RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TRAF5O00463 557 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 PSMD14O00487 310 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 HIRAP54198 1017 aaPredicted RBP18.23■□□□□ 0.51
NELFE-201ENST00000375425 FLIIQ13045 1269 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 TTLL11Q8NHH1 800 aa18.23■□□□□ 0.51
NELFE-201ENST00000375425 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
NELFE-201ENST00000375425 RASSF10A6NK89 507 aa18.22■□□□□ 0.51
NELFE-201ENST00000375425 ECE2O60344 883 aa18.22■□□□□ 0.51
NELFE-201ENST00000375425 UFL1O94874 794 aa18.22■□□□□ 0.51
NELFE-201ENST00000375425 CTSWP56202 376 aa18.22■□□□□ 0.51
NELFE-201ENST00000375425 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
NELFE-201ENST00000375425 CST9Q5W186 159 aa18.22■□□□□ 0.51
NELFE-201ENST00000375425 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
NELFE-201ENST00000375425 PGAP2Q9UHJ9 254 aa18.22■□□□□ 0.51
NELFE-201ENST00000375425 GGA1Q9UJY5 639 aa18.22■□□□□ 0.51
NELFE-201ENST00000375425 LRRC37AA6NMS7 1700 aa18.21■□□□□ 0.51
NELFE-201ENST00000375425 H7C1W4 665 aa18.21■□□□□ 0.51
NELFE-201ENST00000375425 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
NELFE-201ENST00000375425 MICALL2Q8IY33 904 aa18.21■□□□□ 0.51
NELFE-201ENST00000375425 TRPM4Q8TD43 1214 aa18.21■□□□□ 0.51
NELFE-201ENST00000375425 DPF2Q92785 391 aa18.21■□□□□ 0.51
NELFE-201ENST00000375425 ZC3H15Q8WU90 426 aaKnown RBP18.2■□□□□ 0.5
NELFE-201ENST00000375425 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
NELFE-201ENST00000375425 GREM2Q9H772 168 aa18.2■□□□□ 0.5
NELFE-201ENST00000375425 G3V3G9 751 aa18.19■□□□□ 0.5
NELFE-201ENST00000375425 GCKRQ14397 625 aa18.19■□□□□ 0.5
NELFE-201ENST00000375425 DCAF8Q5TAQ9 597 aa18.19■□□□□ 0.5
NELFE-201ENST00000375425 UBE3BQ7Z3V4 1068 aa18.19■□□□□ 0.5
NELFE-201ENST00000375425 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
NELFE-201ENST00000375425 GLIS2Q9BZE0 524 aaPredicted RBP18.19■□□□□ 0.5
NELFE-201ENST00000375425 RTL9Q8NET4 1388 aa18.19■□□□□ 0.5
NELFE-201ENST00000375425 SAMD7Q7Z3H4 446 aa18.18■□□□□ 0.5
NELFE-201ENST00000375425 XDHP47989 1333 aa18.18■□□□□ 0.5
NELFE-201ENST00000375425 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
NELFE-201ENST00000375425 VIL1P09327 827 aaKnown RBP18.17■□□□□ 0.5
NELFE-201ENST00000375425 ATP2B4P23634 1241 aa18.17■□□□□ 0.5
NELFE-201ENST00000375425 RPS12P25398 132 aaKnown RBP18.17■□□□□ 0.5
NELFE-201ENST00000375425 CDC37L1Q7L3B6 337 aa18.17■□□□□ 0.5
NELFE-201ENST00000375425 LINS1Q8NG48 757 aa18.17■□□□□ 0.5
NELFE-201ENST00000375425 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
NELFE-201ENST00000375425 MINPP1Q9UNW1 487 aa18.17■□□□□ 0.5
NELFE-201ENST00000375425 WTIPA6NIX2 430 aaPredicted RBP18.16■□□□□ 0.5
NELFE-201ENST00000375425 EGFRP00533 1210 aa18.16■□□□□ 0.5
NELFE-201ENST00000375425 TBC1D10BQ4KMP7 808 aaPredicted RBP18.16■□□□□ 0.5
NELFE-201ENST00000375425 MYH16Q9H6N6 1097 aa18.16■□□□□ 0.5
NELFE-201ENST00000375425 FOXN1O15353 648 aa18.15■□□□□ 0.5
NELFE-201ENST00000375425 CELF2O95319 508 aaKnown RBP18.15■□□□□ 0.5
NELFE-201ENST00000375425 CASP7P55210 303 aa18.15■□□□□ 0.5
NELFE-201ENST00000375425 RBM26Q5T8P6 1007 aaKnown RBP18.15■□□□□ 0.5
NELFE-201ENST00000375425 PLA2G12BQ9BX93 195 aa18.15■□□□□ 0.5
NELFE-201ENST00000375425 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
NELFE-201ENST00000375425 USP48Q86UV5 1035 aa18.15■□□□□ 0.5
NELFE-201ENST00000375425 TNS4Q8IZW8 715 aa18.15■□□□□ 0.5
NELFE-201ENST00000375425 WBP1LQ9NX94 342 aa18.15■□□□□ 0.5
NELFE-201ENST00000375425 TLL2Q9Y6L7 1015 aa18.15■□□□□ 0.5
NELFE-201ENST00000375425 F6X3S4 739 aa18.14■□□□□ 0.49
NELFE-201ENST00000375425 CSF1RP07333 972 aa18.14■□□□□ 0.49
NELFE-201ENST00000375425 ITGA6P23229 1130 aa18.14■□□□□ 0.49
NELFE-201ENST00000375425 IGHMBP2P38935 993 aaKnown RBP18.14■□□□□ 0.49
NELFE-201ENST00000375425 CYP4F22Q6NT55 531 aa18.14■□□□□ 0.49
NELFE-201ENST00000375425 SAPCD2Q86UD0 394 aa18.14■□□□□ 0.49
NELFE-201ENST00000375425 AIDAQ96BJ3 306 aa18.14■□□□□ 0.49
NELFE-201ENST00000375425 ZNF408Q9H9D4 720 aa18.14■□□□□ 0.49
NELFE-201ENST00000375425 ECE1P42892 770 aa18.13■□□□□ 0.49
NELFE-201ENST00000375425 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
NELFE-201ENST00000375425 GRM1Q13255 1194 aa18.13■□□□□ 0.49
NELFE-201ENST00000375425 PODNQ7Z5L7 613 aa18.13■□□□□ 0.49
NELFE-201ENST00000375425 CAPNS2Q96L46 248 aa18.13■□□□□ 0.49
NELFE-201ENST00000375425 MAP2K1Q02750 393 aaPredicted RBP18.12■□□□□ 0.49
NELFE-201ENST00000375425 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
NELFE-201ENST00000375425 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
NELFE-201ENST00000375425 RSBN1LQ6PCB5 846 aaPredicted RBP18.12■□□□□ 0.49
NELFE-201ENST00000375425 DLK2Q6UY11 383 aa18.12■□□□□ 0.49
NELFE-201ENST00000375425 AGBL3Q8NEM8 1001 aa18.12■□□□□ 0.49
NELFE-201ENST00000375425 CTCFP49711 727 aaPredicted RBP18.11■□□□□ 0.49
NELFE-201ENST00000375425 MPHOSPH8Q99549 860 aa18.11■□□□□ 0.49
NELFE-201ENST00000375425 USP17L3A6NCW0 530 aa18.1■□□□□ 0.49
NELFE-201ENST00000375425 USP17L4A6NCW7 530 aa18.1■□□□□ 0.49
NELFE-201ENST00000375425 KIF4BQ2VIQ3 1234 aa18.1■□□□□ 0.49
NELFE-201ENST00000375425 USP17L1Q7RTZ2 530 aa18.1■□□□□ 0.49
NELFE-201ENST00000375425 KRT26Q7Z3Y9 468 aa18.1■□□□□ 0.49
NELFE-201ENST00000375425 DCPSQ96C86 337 aaKnown RBP18.1■□□□□ 0.49
NELFE-201ENST00000375425 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
NELFE-201ENST00000375425 GMLQ99445 158 aa18.09■□□□□ 0.49
NELFE-201ENST00000375425 ZNF521Q96K83 1311 aa18.09■□□□□ 0.49
NELFE-201ENST00000375425 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
NELFE-201ENST00000375425 ZNF280AP59817 542 aaPredicted RBP18.08■□□□□ 0.49
NELFE-201ENST00000375425 FOXO4P98177 505 aa18.08■□□□□ 0.49
NELFE-201ENST00000375425 TXNRD3Q86VQ6 643 aa18.08■□□□□ 0.49
NELFE-201ENST00000375425 ANKRD2Q9GZV1 360 aa18.08■□□□□ 0.49
NELFE-201ENST00000375425 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.49
NELFE-201ENST00000375425 ANKRD18BA2A2Z9 1011 aa18.07■□□□□ 0.48
NELFE-201ENST00000375425 ADM5C9JUS6 153 aa18.07■□□□□ 0.48
NELFE-201ENST00000375425 USP17L8P0C7I0 530 aa18.07■□□□□ 0.48
NELFE-201ENST00000375425 LBX1P52954 281 aa18.07■□□□□ 0.48
NELFE-201ENST00000375425 HHIPL1Q96JK4 782 aa18.07■□□□□ 0.48
NELFE-201ENST00000375425 COA1Q9GZY4 146 aa18.07■□□□□ 0.48
NELFE-201ENST00000375425 SCN9AQ15858 1988 aa18.07■□□□□ 0.48
NELFE-201ENST00000375425 ZNF804BA4D1E1 1349 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms