RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 TJP1Q07157 1748 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 NFIXQ14938 502 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 LRSAM1Q6UWE0 723 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 SLC51AQ86UW1 340 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
TUBB-208ENST00000396389 NARFQ9UHQ1 456 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 EXOC6BQ9Y2D4 811 aa12.38□□□□□ -0.43
TUBB-208ENST00000396389 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
TUBB-208ENST00000396389 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
TUBB-208ENST00000396389 GNAI2P04899 355 aa12.37□□□□□ -0.43
TUBB-208ENST00000396389 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
TUBB-208ENST00000396389 ATP2B3Q16720 1220 aa12.37□□□□□ -0.43
TUBB-208ENST00000396389 ERFEQ4G0M1 354 aa12.37□□□□□ -0.43
TUBB-208ENST00000396389 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
TUBB-208ENST00000396389 ZNF594Q96JF6 807 aaPredicted RBP12.37□□□□□ -0.43
TUBB-208ENST00000396389 TTC12Q9H892 705 aaPredicted RBP12.37□□□□□ -0.43
TUBB-208ENST00000396389 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
TUBB-208ENST00000396389 KAZALD1Q96I82 304 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 CCDC94Q9BW85 323 aaPredicted RBP12.36□□□□□ -0.43
TUBB-208ENST00000396389 USP26Q9BXU7 913 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 CCDC39Q9UFE4 941 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 CSPP1Q1MSJ5 1256 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 C3orf67Q6ZVT6 689 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 PLEKHM2Q8IWE5 1019 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
TUBB-208ENST00000396389 DTNBO60941 627 aa12.35□□□□□ -0.43
TUBB-208ENST00000396389 MMP10P09238 476 aa12.35□□□□□ -0.43
TUBB-208ENST00000396389 IRS4O14654 1257 aaPredicted RBP12.35□□□□□ -0.43
TUBB-208ENST00000396389 RABEP1Q15276 862 aa12.35□□□□□ -0.43
TUBB-208ENST00000396389 GNAI3P08754 354 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 CEP85Q6P2H3 762 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 DMTNQ08495 405 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 CCDC191Q8NCU4 936 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 UTP14AQ9BVJ6 771 aaKnown RBP12.34□□□□□ -0.43
TUBB-208ENST00000396389 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 GADD45BO75293 160 aaPredicted RBP12.34□□□□□ -0.43
TUBB-208ENST00000396389 DDR1Q08345 913 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 ZNF34Q8IZ26 560 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 GCC1Q96CN9 775 aa12.34□□□□□ -0.43
TUBB-208ENST00000396389 ERVV-1B6SEH8 477 aa12.33□□□□□ -0.44
TUBB-208ENST00000396389 ALDH1L1O75891 902 aa12.33□□□□□ -0.44
TUBB-208ENST00000396389 KIAA2012Q0VF49 1180 aa12.33□□□□□ -0.44
TUBB-208ENST00000396389 OS9Q13438 667 aaPredicted RBP12.33□□□□□ -0.44
TUBB-208ENST00000396389 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
TUBB-208ENST00000396389 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
TUBB-208ENST00000396389 SEC31BQ9NQW1 1179 aa12.33□□□□□ -0.44
TUBB-208ENST00000396389 USP25Q9UHP3 1055 aa12.33□□□□□ -0.44
TUBB-208ENST00000396389 SURF6O75683 361 aaKnown RBP12.32□□□□□ -0.44
TUBB-208ENST00000396389 MYRIPQ8NFW9 859 aa12.32□□□□□ -0.44
TUBB-208ENST00000396389 SERPINB2P05120 415 aa12.32□□□□□ -0.44
TUBB-208ENST00000396389 HSP90AB3PQ58FF7 597 aa12.32□□□□□ -0.44
TUBB-208ENST00000396389 TSHZ3Q63HK5 1081 aa12.32□□□□□ -0.44
TUBB-208ENST00000396389 CNBD1Q8NA66 436 aa12.32□□□□□ -0.44
TUBB-208ENST00000396389 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
TUBB-208ENST00000396389 GREM2Q9H772 168 aa12.32□□□□□ -0.44
TUBB-208ENST00000396389 SH3TC1Q8TE82 1336 aa12.32□□□□□ -0.44
TUBB-208ENST00000396389 SDSP20132 328 aa12.31□□□□□ -0.44
TUBB-208ENST00000396389 SNAP23O00161 211 aa12.31□□□□□ -0.44
TUBB-208ENST00000396389 NTSR2O95665 410 aa12.31□□□□□ -0.44
TUBB-208ENST00000396389 LAMB4A4D0S4 1761 aa12.31□□□□□ -0.44
TUBB-208ENST00000396389 H7C1W4 665 aa12.31□□□□□ -0.44
TUBB-208ENST00000396389 NEK4P51957 841 aa12.31□□□□□ -0.44
TUBB-208ENST00000396389 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.441e-25■□□□□ 10.3
TUBB-208ENST00000396389 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.31□□□□□ -0.44
TUBB-208ENST00000396389 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
TUBB-208ENST00000396389 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
TUBB-208ENST00000396389 MTERF4Q7Z6M4 381 aaKnown RBP12.3□□□□□ -0.44
TUBB-208ENST00000396389 ANKRD44Q8N8A2 993 aa12.3□□□□□ -0.44
TUBB-208ENST00000396389 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
TUBB-208ENST00000396389 PUS3Q9BZE2 481 aaKnown RBP12.3□□□□□ -0.44
TUBB-208ENST00000396389 TSPY26PQ9H489 355 aa12.3□□□□□ -0.44
TUBB-208ENST00000396389 TNS1Q9HBL0 1735 aaKnown RBP12.3□□□□□ -0.44
TUBB-208ENST00000396389 CASP7P55210 303 aa12.3□□□□□ -0.44
TUBB-208ENST00000396389 TPTE2Q6XPS3 522 aa12.3□□□□□ -0.44
TUBB-208ENST00000396389 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
TUBB-208ENST00000396389 LY75O60449 1722 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 ST18O60284 1047 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 MCM5P33992 734 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 FOXO4P98177 505 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 WTIPA6NIX2 430 aaPredicted RBP12.29□□□□□ -0.44
TUBB-208ENST00000396389 ADRA2BP18089 450 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 CCDC125Q86Z20 511 aa12.29□□□□□ -0.44
TUBB-208ENST00000396389 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
TUBB-208ENST00000396389 ITGA6P23229 1130 aa12.28□□□□□ -0.44
TUBB-208ENST00000396389 U2AF2P26368 475 aaKnown RBP eCLIP12.28□□□□□ -0.44
TUBB-208ENST00000396389 OLFM4Q6UX06 510 aa12.28□□□□□ -0.44
TUBB-208ENST00000396389 TMX3Q96JJ7 454 aa12.28□□□□□ -0.44
TUBB-208ENST00000396389 POLRMTO00411 1230 aaKnown RBP12.28□□□□□ -0.44
TUBB-208ENST00000396389 CCDC57Q2TAC2 916 aa12.28□□□□□ -0.44
TUBB-208ENST00000396389 LRRC24Q50LG9 513 aa12.28□□□□□ -0.44
TUBB-208ENST00000396389 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
TUBB-208ENST00000396389 PARP3Q9Y6F1 533 aa12.28□□□□□ -0.44
TUBB-208ENST00000396389 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms