RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SLIT3O75094 1523 aa19.58■□□□□ 0.72
PCDHA1-201ENST00000378133 CKAP2LQ8IYA6 745 aa19.57■□□□□ 0.72
PCDHA1-201ENST00000378133 TFCP2Q12800 502 aa19.57■□□□□ 0.72
PCDHA1-201ENST00000378133 ANO6Q4KMQ2 910 aa19.57■□□□□ 0.72
PCDHA1-201ENST00000378133 NPHP3Q7Z494 1330 aa19.57■□□□□ 0.72
PCDHA1-201ENST00000378133 TNMDQ9H2S6 317 aa19.57■□□□□ 0.72
PCDHA1-201ENST00000378133 CBX8Q9HC52 389 aa19.57■□□□□ 0.72
PCDHA1-201ENST00000378133 PAXBP1Q9Y5B6 917 aa19.57■□□□□ 0.72
PCDHA1-201ENST00000378133 HMG20BQ9P0W2 317 aa19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 TSGA10IPQ3SY00 556 aa19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 TNNI3KQ59H18 835 aa19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 ZSCAN25Q6NSZ9 544 aa19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 CCDC112Q8NEF3 446 aa19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 ALDH8A1Q9H2A2 487 aaPredicted RBP19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 COPRSQ9NQ92 184 aa19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 FPGT-TNNI3KV9GXZ4 949 aa19.56■□□□□ 0.72
PCDHA1-201ENST00000378133 RGPD5Q99666 1765 aa19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 ATP5JP18859 108 aa19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 COL15A1P39059 1388 aa19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 PHKG2P15735 406 aa19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 RFX5P48382 616 aaPredicted RBP19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 NAA30Q147X3 362 aaPredicted RBP19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 CCDC129Q6ZRS4 1044 aa19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 SEC62Q99442 399 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 DACT1Q9NYF0 836 aa19.55■□□□□ 0.72
PCDHA1-201ENST00000378133 ELP1O95163 1332 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 GOLGA6L4A6NEF3 574 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 ZNF75DP51815 510 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 TPD52L1Q16890 204 aaPredicted RBP19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 CADPS2Q86UW7 1296 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 SPATA32Q96LK8 384 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 DNAJC2Q99543 621 aaKnown RBP19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 KDM6AO15550 1401 aaPredicted RBP19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 JAK2O60674 1132 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 USPL1Q5W0Q7 1092 aa19.54■□□□□ 0.72
PCDHA1-201ENST00000378133 TAF3Q5VWG9 929 aa19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 PLA2G4DQ86XP0 818 aa19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 NEK1Q96PY6 1258 aa19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 DDX41Q9UJV9 622 aaKnown RBP19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 CCDC9Q9Y3X0 531 aaKnown RBP19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 TATP17735 454 aaPredicted RBP19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 GABPB1Q06547 395 aaPredicted RBP19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 LRP10Q7Z4F1 713 aa19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 DBNDD2Q9BQY9 259 aa19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 SCAND2PQ9GZW5 306 aaPredicted RBP19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 JCADQ9P266 1359 aa19.53■□□□□ 0.72
PCDHA1-201ENST00000378133 C5P01031 1676 aa19.52■□□□□ 0.72
PCDHA1-201ENST00000378133 SNRPA1P09661 255 aaKnown RBP19.52■□□□□ 0.72
PCDHA1-201ENST00000378133 LEO1Q8WVC0 666 aaPredicted RBP19.52■□□□□ 0.72
PCDHA1-201ENST00000378133 KRT32Q14532 448 aa19.52■□□□□ 0.71
PCDHA1-201ENST00000378133 Q6ZUG5 572 aa19.52■□□□□ 0.71
PCDHA1-201ENST00000378133 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.71
PCDHA1-201ENST00000378133 CLIP2Q9UDT6 1046 aa19.52■□□□□ 0.71
PCDHA1-201ENST00000378133 A0A087WZG4 1122 aa19.51■□□□□ 0.71
PCDHA1-201ENST00000378133 DDX46Q7L014 1031 aaKnown RBP19.51■□□□□ 0.71
PCDHA1-201ENST00000378133 CACTINQ8WUQ7 758 aaKnown RBP19.51■□□□□ 0.71
PCDHA1-201ENST00000378133 ZNF592Q92610 1267 aa19.51■□□□□ 0.71
PCDHA1-201ENST00000378133 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
PCDHA1-201ENST00000378133 GTF3C6Q969F1 213 aa19.51■□□□□ 0.71
PCDHA1-201ENST00000378133 LRRC2Q9BYS8 371 aa19.51■□□□□ 0.71
PCDHA1-201ENST00000378133 ADAMTS7Q9UKP4 1686 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 CAMTA1Q9Y6Y1 1673 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 CYP21A2P08686 494 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 HSP90B1P14625 803 aaKnown RBP19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 IFNL2Q8IZJ0 200 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 TDRD7Q8NHU6 1098 aaKnown RBP19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 DDX19AQ9NUU7 478 aaKnown RBP19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 MORC2Q9Y6X9 1032 aaPredicted RBP19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 MRC1P22897 1456 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 ZNF165P49910 485 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 ZNF609O15014 1411 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 ALS2Q96Q42 1657 aa19.5■□□□□ 0.71
PCDHA1-201ENST00000378133 RABL6Q3YEC7 729 aaPredicted RBP19.49■□□□□ 0.71
PCDHA1-201ENST00000378133 MCMDC2Q4G0Z9 681 aa19.49■□□□□ 0.71
PCDHA1-201ENST00000378133 CEP135Q66GS9 1140 aa19.49■□□□□ 0.71
PCDHA1-201ENST00000378133 KIF18AQ8NI77 898 aa19.49■□□□□ 0.71
PCDHA1-201ENST00000378133 BRF1Q92994 677 aa19.49■□□□□ 0.71
PCDHA1-201ENST00000378133 CSB-PGBD3P0DP91 1061 aa19.49■□□□□ 0.71
PCDHA1-201ENST00000378133 PGBD1Q96JS3 809 aa19.49■□□□□ 0.71
PCDHA1-201ENST00000378133 NR1I2O75469 434 aa19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 SLFN14P0C7P3 912 aa19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 HAUS7Q99871 368 aa19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 DNAJC25Q9H1X3 360 aa19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 CLSTN2Q9H4D0 955 aa19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 U3KPZ7 1027 aaPredicted RBP19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 SLFNL1Q499Z3 407 aa19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 SCN11AQ9UI33 1791 aa19.48■□□□□ 0.71
PCDHA1-201ENST00000378133 CCDC144BQ3MJ40 725 aa19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 RBM43Q6ZSC3 357 aaKnown RBP19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 CCDC144CPQ8IYA2 1237 aa19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 BICD2Q8TD16 824 aa19.47■□□□□ 0.71
PCDHA1-201ENST00000378133 FMNL2Q96PY5 1086 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms