RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 LRRC24Q50LG9 513 aa12.4□□□□□ -0.42
ACTN1-203ENST00000394419 ISM2Q6H9L7 571 aa12.4□□□□□ -0.42
ACTN1-203ENST00000394419 ATP5JP18859 108 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 LRMPQ12912 555 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 TPD52L1Q16890 204 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-203ENST00000394419 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 CCAR1Q8IX12 1150 aaKnown RBP12.39□□□□□ -0.43
ACTN1-203ENST00000394419 PYCARDQ9ULZ3 195 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 PXDNQ92626 1479 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 PIBF1Q8WXW3 757 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 DCAF5Q96JK2 942 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 CBX8Q9HC52 389 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 PTPDC1A2A3K4 754 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 BIN1O00499 593 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
ACTN1-203ENST00000394419 STK38Q15208 465 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 TMEM87AQ8NBN3 555 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 DDX19AQ9NUU7 478 aaKnown RBP12.39□□□□□ -0.43
ACTN1-203ENST00000394419 CLIP2Q9UDT6 1046 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
ACTN1-203ENST00000394419 NPHP1O15259 732 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 CYP27B1O15528 508 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 DYNC1I1O14576 645 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 CCDC144CPQ8IYA2 1237 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
ACTN1-203ENST00000394419 A0A1B0GUL7 405 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 SCRN1Q12765 414 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 DHX32Q7L7V1 743 aaKnown RBP12.38□□□□□ -0.43
ACTN1-203ENST00000394419 GTF3C6Q969F1 213 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 FAM89AQ96GI7 184 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
ACTN1-203ENST00000394419 A0A0G2JLW4 131 aa12.37□□□□□ -0.43
ACTN1-203ENST00000394419 IDH1O75874 414 aaKnown RBP12.37□□□□□ -0.43
ACTN1-203ENST00000394419 TRDNQ13061 729 aa12.37□□□□□ -0.43
ACTN1-203ENST00000394419 KBTBD3Q8NAB2 608 aa12.37□□□□□ -0.43
ACTN1-203ENST00000394419 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-203ENST00000394419 TRMT1Q9NXH9 659 aaKnown RBP12.37□□□□□ -0.43
ACTN1-203ENST00000394419 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
ACTN1-203ENST00000394419 PXDNLA1KZ92 1463 aa12.37□□□□□ -0.43
ACTN1-203ENST00000394419 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
ACTN1-203ENST00000394419 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
ACTN1-203ENST00000394419 RXRAP19793 462 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 ATP2B1P20020 1258 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 MRVI1Q9Y6F6 885 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 AP5Z1O43299 807 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 CBX1P83916 185 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 PLBD2Q8NHP8 589 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 ZNF396Q96N95 335 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-203ENST00000394419 SMC2O95347 1197 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
ACTN1-203ENST00000394419 GOLGA8BA8MQT2 603 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 METTL24Q5JXM2 366 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 ZCRB1Q8TBF4 217 aaKnown RBP12.35□□□□□ -0.43
ACTN1-203ENST00000394419 MAP7D2Q96T17 732 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 A0A1B0GVL5 298 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
ACTN1-203ENST00000394419 HAUS7Q99871 368 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 KLF18A0A0U1RQI7 1052 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 TPM3P06753 285 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-203ENST00000394419 IMMTQ16891 758 aaKnown RBP12.35□□□□□ -0.43
ACTN1-203ENST00000394419 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 C8orf76Q96K31 380 aa12.35□□□□□ -0.43
ACTN1-203ENST00000394419 E7EWF7 191 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
ACTN1-203ENST00000394419 PI16Q6UXB8 463 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 USP28Q96RU2 1077 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-203ENST00000394419 HSPD1P10809 573 aaKnown RBP12.34□□□□□ -0.43
ACTN1-203ENST00000394419 LRRFIP1Q32MZ4 808 aaKnown RBP12.34□□□□□ -0.43
ACTN1-203ENST00000394419 CLSTN2Q9H4D0 955 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 GJB4Q9NTQ9 266 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 ORC3Q9UBD5 711 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-203ENST00000394419 EYA2O00167 538 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 TNNT1P13805 278 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 HSPA2P54652 639 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
ACTN1-203ENST00000394419 LDHAL6AQ6ZMR3 332 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 STOX1Q6ZVD7 989 aa12.34□□□□□ -0.43
ACTN1-203ENST00000394419 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-203ENST00000394419 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
ACTN1-203ENST00000394419 PDIA4P13667 645 aaKnown RBP12.33□□□□□ -0.44
ACTN1-203ENST00000394419 ADORA1P30542 326 aa12.33□□□□□ -0.44
ACTN1-203ENST00000394419 KIF6Q6ZMV9 814 aa12.33□□□□□ -0.44
ACTN1-203ENST00000394419 RIOK3O14730 519 aaKnown RBP12.33□□□□□ -0.44
ACTN1-203ENST00000394419 ZNF213O14771 459 aa12.33□□□□□ -0.44
ACTN1-203ENST00000394419 MARCKSP29966 332 aaPredicted RBP12.33□□□□□ -0.44
ACTN1-203ENST00000394419 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
ACTN1-203ENST00000394419 AOPEPQ8N6M6 819 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 PRIMPOLQ96LW4 560 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 NBPF26B4DH59 902 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 PRC1O43663 620 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 NBPF14Q5TI25 921 aa12.32□□□□□ -0.44
ACTN1-203ENST00000394419 NBPF10Q6P3W6 841 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms