RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 TTLL12Q14166 644 aaPredicted RBP16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 ERMNQ8TAM6 284 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 SLC52A2Q9HAB3 445 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 RMND1Q9NWS8 449 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 MAGI3Q5TCQ9 1506 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 SEPT11Q9NVA2 429 aaKnown RBP16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 CACNA2D4Q7Z3S7 1137 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 PAF1Q8N7H5 531 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 RLBP1P12271 317 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 NMIQ13287 307 aaPredicted RBP16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 KLHL10Q6JEL2 608 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 CALML3P27482 149 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 NBPF14Q5TI25 921 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 PA2G4Q9UQ80 394 aaKnown RBP16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 EYA2O00167 538 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 GTPBP4Q9BZE4 634 aaKnown RBP16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 HELLSQ9NRZ9 838 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 CERS3Q8IU89 383 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 ALG1Q9BT22 464 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 BRPF3Q9ULD4 1205 aa16.61■□□□□ 0.25
PPARGC1B-203ENST00000394320 RTL1A6NKG5 1358 aa16.6■□□□□ 0.25
PPARGC1B-203ENST00000394320 GBP3Q9H0R5 595 aa16.6■□□□□ 0.25
PPARGC1B-203ENST00000394320 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
PPARGC1B-203ENST00000394320 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
PPARGC1B-203ENST00000394320 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
PPARGC1B-203ENST00000394320 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
PPARGC1B-203ENST00000394320 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 YEATS4O95619 227 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 PLEKHG1Q9ULL1 1385 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 INTS4Q96HW7 963 aaKnown RBP16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 BICC1Q9H694 974 aaKnown RBP16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 PRC1O43663 620 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 TFCP2Q12800 502 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 CCDC150Q8NCX0 1101 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 CCDC171Q6TFL3 1326 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 EFCAB6Q5THR3 1501 aa16.59■□□□□ 0.25
PPARGC1B-203ENST00000394320 KDM5AP29375 1690 aaKnown RBP16.58■□□□□ 0.25
PPARGC1B-203ENST00000394320 ERVV-2B6SEH9 535 aa16.58■□□□□ 0.25
PPARGC1B-203ENST00000394320 POLD1P28340 1107 aa16.58■□□□□ 0.25
PPARGC1B-203ENST00000394320 MYOM2P54296 1465 aa16.58■□□□□ 0.25
PPARGC1B-203ENST00000394320 USO1O60763 962 aaKnown RBP16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 RBM17Q96I25 401 aaKnown RBP16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 KIF5CO60282 957 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 AXDND1Q5T1B0 1012 aaPredicted RBP16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 Q6ZUG5 572 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 TRIM35Q9UPQ4 493 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 PDE8AO60658 829 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 PTPN14Q15678 1187 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 DHX32Q7L7V1 743 aaKnown RBP16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 CCDC144CPQ8IYA2 1237 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 KRI1Q8N9T8 703 aaKnown RBP16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 SCLT1Q96NL6 688 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
PPARGC1B-203ENST00000394320 BLMP54132 1417 aaPredicted RBP16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 GOLGA6L9A6NEM1 432 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 CHMLP26374 656 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 CLIP2Q9UDT6 1046 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 PDCL2Q8N4E4 241 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 LDHBP07195 334 aaKnown RBP16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 ZNF165P49910 485 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 SPAG1Q07617 926 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 CKAP2LQ8IYA6 745 aa16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 FAM177A1Q8N128 213 aaPredicted RBP16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
PPARGC1B-203ENST00000394320 YEATS2Q9ULM3 1422 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 SYKP43405 635 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 UBXN4Q92575 508 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 ERBB4Q15303 1308 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 IDEP14735 1019 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 WDR78Q5VTH9 848 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 KIF18AQ8NI77 898 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 CREB3L3Q68CJ9 461 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 ATL3Q6DD88 541 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 C6orf50Q9HD87 102 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 B4DLN1 442 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 GNPATO15228 680 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 MRPL12P52815 198 aaKnown RBP16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 PUM3Q15397 648 aaKnown RBP16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 TTC6Q86TZ1 520 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 CNBD1Q8NA66 436 aa16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 MRPS27Q92552 414 aaKnown RBP16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
PPARGC1B-203ENST00000394320 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
PPARGC1B-203ENST00000394320 C16orf71Q8IYS4 520 aaPredicted RBP16.55■□□□□ 0.24
PPARGC1B-203ENST00000394320 CCNL1Q9UK58 526 aaPredicted RBP16.55■□□□□ 0.24
PPARGC1B-203ENST00000394320 SAMD9LQ8IVG5 1584 aa16.55■□□□□ 0.24
PPARGC1B-203ENST00000394320 FAM135BQ49AJ0 1406 aa16.55■□□□□ 0.24
PPARGC1B-203ENST00000394320 MCM3P25205 808 aa16.55■□□□□ 0.24
PPARGC1B-203ENST00000394320 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
PPARGC1B-203ENST00000394320 LTKP29376 864 aa16.54■□□□□ 0.24
PPARGC1B-203ENST00000394320 C8orf34Q49A92 452 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms