3-202ENST00000397238 PTPN21Q16825 1174 aa23.18■■□□□ 1.3
AGAP3-202ENST00000397238 KLHL34Q8N239 644 aa23.18■■□□□ 1.3
AGAP3-202ENST00000397238 ZSCAN16Q9H4T2 348 aaPredicted RBP23.18■■□□□ 1.3
AGAP3-202ENST00000397238 CDC25BP30305 580 aa23.18■■□□□ 1.3
AGAP3-202ENST00000397238 VGLL3A8MV65 326 aa23.17■■□□□ 1.3
AGAP3-202ENST00000397238 SF3A1Q15459 793 aaKnown RBP23.17■■□□□ 1.3
AGAP3-202ENST00000397238 BABAM1Q9NWV8 329 aa23.17■■□□□ 1.3
AGAP3-202ENST00000397238 PTPDC1A2A3K4 754 aa23.17■■□□□ 1.3
AGAP3-202ENST00000397238 NEMFO60524 1076 aa23.17■■□□□ 1.3
AGAP3-202ENST00000397238 IFNKQ9P0W0 207 aa23.17■■□□□ 1.3
AGAP3-202ENST00000397238 HMG20BQ9P0W2 317 aa23.17■■□□□ 1.3
AGAP3-202ENST00000397238 FAM177A1Q8N128 213 aaPredicted RBP23.16■■□□□ 1.3
AGAP3-202ENST00000397238 ZBTB9Q96C00 473 aa23.16■■□□□ 1.3
AGAP3-202ENST00000397238 SARM1Q6SZW1 724 aa23.16■■□□□ 1.3
AGAP3-202ENST00000397238 RAB11FIP4Q86YS3 637 aa23.16■■□□□ 1.3
AGAP3-202ENST00000397238 ALDH1L1O75891 902 aa23.16■■□□□ 1.3
AGAP3-202ENST00000397238 POLR3DP05423 398 aaPredicted RBP23.16■■□□□ 1.3
AGAP3-202ENST00000397238 ORAI2Q96SN7 254 aa23.16■■□□□ 1.3
AGAP3-202ENST00000397238 CAVIN2O95810 425 aa23.15■■□□□ 1.3
AGAP3-202ENST00000397238 KRT32Q14532 448 aa23.15■■□□□ 1.3
AGAP3-202ENST00000397238 A0A0G2JLW4 131 aa23.15■■□□□ 1.3
AGAP3-202ENST00000397238 XPO4Q9C0E2 1151 aaKnown RBP23.15■■□□□ 1.3
AGAP3-202ENST00000397238 ADD1P35611 737 aaKnown RBP23.14■■□□□ 1.3
AGAP3-202ENST00000397238 EPHA10Q5JZY3 1008 aa23.14■■□□□ 1.3
AGAP3-202ENST00000397238 ZNF446Q9NWS9 450 aa23.14■■□□□ 1.3
AGAP3-202ENST00000397238 CTAGE5O15320 804 aa23.14■■□□□ 1.29
AGAP3-202ENST00000397238 COL15A1P39059 1388 aa23.14■■□□□ 1.29
AGAP3-202ENST00000397238 RGPD8O14715 1765 aaPredicted RBP23.14■■□□□ 1.29
AGAP3-202ENST00000397238 CDK11BP21127 795 aaKnown RBP23.14■■□□□ 1.29
AGAP3-202ENST00000397238 DPCR1Q3MIW9 517 aa23.14■■□□□ 1.29
AGAP3-202ENST00000397238 TMX1Q9H3N1 280 aa23.14■■□□□ 1.29
AGAP3-202ENST00000397238 POLR3GO15318 223 aaPredicted RBP23.13■■□□□ 1.29
AGAP3-202ENST00000397238 FAM160A1Q05DH4 1040 aa23.13■■□□□ 1.29
AGAP3-202ENST00000397238 TFCP2Q12800 502 aa23.13■■□□□ 1.29
AGAP3-202ENST00000397238 NSUN7Q8NE18 718 aaKnown RBP23.13■■□□□ 1.29
AGAP3-202ENST00000397238 LINS1Q8NG48 757 aa23.13■■□□□ 1.29
AGAP3-202ENST00000397238 DBNLQ9UJU6 430 aaKnown RBP23.13■■□□□ 1.29
AGAP3-202ENST00000397238 RCOR1Q9UKL0 485 aa23.13■■□□□ 1.29
AGAP3-202ENST00000397238 DIP2AQ14689 1571 aa23.13■■□□□ 1.29
AGAP3-202ENST00000397238 E4F1Q66K89 784 aaPredicted RBP23.13■■□□□ 1.29
AGAP3-202ENST00000397238 STOX1Q6ZVD7 989 aa23.13■■□□□ 1.29
AGAP3-202ENST00000397238 MED23Q9ULK4 1368 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 GIGYF1O75420 1035 aaPredicted RBP23.12■■□□□ 1.29
AGAP3-202ENST00000397238 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 NAT10Q9H0A0 1025 aaKnown RBP23.12■■□□□ 1.29
AGAP3-202ENST00000397238 ARHGAP29Q52LW3 1261 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 SFPQP23246 707 aaKnown RBP eCLIP23.12■■□□□ 1.294e-6■■■■□ 20.8
AGAP3-202ENST00000397238 LMOD1P29536 600 aaPredicted RBP23.12■■□□□ 1.29
AGAP3-202ENST00000397238 SLC39A6Q13433 755 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 NBPF11Q86T75 865 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 NEUROD6Q96NK8 337 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 MYD88Q99836 296 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 DBNDD2Q9BQY9 259 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 DNAI1Q9UI46 699 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 HDAC5Q9UQL6 1122 aa23.12■■□□□ 1.29
AGAP3-202ENST00000397238 CTDNEP1O95476 244 aa23.11■■□□□ 1.29
AGAP3-202ENST00000397238 PPP1R13BQ96KQ4 1090 aa23.11■■□□□ 1.29
AGAP3-202ENST00000397238 NOL10Q9BSC4 688 aaKnown RBP23.11■■□□□ 1.29
AGAP3-202ENST00000397238 PCDHA7Q9UN72 937 aa23.11■■□□□ 1.29
AGAP3-202ENST00000397238 GOLGA8FQ08AF8 430 aa23.11■■□□□ 1.29
AGAP3-202ENST00000397238 GOLGA8DPQ0D2H9 430 aa23.11■■□□□ 1.29
AGAP3-202ENST00000397238 TAF3Q5VWG9 929 aa23.11■■□□□ 1.29
AGAP3-202ENST00000397238 ZNF396Q96N95 335 aaPredicted RBP23.11■■□□□ 1.29
AGAP3-202ENST00000397238 CCDC66A2RUB6 948 aa23.1■■□□□ 1.29
AGAP3-202ENST00000397238 NDUFA8P51970 172 aa23.1■■□□□ 1.29
AGAP3-202ENST00000397238 GJB4Q9NTQ9 266 aa23.1■■□□□ 1.29
AGAP3-202ENST00000397238 DDX58O95786 925 aaKnown RBP23.1■■□□□ 1.29
AGAP3-202ENST00000397238 STK38Q15208 465 aa23.1■■□□□ 1.29
AGAP3-202ENST00000397238 ARMCX5Q6P1M9 558 aa23.1■■□□□ 1.29
AGAP3-202ENST00000397238 EPC1Q9H2F5 836 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms