RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MCM9Q9NXL9 1143 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 PRAG1Q86YV5 1406 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 TBC1D2Q9BYX2 928 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 UNC13AQ9UPW8 1703 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 KIAA0754O94854 1291 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 TCEANC2Q96MN5 208 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 TMX1Q9H3N1 280 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 CCNL1Q9UK58 526 aaPredicted RBP15.64■□□□□ 0.09
GPC6-201ENST00000377047 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 NUP160Q12769 1436 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 KANK3Q6NY19 840 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 LINS1Q8NG48 757 aa15.64■□□□□ 0.09
GPC6-201ENST00000377047 GNAQP50148 359 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 PDE1AP54750 535 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 STX1AQ16623 288 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 IP6K1Q92551 441 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 GOPCQ9HD26 462 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 GJA3Q9Y6H8 435 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 LDHBP07195 334 aaKnown RBP15.63■□□□□ 0.09
GPC6-201ENST00000377047 KIF4BQ2VIQ3 1234 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 LUZP1Q86V48 1076 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 GSTTP1A0A1W2PQM5 241 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 CALM1P0DP23 149 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 CALM2P0DP24 149 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 CALM3P0DP25 149 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 TNPO1Q92973 898 aaKnown RBP15.63■□□□□ 0.09
GPC6-201ENST00000377047 CCDC113Q9H0I3 377 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 SBNO2Q9Y2G9 1366 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 PLCG2P16885 1265 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 RBM25P49756 843 aaKnown RBP15.63■□□□□ 0.09
GPC6-201ENST00000377047 CCDC102BQ68D86 513 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 UHRF1BP1Q6BDS2 1440 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 Q6ZUG5 572 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 ANKRD44Q8N8A2 993 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 KIAA0556O60303 1618 aa15.63■□□□□ 0.09
GPC6-201ENST00000377047 TFCP2Q12800 502 aa15.62■□□□□ 0.09
GPC6-201ENST00000377047 NMIQ13287 307 aaPredicted RBP15.62■□□□□ 0.09
GPC6-201ENST00000377047 PTPN14Q15678 1187 aa15.62■□□□□ 0.09
GPC6-201ENST00000377047 EIF2AK4Q9P2K8 1649 aaKnown RBP15.62■□□□□ 0.09
GPC6-201ENST00000377047 UBXN4Q92575 508 aa15.62■□□□□ 0.09
GPC6-201ENST00000377047 CNBD1Q8NA66 436 aa15.62■□□□□ 0.09
GPC6-201ENST00000377047 UQCRHLA0A096LP55 91 aa15.62■□□□□ 0.09
GPC6-201ENST00000377047 UQCRHP07919 91 aa15.62■□□□□ 0.09
GPC6-201ENST00000377047 STAT6P42226 847 aa15.62■□□□□ 0.09
GPC6-201ENST00000377047 GNAT2P19087 354 aa15.61■□□□□ 0.09
GPC6-201ENST00000377047 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
GPC6-201ENST00000377047 HDAC1Q13547 482 aaPredicted RBP15.61■□□□□ 0.09
GPC6-201ENST00000377047 KRT24Q2M2I5 525 aa15.61■□□□□ 0.09
GPC6-201ENST00000377047 AFMP43652 599 aa15.61■□□□□ 0.09
GPC6-201ENST00000377047 TMCO5BA8MYB1 307 aa15.61■□□□□ 0.09
GPC6-201ENST00000377047 TMC6Q7Z403 805 aa15.61■□□□□ 0.09
GPC6-201ENST00000377047 YTHDC2Q9H6S0 1430 aaKnown RBP15.61■□□□□ 0.09
GPC6-201ENST00000377047 RNF113AO15541 343 aaKnown RBP15.61■□□□□ 0.09
GPC6-201ENST00000377047 ZSCAN16Q9H4T2 348 aaPredicted RBP15.61■□□□□ 0.09
GPC6-201ENST00000377047 RRP36Q96EU6 259 aaKnown RBP15.6■□□□□ 0.09
GPC6-201ENST00000377047 GOLGA6L7A0A1B0GV03 622 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 ESYT1Q9BSJ8 1104 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 URI1O94763 535 aaPredicted RBP15.6■□□□□ 0.09
GPC6-201ENST00000377047 BICC1Q9H694 974 aaKnown RBP15.6■□□□□ 0.09
GPC6-201ENST00000377047 HOOK3Q86VS8 718 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 RMND1Q9NWS8 449 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 PTPRKQ15262 1439 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 SPDYE3A6NKU9 549 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 SYKP43405 635 aa15.6■□□□□ 0.09
GPC6-201ENST00000377047 FAM98CQ17RN3 349 aaKnown RBP15.6■□□□□ 0.09
GPC6-201ENST00000377047 CDCA7Q9BWT1 371 aaPredicted RBP15.6■□□□□ 0.09
GPC6-201ENST00000377047 NOP2P46087 812 aaKnown RBP15.59■□□□□ 0.09
GPC6-201ENST00000377047 CRACR2AQ9BSW2 395 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 MAP3K19Q56UN5 1328 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 TNNI2P48788 182 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 RRAGBQ5VZM2 374 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 DYDC1Q8WWB3 177 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 C6orf50Q9HD87 102 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 RTL9Q8NET4 1388 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 PAFAH1B1P43034 410 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 PRPF4BQ13523 1007 aaKnown RBP15.59■□□□□ 0.09
GPC6-201ENST00000377047 CCDC91Q7Z6B0 441 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 TSPYL6Q8N831 410 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 PHACTR2O75167 634 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 DHX37Q8IY37 1157 aaKnown RBP15.59■□□□□ 0.09
GPC6-201ENST00000377047 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 ADAMTS12P58397 1594 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 B4DLN1 442 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 UFL1O94874 794 aa15.59■□□□□ 0.09
GPC6-201ENST00000377047 MRPL12P52815 198 aaKnown RBP15.59■□□□□ 0.09
GPC6-201ENST00000377047 KIF2AO00139 706 aaPredicted RBP15.58■□□□□ 0.09
GPC6-201ENST00000377047 TMX3Q96JJ7 454 aa15.58■□□□□ 0.09
GPC6-201ENST00000377047 ALS2CR12Q96Q35 445 aa15.58■□□□□ 0.09
GPC6-201ENST00000377047 USP25Q9UHP3 1055 aa15.58■□□□□ 0.09
GPC6-201ENST00000377047 ZFYVE9O95405 1425 aa15.58■□□□□ 0.09
GPC6-201ENST00000377047 CHST3Q7LGC8 479 aa15.58■□□□□ 0.08
GPC6-201ENST00000377047 ORAI2Q96SN7 254 aa15.58■□□□□ 0.08
GPC6-201ENST00000377047 SAP30BPQ9UHR5 308 aaKnown RBP15.58■□□□□ 0.08
GPC6-201ENST00000377047 TRMT1Q9NXH9 659 aaKnown RBP15.58■□□□□ 0.08
GPC6-201ENST00000377047 BMP15O95972 392 aa15.58■□□□□ 0.08
GPC6-201ENST00000377047 PLCD4Q9BRC7 762 aa15.58■□□□□ 0.08
GPC6-201ENST00000377047 SYNCQ9H7C4 482 aa15.58■□□□□ 0.08
GPC6-201ENST00000377047 CCDC66A2RUB6 948 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms