RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 DSCC1Q9BVC3 393 aa20.01■□□□□ 0.79
NUP50-202ENST00000396096 NUP98P52948 1817 aa20.01■□□□□ 0.79
NUP50-202ENST00000396096 EXOC5O00471 708 aa20.01■□□□□ 0.79
NUP50-202ENST00000396096 IFIT1P09914 478 aaKnown RBP20.01■□□□□ 0.79
NUP50-202ENST00000396096 PRIM1P49642 420 aaKnown RBP20.01■□□□□ 0.79
NUP50-202ENST00000396096 NEK1Q96PY6 1258 aa20.01■□□□□ 0.79
NUP50-202ENST00000396096 LAMA4Q16363 1823 aa20.01■□□□□ 0.79
NUP50-202ENST00000396096 DOT1LQ8TEK3 1739 aa20■□□□□ 0.79
NUP50-202ENST00000396096 ABCC12Q96J65 1359 aa20■□□□□ 0.79
NUP50-202ENST00000396096 CHGBP05060 677 aa20■□□□□ 0.79
NUP50-202ENST00000396096 NLRP10Q86W26 655 aa20■□□□□ 0.79
NUP50-202ENST00000396096 NECAB1Q8N987 351 aa20■□□□□ 0.79
NUP50-202ENST00000396096 ZNF330Q9Y3S2 320 aaPredicted RBP20■□□□□ 0.79
NUP50-202ENST00000396096 NRAPQ86VF7 1730 aa19.99■□□□□ 0.79
NUP50-202ENST00000396096 CYP21A2P08686 494 aa19.99■□□□□ 0.79
NUP50-202ENST00000396096 FAM89AQ96GI7 184 aa19.99■□□□□ 0.79
NUP50-202ENST00000396096 RBSNQ9H1K0 784 aa19.99■□□□□ 0.79
NUP50-202ENST00000396096 RRAGDQ9NQL2 400 aaPredicted RBP19.99■□□□□ 0.79
NUP50-202ENST00000396096 RNF113AO15541 343 aaKnown RBP19.99■□□□□ 0.79
NUP50-202ENST00000396096 GADD45BO75293 160 aaPredicted RBP19.99■□□□□ 0.79
NUP50-202ENST00000396096 PDCP20941 246 aa19.99■□□□□ 0.79
NUP50-202ENST00000396096 CDCA7Q9BWT1 371 aaPredicted RBP19.99■□□□□ 0.79
NUP50-202ENST00000396096 CNPY2Q9Y2B0 182 aa19.99■□□□□ 0.79
NUP50-202ENST00000396096 SYCE3A1L190 88 aa19.98■□□□□ 0.79
NUP50-202ENST00000396096 ERVV-1B6SEH8 477 aa19.98■□□□□ 0.79
NUP50-202ENST00000396096 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
NUP50-202ENST00000396096 HLFQ16534 295 aa19.98■□□□□ 0.79
NUP50-202ENST00000396096 GDPD2Q9HCC8 539 aa19.98■□□□□ 0.79
NUP50-202ENST00000396096 RIC1Q4ADV7 1423 aa19.97■□□□□ 0.79
NUP50-202ENST00000396096 HMGB1P09429 215 aaKnown RBP19.97■□□□□ 0.79
NUP50-202ENST00000396096 CSPP1Q1MSJ5 1256 aa19.97■□□□□ 0.79
NUP50-202ENST00000396096 CCDC158Q5M9N0 1113 aa19.97■□□□□ 0.79
NUP50-202ENST00000396096 KLHL34Q8N239 644 aa19.97■□□□□ 0.79
NUP50-202ENST00000396096 ANP32BQ92688 251 aaKnown RBP19.97■□□□□ 0.79
NUP50-202ENST00000396096 CCDC9Q9Y3X0 531 aaKnown RBP19.97■□□□□ 0.79
NUP50-202ENST00000396096 CICQ96RK0 1608 aaPredicted RBP19.97■□□□□ 0.79
NUP50-202ENST00000396096 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
NUP50-202ENST00000396096 UBE2HP62256 183 aa19.96■□□□□ 0.79
NUP50-202ENST00000396096 LRRFIP1Q32MZ4 808 aaKnown RBP19.96■□□□□ 0.79
NUP50-202ENST00000396096 FOXD4L6Q3SYB3 417 aaPredicted RBP19.96■□□□□ 0.79
NUP50-202ENST00000396096 FOXD4L3Q6VB84 417 aaPredicted RBP19.96■□□□□ 0.79
NUP50-202ENST00000396096 TCEANC2Q96MN5 208 aa19.96■□□□□ 0.79
NUP50-202ENST00000396096 PHF14O94880 888 aa19.96■□□□□ 0.79
NUP50-202ENST00000396096 TTLL11Q8NHH1 800 aa19.96■□□□□ 0.79
NUP50-202ENST00000396096 XAGE2Q96GT9 111 aa19.96■□□□□ 0.79
NUP50-202ENST00000396096 ZBTB1Q9Y2K1 713 aa19.96■□□□□ 0.79
NUP50-202ENST00000396096 MAST3O60307 1309 aa19.96■□□□□ 0.79
NUP50-202ENST00000396096 RREB1Q92766 1687 aa19.95■□□□□ 0.78
NUP50-202ENST00000396096 MYH7P12883 1935 aa19.95■□□□□ 0.78
NUP50-202ENST00000396096 LARP1BQ659C4 914 aaKnown RBP19.95■□□□□ 0.78
NUP50-202ENST00000396096 RIPOR2Q9Y4F9 1068 aa19.95■□□□□ 0.78
NUP50-202ENST00000396096 ZFYP08048 801 aaPredicted RBP19.94■□□□□ 0.78
NUP50-202ENST00000396096 CTSWP56202 376 aa19.94■□□□□ 0.78
NUP50-202ENST00000396096 TAF7LQ5H9L4 462 aa19.94■□□□□ 0.78
NUP50-202ENST00000396096 TTC39AQ5SRH9 613 aa19.94■□□□□ 0.78
NUP50-202ENST00000396096 STOX1Q6ZVD7 989 aa19.94■□□□□ 0.78
NUP50-202ENST00000396096 GTF3C6Q969F1 213 aa19.94■□□□□ 0.78
NUP50-202ENST00000396096 THRAP3Q9Y2W1 955 aaKnown RBP19.94■□□□□ 0.78
NUP50-202ENST00000396096 LRP5O75197 1615 aa19.94■□□□□ 0.78
NUP50-202ENST00000396096 HSPD1P10809 573 aaKnown RBP19.94■□□□□ 0.78
NUP50-202ENST00000396096 ADORA1P30542 326 aa19.94■□□□□ 0.78
NUP50-202ENST00000396096 Q6ZUG5 572 aa19.93■□□□□ 0.78
NUP50-202ENST00000396096 TRIM44Q96DX7 344 aaPredicted RBP19.93■□□□□ 0.78
NUP50-202ENST00000396096 AKAP11Q9UKA4 1901 aa19.93■□□□□ 0.78
NUP50-202ENST00000396096 SPATA31A1Q5TZJ5 1347 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 VPS37CA5D8V6 355 aaPredicted RBP19.92■□□□□ 0.78
NUP50-202ENST00000396096 GPTP24298 496 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 GORABQ5T7V8 394 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 DHX32Q7L7V1 743 aaKnown RBP19.92■□□□□ 0.78
NUP50-202ENST00000396096 ZNF512BQ96KM6 892 aaPredicted RBP19.92■□□□□ 0.78
NUP50-202ENST00000396096 AGXT2Q9BYV1 514 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 KAT6BQ8WYB5 2073 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 ANKRD18BA2A2Z9 1011 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 ITGA6P23229 1130 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 EXOSC10Q01780 885 aaKnown RBP19.92■□□□□ 0.78
NUP50-202ENST00000396096 DNM1Q05193 864 aaKnown RBP19.92■□□□□ 0.78
NUP50-202ENST00000396096 SLFNL1Q499Z3 407 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 CCDC183Q5T5S1 534 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 ZNF34Q8IZ26 560 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 SYNE4Q8N205 404 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 PDLIM2Q96JY6 352 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 TSPY26PQ9H489 355 aa19.92■□□□□ 0.78
NUP50-202ENST00000396096 LTBP4Q8N2S1 1624 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 M0R2C6 588 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 IRS4O14654 1257 aaPredicted RBP19.91■□□□□ 0.78
NUP50-202ENST00000396096 PDE8AO60658 829 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 LETM1O95202 739 aaPredicted RBP19.91■□□□□ 0.78
NUP50-202ENST00000396096 CLCN1P35523 988 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 ATP2B3Q16720 1220 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 DZIP3Q86Y13 1208 aaKnown RBP19.91■□□□□ 0.78
NUP50-202ENST00000396096 AK7Q96M32 723 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 GREM2Q9H772 168 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 PHLPP1O60346 1717 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 ARAP2Q8WZ64 1704 aa19.91■□□□□ 0.78
NUP50-202ENST00000396096 FIBPO43427 364 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 VGLL2Q8N8G2 317 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 OSBP2Q969R2 916 aa19.9■□□□□ 0.78
NUP50-202ENST00000396096 CCDC85AQ96PX6 553 aaPredicted RBP19.9■□□□□ 0.78
NUP50-202ENST00000396096 LLPHQ9BRT6 129 aaKnown RBP19.9■□□□□ 0.78
NUP50-202ENST00000396096 NWD2Q9ULI1 1742 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms