RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 IP6K1Q92551 441 aa21.19■□□□□ 0.98
ERCC2-201ENST00000391941 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
ERCC2-201ENST00000391941 SMTNL1A8MU46 457 aa21.18■□□□□ 0.98
ERCC2-201ENST00000391941 UTP14CQ5TAP6 766 aaKnown RBP21.18■□□□□ 0.98
ERCC2-201ENST00000391941 ZBTB9Q96C00 473 aa21.18■□□□□ 0.98
ERCC2-201ENST00000391941 CHMP4AQ9BY43 222 aa21.18■□□□□ 0.98
ERCC2-201ENST00000391941 C1orf141Q5JVX7 400 aa21.18■□□□□ 0.98
ERCC2-201ENST00000391941 AOPEPQ8N6M6 819 aa21.18■□□□□ 0.98
ERCC2-201ENST00000391941 MED1Q15648 1581 aaPredicted RBP21.17■□□□□ 0.98
ERCC2-201ENST00000391941 MARF1Q9Y4F3 1742 aaKnown RBP21.17■□□□□ 0.98
ERCC2-201ENST00000391941 CCDC69A6NI79 296 aa21.17■□□□□ 0.98
ERCC2-201ENST00000391941 CTDNEP1O95476 244 aa21.17■□□□□ 0.98
ERCC2-201ENST00000391941 BECN2A8MW95 431 aa21.17■□□□□ 0.98
ERCC2-201ENST00000391941 ZBTB22O15209 634 aa21.17■□□□□ 0.98
ERCC2-201ENST00000391941 ADD1P35611 737 aaKnown RBP21.17■□□□□ 0.98
ERCC2-201ENST00000391941 ELF2Q15723 593 aa21.17■□□□□ 0.98
ERCC2-201ENST00000391941 XAGE3Q8WTP9 111 aa21.17■□□□□ 0.98
ERCC2-201ENST00000391941 A0A1B0GVL5 298 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 ME1P48163 572 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 RBM43Q6ZSC3 357 aaKnown RBP21.16■□□□□ 0.98
ERCC2-201ENST00000391941 COPS6Q7L5N1 327 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 LINS1Q8NG48 757 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 SNRKQ9NRH2 765 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 ESCO1Q5FWF5 840 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 UBE3BQ7Z3V4 1068 aa21.16■□□□□ 0.98
ERCC2-201ENST00000391941 PDIA4P13667 645 aaKnown RBP21.15■□□□□ 0.98
ERCC2-201ENST00000391941 PDIA6Q15084 440 aa21.15■□□□□ 0.98
ERCC2-201ENST00000391941 KMT5BQ4FZB7 885 aa21.15■□□□□ 0.98
ERCC2-201ENST00000391941 ZNF609O15014 1411 aa21.15■□□□□ 0.98
ERCC2-201ENST00000391941 HSP90AB3PQ58FF7 597 aa21.15■□□□□ 0.98
ERCC2-201ENST00000391941 DHX40Q8IX18 779 aaKnown RBP21.15■□□□□ 0.98
ERCC2-201ENST00000391941 TTLL5Q6EMB2 1281 aa21.15■□□□□ 0.98
ERCC2-201ENST00000391941 AXIN2Q9Y2T1 843 aa21.15■□□□□ 0.98
ERCC2-201ENST00000391941 PTPDC1A2A3K4 754 aa21.14■□□□□ 0.97
ERCC2-201ENST00000391941 SNW1Q13573 536 aaKnown RBP21.14■□□□□ 0.97
ERCC2-201ENST00000391941 POLR3DP05423 398 aaPredicted RBP21.14■□□□□ 0.97
ERCC2-201ENST00000391941 PSME1Q06323 249 aa21.14■□□□□ 0.97
ERCC2-201ENST00000391941 FSIP1Q8NA03 581 aa21.14■□□□□ 0.97
ERCC2-201ENST00000391941 NEUROD6Q96NK8 337 aa21.14■□□□□ 0.97
ERCC2-201ENST00000391941 PHF8Q9UPP1 1060 aa21.14■□□□□ 0.97
ERCC2-201ENST00000391941 KDM3BQ7LBC6 1761 aa21.13■□□□□ 0.97
ERCC2-201ENST00000391941 CGNQ9P2M7 1197 aaKnown RBP21.13■□□□□ 0.97
ERCC2-201ENST00000391941 PTPN14Q15678 1187 aa21.13■□□□□ 0.97
ERCC2-201ENST00000391941 ILDR1Q86SU0 546 aaPredicted RBP21.13■□□□□ 0.97
ERCC2-201ENST00000391941 NSUN7Q8NE18 718 aaKnown RBP21.13■□□□□ 0.97
ERCC2-201ENST00000391941 GTPBP4Q9BZE4 634 aaKnown RBP21.13■□□□□ 0.97
ERCC2-201ENST00000391941 HDAC5Q9UQL6 1122 aa21.13■□□□□ 0.97
ERCC2-201ENST00000391941 RGPD2P0DJD1 1756 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 NEURL1BA8MQ27 555 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 GOLIM4O00461 696 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 GOLGA8FQ08AF8 430 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 GOLGA8DPQ0D2H9 430 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 PLEKHO1Q53GL0 409 aaPredicted RBP21.12■□□□□ 0.97
ERCC2-201ENST00000391941 GORABQ5T7V8 394 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 ALDH8A1Q9H2A2 487 aaPredicted RBP21.12■□□□□ 0.97
ERCC2-201ENST00000391941 TIMM10P62072 90 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 CCZ1BP86790 482 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 CCZ1P86791 482 aaPredicted RBP21.12■□□□□ 0.97
ERCC2-201ENST00000391941 TNNI3KQ59H18 835 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 FBXO38Q6PIJ6 1188 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 FPGT-TNNI3KV9GXZ4 949 aa21.12■□□□□ 0.97
ERCC2-201ENST00000391941 HAND2P61296 217 aa21.11■□□□□ 0.97
ERCC2-201ENST00000391941 ANKARQ7Z5J8 1434 aa21.11■□□□□ 0.97
ERCC2-201ENST00000391941 ERICH4A6NGS2 130 aa21.11■□□□□ 0.97
ERCC2-201ENST00000391941 DPCR1Q3MIW9 517 aa21.11■□□□□ 0.97
ERCC2-201ENST00000391941 HMG20BQ9P0W2 317 aa21.11■□□□□ 0.97
ERCC2-201ENST00000391941 GCKRQ14397 625 aa21.11■□□□□ 0.97
ERCC2-201ENST00000391941 KIF18AQ8NI77 898 aa21.11■□□□□ 0.97
ERCC2-201ENST00000391941 ADGRL3Q9HAR2 1447 aa21.1■□□□□ 0.97
ERCC2-201ENST00000391941 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.1■□□□□ 0.97
ERCC2-201ENST00000391941 NFATC2IPQ8NCF5 419 aa21.1■□□□□ 0.97
ERCC2-201ENST00000391941 OGFRQ9NZT2 677 aa21.1■□□□□ 0.97
ERCC2-201ENST00000391941 CHD2O14647 1828 aaKnown RBP21.1■□□□□ 0.97
ERCC2-201ENST00000391941 KINO60870 393 aaKnown RBP21.1■□□□□ 0.97
ERCC2-201ENST00000391941 PTPN12Q05209 780 aaKnown RBP21.1■□□□□ 0.97
ERCC2-201ENST00000391941 TSGA10IPQ3SY00 556 aa21.1■□□□□ 0.97
ERCC2-201ENST00000391941 SMC2O95347 1197 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 HSP90AA4PQ58FG1 418 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 CCDC73Q6ZRK6 1079 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 SDF4Q9BRK5 362 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 DDX41Q9UJV9 622 aaKnown RBP21.09■□□□□ 0.97
ERCC2-201ENST00000391941 UTYO14607 1347 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 STX1AQ16623 288 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 NBPF11Q86T75 865 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 TMX1Q9H3N1 280 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 ERBB3P21860 1342 aa21.09■□□□□ 0.97
ERCC2-201ENST00000391941 NDUFA8P51970 172 aa21.08■□□□□ 0.97
ERCC2-201ENST00000391941 ANKRD24Q8TF21 1146 aa21.08■□□□□ 0.97
ERCC2-201ENST00000391941 CFAP45Q9UL16 551 aa21.08■□□□□ 0.97
ERCC2-201ENST00000391941 ZC3H6P61129 1189 aaKnown RBP21.08■□□□□ 0.96
ERCC2-201ENST00000391941 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.96
ERCC2-201ENST00000391941 CLIC4Q9Y696 253 aa21.08■□□□□ 0.96
ERCC2-201ENST00000391941 JCADQ9P266 1359 aa21.08■□□□□ 0.96
ERCC2-201ENST00000391941 ERCC6LQ2NKX8 1250 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 ORAI2Q96SN7 254 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 PCDHA7Q9UN72 937 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 LTN1O94822 1766 aa21.07■□□□□ 0.96
ERCC2-201ENST00000391941 DDX58O95786 925 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms