RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 SASH1O94885 1247 aa26.39■■□□□ 1.82
CBWD3-202ENST00000377342 MPHOSPH8Q99549 860 aa26.39■■□□□ 1.82
CBWD3-202ENST00000377342 CENPQQ7L2Z9 268 aaPredicted RBP26.38■■□□□ 1.81
CBWD3-202ENST00000377342 CNNM1Q9NRU3 951 aa26.38■■□□□ 1.81
CBWD3-202ENST00000377342 ARAP2Q8WZ64 1704 aa26.38■■□□□ 1.81
CBWD3-202ENST00000377342 PPEF1O14829 653 aaPredicted RBP26.38■■□□□ 1.81
CBWD3-202ENST00000377342 ALDH1B1P30837 517 aa26.38■■□□□ 1.81
CBWD3-202ENST00000377342 IL15P40933 162 aaPredicted RBP26.38■■□□□ 1.81
CBWD3-202ENST00000377342 G3BP1Q13283 466 aaKnown RBP eCLIP26.38■■□□□ 1.81
CBWD3-202ENST00000377342 PRPF40BQ6NWY9 871 aaKnown RBP26.38■■□□□ 1.81
CBWD3-202ENST00000377342 ARFGEF1Q9Y6D6 1849 aa26.37■■□□□ 1.81
CBWD3-202ENST00000377342 APBB1O00213 710 aa26.37■■□□□ 1.81
CBWD3-202ENST00000377342 OS9Q13438 667 aaPredicted RBP26.37■■□□□ 1.81
CBWD3-202ENST00000377342 VGLL2Q8N8G2 317 aa26.37■■□□□ 1.81
CBWD3-202ENST00000377342 CNKSR1Q969H4 720 aa26.37■■□□□ 1.81
CBWD3-202ENST00000377342 DUOX1Q9NRD9 1551 aa26.36■■□□□ 1.81
CBWD3-202ENST00000377342 BBOX1O75936 387 aa26.36■■□□□ 1.81
CBWD3-202ENST00000377342 HSP90AB4PQ58FF6 505 aa26.36■■□□□ 1.81
CBWD3-202ENST00000377342 SNED1Q8TER0 1413 aa26.36■■□□□ 1.81
CBWD3-202ENST00000377342 RAB11FIP3O75154 756 aa26.35■■□□□ 1.81
CBWD3-202ENST00000377342 MINPP1Q9UNW1 487 aa26.35■■□□□ 1.81
CBWD3-202ENST00000377342 RHPN1Q8TCX5 695 aa26.34■■□□□ 1.81
CBWD3-202ENST00000377342 MROH5Q6ZUA9 1318 aa26.34■■□□□ 1.81
CBWD3-202ENST00000377342 CHRNDQ07001 517 aa26.34■■□□□ 1.81
CBWD3-202ENST00000377342 TFCP2Q12800 502 aa26.34■■□□□ 1.81
CBWD3-202ENST00000377342 ERC1Q8IUD2 1116 aa26.34■■□□□ 1.81
CBWD3-202ENST00000377342 ZNF609O15014 1411 aa26.34■■□□□ 1.81
CBWD3-202ENST00000377342 SMARCA5O60264 1052 aaPredicted RBP26.33■■□□□ 1.81
CBWD3-202ENST00000377342 OLFM4Q6UX06 510 aa26.33■■□□□ 1.81
CBWD3-202ENST00000377342 TMC4Q7Z404 712 aa26.33■■□□□ 1.81
CBWD3-202ENST00000377342 KIF1BPQ96EK5 621 aa26.33■■□□□ 1.81
CBWD3-202ENST00000377342 ATP6V0A2Q9Y487 856 aa26.33■■□□□ 1.81
CBWD3-202ENST00000377342 METTL24Q5JXM2 366 aa26.32■■□□□ 1.8
CBWD3-202ENST00000377342 TTLL6Q8N841 843 aa26.32■■□□□ 1.8
CBWD3-202ENST00000377342 C7orf43Q8WVR3 580 aa26.32■■□□□ 1.8
CBWD3-202ENST00000377342 LRRCC1Q9C099 1032 aa26.32■■□□□ 1.8
CBWD3-202ENST00000377342 PIM2Q9P1W9 311 aa26.32■■□□□ 1.8
CBWD3-202ENST00000377342 NUCB1Q02818 461 aa26.31■■□□□ 1.8
CBWD3-202ENST00000377342 HELBQ8NG08 1087 aaPredicted RBP26.31■■□□□ 1.8
CBWD3-202ENST00000377342 SYT17Q9BSW7 474 aa26.31■■□□□ 1.8
CBWD3-202ENST00000377342 IL1RAPL2Q9NP60 686 aa26.31■■□□□ 1.8
CBWD3-202ENST00000377342 SP8Q8IXZ3 490 aa26.31■■□□□ 1.8
CBWD3-202ENST00000377342 WWC3Q9ULE0 1092 aa26.31■■□□□ 1.8
CBWD3-202ENST00000377342 ANKRD45Q5TZF3 282 aa26.3■■□□□ 1.8
CBWD3-202ENST00000377342 FER1L6Q2WGJ9 1857 aa26.29■■□□□ 1.8
CBWD3-202ENST00000377342 TAF5LO75529 589 aa26.29■■□□□ 1.8
CBWD3-202ENST00000377342 PDE8BO95263 885 aa26.28■■□□□ 1.8
CBWD3-202ENST00000377342 CEP126Q9P2H0 1117 aa26.28■■□□□ 1.8
CBWD3-202ENST00000377342 WTIPA6NIX2 430 aaPredicted RBP26.28■■□□□ 1.8
CBWD3-202ENST00000377342 SNAP23O00161 211 aa26.28■■□□□ 1.8
CBWD3-202ENST00000377342 GPSM2P81274 684 aa26.28■■□□□ 1.8
CBWD3-202ENST00000377342 TNNI3KQ59H18 835 aa26.27■■□□□ 1.8
CBWD3-202ENST00000377342 DALRD3Q5D0E6 543 aaKnown RBP26.27■■□□□ 1.8
CBWD3-202ENST00000377342 CHD1LQ86WJ1 897 aa26.27■■□□□ 1.8
CBWD3-202ENST00000377342 LNPKQ9C0E8 428 aa26.27■■□□□ 1.8
CBWD3-202ENST00000377342 ZNF219Q9P2Y4 722 aaPredicted RBP26.27■■□□□ 1.8
CBWD3-202ENST00000377342 FPGT-TNNI3KV9GXZ4 949 aa26.27■■□□□ 1.8
CBWD3-202ENST00000377342 XDHP47989 1333 aa26.27■■□□□ 1.8
CBWD3-202ENST00000377342 FGFR2P21802 821 aa26.26■■□□□ 1.79
CBWD3-202ENST00000377342 EAF2Q96CJ1 260 aaPredicted RBP26.26■■□□□ 1.79
CBWD3-202ENST00000377342 ANKRD2Q9GZV1 360 aa26.26■■□□□ 1.79
CBWD3-202ENST00000377342 GPR108Q9NPR9 543 aa26.26■■□□□ 1.79
CBWD3-202ENST00000377342 C21orf2O43822 256 aa26.25■■□□□ 1.79
CBWD3-202ENST00000377342 PODXL2Q9NZ53 605 aa26.25■■□□□ 1.79
CBWD3-202ENST00000377342 PUM3Q15397 648 aaKnown RBP26.25■■□□□ 1.79
CBWD3-202ENST00000377342 SKAP1Q86WV1 359 aa26.25■■□□□ 1.79
CBWD3-202ENST00000377342 ATP2B3Q16720 1220 aa26.24■■□□□ 1.79
CBWD3-202ENST00000377342 OTUD7AQ8TE49 926 aaPredicted RBP26.24■■□□□ 1.79
CBWD3-202ENST00000377342 TLR7Q9NYK1 1049 aaKnown RBP26.24■■□□□ 1.79
CBWD3-202ENST00000377342 A0A1B0GUL7 405 aa26.23■■□□□ 1.79
CBWD3-202ENST00000377342 PDE4AP27815 886 aa26.23■■□□□ 1.79
CBWD3-202ENST00000377342 CLASRPQ8N2M8 674 aaKnown RBP26.23■■□□□ 1.79
CBWD3-202ENST00000377342 BCL11AQ9H165 835 aa26.23■■□□□ 1.79
CBWD3-202ENST00000377342 ANKIB1Q9P2G1 1089 aa26.23■■□□□ 1.79
CBWD3-202ENST00000377342 NSFL1CQ9UNZ2 370 aaKnown RBP26.23■■□□□ 1.79
CBWD3-202ENST00000377342 SALL3Q9BXA9 1300 aa26.23■■□□□ 1.79
CBWD3-202ENST00000377342 IRS2Q9Y4H2 1338 aa26.23■■□□□ 1.79
CBWD3-202ENST00000377342 AACSQ86V21 672 aa26.22■■□□□ 1.79
CBWD3-202ENST00000377342 C16orf71Q8IYS4 520 aaPredicted RBP26.22■■□□□ 1.79
CBWD3-202ENST00000377342 BCS1LQ9Y276 419 aa26.22■■□□□ 1.79
CBWD3-202ENST00000377342 DBNLQ9UJU6 430 aaKnown RBP26.22■■□□□ 1.79
CBWD3-202ENST00000377342 KLRK1P26718 216 aa26.21■■□□□ 1.79
CBWD3-202ENST00000377342 TIMM10P62072 90 aa26.21■■□□□ 1.79
CBWD3-202ENST00000377342 CC2D2BQ6DHV5 1058 aa26.21■■□□□ 1.79
CBWD3-202ENST00000377342 POLLQ9UGP5 575 aa26.21■■□□□ 1.79
CBWD3-202ENST00000377342 AKAP2Q9Y2D5 859 aa26.21■■□□□ 1.79
CBWD3-202ENST00000377342 ZNF804BA4D1E1 1349 aa26.21■■□□□ 1.79
CBWD3-202ENST00000377342 UFL1O94874 794 aa26.2■■□□□ 1.78
CBWD3-202ENST00000377342 ADORA1P30542 326 aa26.2■■□□□ 1.78
CBWD3-202ENST00000377342 UBE4AQ14139 1066 aa26.2■■□□□ 1.78
CBWD3-202ENST00000377342 CCDC93Q567U6 631 aa26.2■■□□□ 1.78
CBWD3-202ENST00000377342 MPNDQ8N594 471 aa26.2■■□□□ 1.78
CBWD3-202ENST00000377342 TBC1D16Q8TBP0 767 aa26.2■■□□□ 1.78
CBWD3-202ENST00000377342 LPIN2Q92539 896 aa26.2■■□□□ 1.78
CBWD3-202ENST00000377342 GPR101Q96P66 508 aaPredicted RBP26.2■■□□□ 1.78
CBWD3-202ENST00000377342 DBNDD2Q9BQY9 259 aa26.19■■□□□ 1.78
CBWD3-202ENST00000377342 CCDC8Q9H0W5 538 aaPredicted RBP26.19■■□□□ 1.78
CBWD3-202ENST00000377342 GGA1Q9UJY5 639 aa26.19■■□□□ 1.78
CBWD3-202ENST00000377342 LEMD3Q9Y2U8 911 aa26.19■■□□□ 1.78
CBWD3-202ENST00000377342 MYH13Q9UKX3 1938 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms