RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 E9PSI1 815 aa17.47■□□□□ 0.39
CXCL12-205ENST00000395794 MAP1SQ66K74 1059 aaPredicted RBP17.47■□□□□ 0.39
CXCL12-205ENST00000395794 DBNDD1Q9H9R9 158 aa17.47■□□□□ 0.39
CXCL12-205ENST00000395794 LRRC37AA6NMS7 1700 aa17.47■□□□□ 0.39
CXCL12-205ENST00000395794 XDHP47989 1333 aa17.47■□□□□ 0.39
CXCL12-205ENST00000395794 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
CXCL12-205ENST00000395794 TAF1P21675 1872 aa17.46■□□□□ 0.39
CXCL12-205ENST00000395794 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
CXCL12-205ENST00000395794 ITGBL1O95965 494 aaPredicted RBP17.46■□□□□ 0.39
CXCL12-205ENST00000395794 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
CXCL12-205ENST00000395794 DOK7Q18PE1 504 aa17.46■□□□□ 0.39
CXCL12-205ENST00000395794 GREM2Q9H772 168 aa17.46■□□□□ 0.39
CXCL12-205ENST00000395794 PASKQ96RG2 1323 aa17.46■□□□□ 0.38
CXCL12-205ENST00000395794 RTL9Q8NET4 1388 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 YDJCA8MPS7 323 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 F6X3S4 739 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 H7C1D1 291 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 ECE2O60344 883 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 ATP2B4P23634 1241 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 PLA2G12BQ9BX93 195 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 BSDC1Q9NW68 430 aaPredicted RBP17.45■□□□□ 0.38
CXCL12-205ENST00000395794 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
CXCL12-205ENST00000395794 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
CXCL12-205ENST00000395794 JMYQ8N9B5 988 aa17.44■□□□□ 0.38
CXCL12-205ENST00000395794 GPR101Q96P66 508 aaPredicted RBP17.44■□□□□ 0.38
CXCL12-205ENST00000395794 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
CXCL12-205ENST00000395794 CNOT7Q9UIV1 285 aaKnown RBP17.44■□□□□ 0.38
CXCL12-205ENST00000395794 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
CXCL12-205ENST00000395794 C9orf78Q9NZ63 289 aaPredicted RBP17.43■□□□□ 0.38
CXCL12-205ENST00000395794 PSMD14O00487 310 aa17.42■□□□□ 0.38
CXCL12-205ENST00000395794 ITGA6P23229 1130 aa17.42■□□□□ 0.38
CXCL12-205ENST00000395794 RPS12P25398 132 aaKnown RBP17.42■□□□□ 0.38
CXCL12-205ENST00000395794 DPF2Q92785 391 aa17.42■□□□□ 0.38
CXCL12-205ENST00000395794 MKRN1Q9UHC7 482 aaKnown RBP17.42■□□□□ 0.38
CXCL12-205ENST00000395794 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
CXCL12-205ENST00000395794 CHMP3Q9Y3E7 222 aa17.42■□□□□ 0.38
CXCL12-205ENST00000395794 COL4A1P02462 1669 aa17.42■□□□□ 0.38
CXCL12-205ENST00000395794 CACNA1FO60840 1977 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 ANKRD18BA2A2Z9 1011 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 ALDH1L1O75891 902 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 CSF1RP07333 972 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 CASP7P55210 303 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 SLFN5Q08AF3 891 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 FAM161AQ3B820 660 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 MICALL2Q8IY33 904 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 SRCIN1Q9C0H9 1055 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 ANKRD2Q9GZV1 360 aa17.41■□□□□ 0.38
CXCL12-205ENST00000395794 ZBTB12Q9Y330 459 aaPredicted RBP17.41■□□□□ 0.38
CXCL12-205ENST00000395794 GRM8O00222 908 aa17.4■□□□□ 0.38
CXCL12-205ENST00000395794 IFIT5Q13325 482 aaKnown RBP17.4■□□□□ 0.38
CXCL12-205ENST00000395794 ZC3H15Q8WU90 426 aaKnown RBP17.4■□□□□ 0.38
CXCL12-205ENST00000395794 LTBP1Q14766 1721 aa17.4■□□□□ 0.38
CXCL12-205ENST00000395794 ADAMTSL1Q8N6G6 1762 aa17.4■□□□□ 0.38
CXCL12-205ENST00000395794 KCNJ4P48050 445 aa17.39■□□□□ 0.37
CXCL12-205ENST00000395794 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
CXCL12-205ENST00000395794 PODNQ7Z5L7 613 aa17.39■□□□□ 0.37
CXCL12-205ENST00000395794 KCNQ5Q9NR82 932 aa17.39■□□□□ 0.37
CXCL12-205ENST00000395794 ABT1Q9ULW3 272 aaKnown RBP17.39■□□□□ 0.37
CXCL12-205ENST00000395794 LEMD3Q9Y2U8 911 aa17.39■□□□□ 0.37
CXCL12-205ENST00000395794 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
CXCL12-205ENST00000395794 TAF7LQ5H9L4 462 aa17.38■□□□□ 0.37
CXCL12-205ENST00000395794 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
CXCL12-205ENST00000395794 PTPRCP08575 1304 aa17.38■□□□□ 0.37
CXCL12-205ENST00000395794 VIL1P09327 827 aaKnown RBP17.37■□□□□ 0.37
CXCL12-205ENST00000395794 FOXO4P98177 505 aa17.37■□□□□ 0.37
CXCL12-205ENST00000395794 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
CXCL12-205ENST00000395794 CNTNAP1P78357 1384 aa17.37■□□□□ 0.37
CXCL12-205ENST00000395794 MED23Q9ULK4 1368 aa17.37■□□□□ 0.37
CXCL12-205ENST00000395794 USP17L3A6NCW0 530 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 USP17L4A6NCW7 530 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 DEFB115Q30KQ5 88 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 TBC1D10BQ4KMP7 808 aaPredicted RBP17.36■□□□□ 0.37
CXCL12-205ENST00000395794 RBM26Q5T8P6 1007 aaKnown RBP17.36■□□□□ 0.37
CXCL12-205ENST00000395794 CDC37L1Q7L3B6 337 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 SAMD7Q7Z3H4 446 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 TRPM4Q8TD43 1214 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 CDCA7LQ96GN5 454 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 PGAP2Q9UHJ9 254 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 ZNF804BA4D1E1 1349 aa17.36■□□□□ 0.37
CXCL12-205ENST00000395794 MYH3P11055 1940 aa17.35■□□□□ 0.37
CXCL12-205ENST00000395794 SHTN1A0MZ66 631 aa17.35■□□□□ 0.37
CXCL12-205ENST00000395794 TRAF5O00463 557 aa17.35■□□□□ 0.37
CXCL12-205ENST00000395794 HIRAP54198 1017 aaPredicted RBP17.35■□□□□ 0.37
CXCL12-205ENST00000395794 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
CXCL12-205ENST00000395794 RSBN1LQ6PCB5 846 aaPredicted RBP17.35■□□□□ 0.37
CXCL12-205ENST00000395794 AGBL3Q8NEM8 1001 aa17.35■□□□□ 0.37
CXCL12-205ENST00000395794 COA1Q9GZY4 146 aa17.35■□□□□ 0.37
CXCL12-205ENST00000395794 CT47B1P0C2W7 299 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-205ENST00000395794 CHRNDQ07001 517 aa17.34■□□□□ 0.37
CXCL12-205ENST00000395794 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
CXCL12-205ENST00000395794 DCPSQ96C86 337 aaKnown RBP17.34■□□□□ 0.37
CXCL12-205ENST00000395794 GLIS2Q9BZE0 524 aaPredicted RBP17.34■□□□□ 0.37
CXCL12-205ENST00000395794 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
CXCL12-205ENST00000395794 WTIPA6NIX2 430 aaPredicted RBP17.33■□□□□ 0.36
CXCL12-205ENST00000395794 RASSF10A6NK89 507 aa17.33■□□□□ 0.36
CXCL12-205ENST00000395794 USP17L8P0C7I0 530 aa17.33■□□□□ 0.36
CXCL12-205ENST00000395794 VEGFBP49765 207 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1134.5 ms