RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 LLPHQ9BRT6 129 aaKnown RBP21.5■■□□□ 1.03
TDP2-202ENST00000378198 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
TDP2-202ENST00000378198 ZSCAN16Q9H4T2 348 aaPredicted RBP21.5■■□□□ 1.03
TDP2-202ENST00000378198 CWC25Q9NXE8 425 aaPredicted RBP21.5■■□□□ 1.03
TDP2-202ENST00000378198 TFIP11Q9UBB9 837 aaKnown RBP21.5■■□□□ 1.03
TDP2-202ENST00000378198 PLCB2Q00722 1185 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 NOLC1Q14978 699 aaKnown RBP eCLIP21.49■■□□□ 1.03
TDP2-202ENST00000378198 ATG9AQ7Z3C6 839 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 DSCC1Q9BVC3 393 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 CHMP3Q9Y3E7 222 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 DYNC1I1O14576 645 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 JAK2O60674 1132 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 IL15P40933 162 aaPredicted RBP21.49■■□□□ 1.03
TDP2-202ENST00000378198 RESTQ13127 1097 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 NBPF14Q5TI25 921 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
TDP2-202ENST00000378198 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 BRF1Q92994 677 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 TTC12Q9H892 705 aaPredicted RBP21.49■■□□□ 1.03
TDP2-202ENST00000378198 PAG1Q9NWQ8 432 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 DACT1Q9NYF0 836 aa21.49■■□□□ 1.03
TDP2-202ENST00000378198 TYRO3Q06418 890 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 SMARCC2Q8TAQ2 1214 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 NEUROD6Q96NK8 337 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 MRVI1Q9Y6F6 885 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 SPATA31A3Q5VYP0 1347 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 GOLGA6L6A8MZA4 724 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 H3BQV1 296 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 AP5Z1O43299 807 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 CHGBP05060 677 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 IFFO2Q5TF58 517 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 RBM43Q6ZSC3 357 aaKnown RBP21.48■■□□□ 1.03
TDP2-202ENST00000378198 DHX32Q7L7V1 743 aaKnown RBP21.48■■□□□ 1.03
TDP2-202ENST00000378198 MPNDQ8N594 471 aa21.48■■□□□ 1.03
TDP2-202ENST00000378198 PFKFB2O60825 505 aa21.47■■□□□ 1.03
TDP2-202ENST00000378198 FGD1P98174 961 aa21.47■■□□□ 1.03
TDP2-202ENST00000378198 CAMK4Q16566 473 aa21.47■■□□□ 1.03
TDP2-202ENST00000378198 DNTTIP2Q5QJE6 756 aaKnown RBP21.47■■□□□ 1.03
TDP2-202ENST00000378198 CADPS2Q86UW7 1296 aa21.47■■□□□ 1.03
TDP2-202ENST00000378198 CLSTN2Q9H4D0 955 aa21.47■■□□□ 1.03
TDP2-202ENST00000378198 CFAP45Q9UL16 551 aa21.47■■□□□ 1.03
TDP2-202ENST00000378198 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
TDP2-202ENST00000378198 PCDH11XQ9BZA7 1347 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 PCDH11YQ9BZA8 1340 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 ATG3Q9NT62 314 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 GOLIM4O00461 696 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 SCRN1Q12765 414 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 ZMYM1Q5SVZ6 1142 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 STOX1Q6ZVD7 989 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 CCDC191Q8NCU4 936 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 MAP7D2Q96T17 732 aa21.46■■□□□ 1.03
TDP2-202ENST00000378198 ERVV-2B6SEH9 535 aa21.45■■□□□ 1.02
TDP2-202ENST00000378198 TTLL7Q6ZT98 887 aa21.45■■□□□ 1.02
TDP2-202ENST00000378198 SPTLC3Q9NUV7 552 aa21.45■■□□□ 1.02
TDP2-202ENST00000378198 EYA2O00167 538 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 CIAO1O76071 339 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 TIMM10P62072 90 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 AGXT2Q9BYV1 514 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 HMGN5P82970 282 aaKnown RBP21.44■■□□□ 1.02
TDP2-202ENST00000378198 ZCRB1Q8TBF4 217 aaKnown RBP21.44■■□□□ 1.02
TDP2-202ENST00000378198 BICD2Q8TD16 824 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 PGBD1Q96JS3 809 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 PRIMPOLQ96LW4 560 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 KIF3AQ9Y496 699 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 KCPQ6ZWJ8 1503 aa21.44■■□□□ 1.02
TDP2-202ENST00000378198 EXOSC10Q01780 885 aaKnown RBP21.43■■□□□ 1.02
TDP2-202ENST00000378198 NAA16Q6N069 864 aaPredicted RBP21.43■■□□□ 1.02
TDP2-202ENST00000378198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.43■■□□□ 1.02
TDP2-202ENST00000378198 DDX11Q96FC9 970 aa21.43■■□□□ 1.02
TDP2-202ENST00000378198 CCDC9Q9Y3X0 531 aaKnown RBP21.43■■□□□ 1.02
TDP2-202ENST00000378198 IFIT1P09914 478 aaKnown RBP21.43■■□□□ 1.02
TDP2-202ENST00000378198 CKAP2LQ8IYA6 745 aa21.43■■□□□ 1.02
TDP2-202ENST00000378198 CHMP4CQ96CF2 233 aa21.43■■□□□ 1.02
TDP2-202ENST00000378198 LRRC2Q9BYS8 371 aa21.43■■□□□ 1.02
TDP2-202ENST00000378198 RBM10P98175 930 aaKnown RBP21.42■■□□□ 1.02
TDP2-202ENST00000378198 ANO6Q4KMQ2 910 aa21.42■■□□□ 1.02
TDP2-202ENST00000378198 NSUN7Q8NE18 718 aaKnown RBP21.42■■□□□ 1.02
TDP2-202ENST00000378198 RNF113AO15541 343 aaKnown RBP21.41■■□□□ 1.02
TDP2-202ENST00000378198 NR1I2O75469 434 aa21.41■■□□□ 1.02
TDP2-202ENST00000378198 HSPD1P10809 573 aaKnown RBP21.41■■□□□ 1.02
TDP2-202ENST00000378198 MYRIPQ8NFW9 859 aa21.41■■□□□ 1.02
TDP2-202ENST00000378198 WDR17Q8IZU2 1322 aa21.41■■□□□ 1.02
TDP2-202ENST00000378198 A1BGP04217 495 aa21.41■■□□□ 1.02
TDP2-202ENST00000378198 LUZP1Q86V48 1076 aa21.41■■□□□ 1.02
TDP2-202ENST00000378198 KIAA1524Q8TCG1 905 aa21.41■■□□□ 1.02
TDP2-202ENST00000378198 CBX8Q9HC52 389 aa21.41■■□□□ 1.02
TDP2-202ENST00000378198 A0A1B0GUL7 405 aa21.4■■□□□ 1.02
TDP2-202ENST00000378198 E7EWF7 191 aa21.4■■□□□ 1.02
TDP2-202ENST00000378198 CAVIN2O95810 425 aa21.4■■□□□ 1.02
TDP2-202ENST00000378198 NKX1-1Q15270 411 aaPredicted RBP21.4■■□□□ 1.02
TDP2-202ENST00000378198 LRRC24Q50LG9 513 aa21.4■■□□□ 1.02
TDP2-202ENST00000378198 MTERF4Q7Z6M4 381 aaKnown RBP21.4■■□□□ 1.02
TDP2-202ENST00000378198 FAM13BQ9NYF5 915 aa21.4■■□□□ 1.02
TDP2-202ENST00000378198 APOBRQ0VD83 1088 aa21.4■■□□□ 1.02
TDP2-202ENST00000378198 LRRFIP1Q32MZ4 808 aaKnown RBP21.4■■□□□ 1.02
TDP2-202ENST00000378198 ATL3Q6DD88 541 aa21.4■■□□□ 1.02
TDP2-202ENST00000378198 MAST3O60307 1309 aa21.39■■□□□ 1.02
TDP2-202ENST00000378198 SPC24Q8NBT2 197 aa21.39■■□□□ 1.01
TDP2-202ENST00000378198 ZNF274Q96GC6 653 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms