RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 NFKBIEO00221 500 aa18.72■□□□□ 0.59
HSPG2-201ENST00000374673 LDHAL6AQ6ZMR3 332 aa18.72■□□□□ 0.59
HSPG2-201ENST00000374673 PSMD1Q99460 953 aa18.72■□□□□ 0.59
HSPG2-201ENST00000374673 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
HSPG2-201ENST00000374673 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
HSPG2-201ENST00000374673 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
HSPG2-201ENST00000374673 FKBP4Q02790 459 aaKnown RBP eCLIP18.71■□□□□ 0.59
HSPG2-201ENST00000374673 POLA2Q14181 598 aa18.71■□□□□ 0.59
HSPG2-201ENST00000374673 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
HSPG2-201ENST00000374673 MPNDQ8N594 471 aa18.71■□□□□ 0.59
HSPG2-201ENST00000374673 KLHDC4Q8TBB5 520 aa18.71■□□□□ 0.59
HSPG2-201ENST00000374673 SSH3Q8TE77 659 aa18.71■□□□□ 0.59
HSPG2-201ENST00000374673 TAOK3Q9H2K8 898 aa18.71■□□□□ 0.59
HSPG2-201ENST00000374673 PODXL2Q9NZ53 605 aa18.71■□□□□ 0.59
HSPG2-201ENST00000374673 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
HSPG2-201ENST00000374673 GPSM2P81274 684 aa18.7■□□□□ 0.58
HSPG2-201ENST00000374673 DPP8Q6V1X1 898 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-201ENST00000374673 RTFDC1Q9BY42 306 aaPredicted RBP18.7■□□□□ 0.58
HSPG2-201ENST00000374673 PUS3Q9BZE2 481 aaKnown RBP18.7■□□□□ 0.58
HSPG2-201ENST00000374673 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
HSPG2-201ENST00000374673 XDHP47989 1333 aa18.7■□□□□ 0.58
HSPG2-201ENST00000374673 EYA2O00167 538 aa18.69■□□□□ 0.58
HSPG2-201ENST00000374673 RASSF7Q02833 373 aa18.69■□□□□ 0.58
HSPG2-201ENST00000374673 CHRNDQ07001 517 aa18.69■□□□□ 0.58
HSPG2-201ENST00000374673 AAMPQ13685 434 aa18.69■□□□□ 0.58
HSPG2-201ENST00000374673 ANKRD2Q9GZV1 360 aa18.69■□□□□ 0.58
HSPG2-201ENST00000374673 NSFL1CQ9UNZ2 370 aaKnown RBP18.69■□□□□ 0.58
HSPG2-201ENST00000374673 RIPOR2Q9Y4F9 1068 aa18.69■□□□□ 0.58
HSPG2-201ENST00000374673 CIAO1O76071 339 aa18.68■□□□□ 0.58
HSPG2-201ENST00000374673 LRRC24Q50LG9 513 aa18.68■□□□□ 0.58
HSPG2-201ENST00000374673 SUPT20HQ8NEM7 779 aa18.68■□□□□ 0.58
HSPG2-201ENST00000374673 ANKIB1Q9P2G1 1089 aa18.68■□□□□ 0.58
HSPG2-201ENST00000374673 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
HSPG2-201ENST00000374673 MROH5Q6ZUA9 1318 aa18.68■□□□□ 0.58
HSPG2-201ENST00000374673 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 ATP2B4P23634 1241 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 PRELPP51888 382 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 ATG9AQ7Z3C6 839 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 SIRT2Q8IXJ6 389 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 TBC1D16Q8TBP0 767 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 SIL1Q9H173 461 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 VPS33BQ9H267 617 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 POLLQ9UGP5 575 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 GGA1Q9UJY5 639 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 LEMD3Q9Y2U8 911 aa18.66■□□□□ 0.58
HSPG2-201ENST00000374673 GOLGB1Q14789 3259 aaKnown RBP18.65■□□□□ 0.58
HSPG2-201ENST00000374673 HMMRO75330 724 aa18.65■□□□□ 0.58
HSPG2-201ENST00000374673 LMNB1P20700 586 aa18.65■□□□□ 0.58
HSPG2-201ENST00000374673 IL15P40933 162 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-201ENST00000374673 VGLL2Q8N8G2 317 aa18.65■□□□□ 0.58
HSPG2-201ENST00000374673 UFL1O94874 794 aa18.64■□□□□ 0.57
HSPG2-201ENST00000374673 IARSP41252 1262 aaKnown RBP18.64■□□□□ 0.57
HSPG2-201ENST00000374673 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
HSPG2-201ENST00000374673 METTL24Q5JXM2 366 aa18.64■□□□□ 0.57
HSPG2-201ENST00000374673 EYA3Q99504 573 aa18.64■□□□□ 0.57
HSPG2-201ENST00000374673 ZNF277Q9NRM2 450 aaPredicted RBP18.64■□□□□ 0.57
HSPG2-201ENST00000374673 NOP58Q9Y2X3 529 aaKnown RBP18.64■□□□□ 0.57
HSPG2-201ENST00000374673 C6orf229H3BNL8 230 aa18.63■□□□□ 0.57
HSPG2-201ENST00000374673 TAF5LO75529 589 aa18.63■□□□□ 0.57
HSPG2-201ENST00000374673 KIAA2012Q0VF49 1180 aa18.63■□□□□ 0.57
HSPG2-201ENST00000374673 HELBQ8NG08 1087 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-201ENST00000374673 PCDHB15Q9Y5E8 787 aa18.63■□□□□ 0.57
HSPG2-201ENST00000374673 ZNF804BA4D1E1 1349 aa18.63■□□□□ 0.57
HSPG2-201ENST00000374673 MED23Q9ULK4 1368 aa18.63■□□□□ 0.57
HSPG2-201ENST00000374673 COL4A5P29400 1685 aa18.63■□□□□ 0.57
HSPG2-201ENST00000374673 SURF6O75683 361 aaKnown RBP18.62■□□□□ 0.57
HSPG2-201ENST00000374673 PDE8BO95263 885 aa18.62■□□□□ 0.57
HSPG2-201ENST00000374673 G3BP1Q13283 466 aaKnown RBP eCLIP18.62■□□□□ 0.57
HSPG2-201ENST00000374673 ARAP2Q8WZ64 1704 aa18.62■□□□□ 0.57
HSPG2-201ENST00000374673 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
HSPG2-201ENST00000374673 UBE4AQ14139 1066 aa18.61■□□□□ 0.57
HSPG2-201ENST00000374673 AOC3Q16853 763 aa18.61■□□□□ 0.57
HSPG2-201ENST00000374673 WASHC4Q2M389 1173 aa18.61■□□□□ 0.57
HSPG2-201ENST00000374673 C9orf131Q5VYM1 1079 aa18.61■□□□□ 0.57
HSPG2-201ENST00000374673 RNF181Q9P0P0 153 aa18.61■□□□□ 0.57
HSPG2-201ENST00000374673 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
HSPG2-201ENST00000374673 IRS2Q9Y4H2 1338 aa18.6■□□□□ 0.57
HSPG2-201ENST00000374673 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-201ENST00000374673 KCNJ4P48050 445 aa18.6■□□□□ 0.57
HSPG2-201ENST00000374673 C15orf52Q6ZUT6 534 aaKnown RBP18.6■□□□□ 0.57
HSPG2-201ENST00000374673 LARGE2Q8N3Y3 721 aa18.6■□□□□ 0.57
HSPG2-201ENST00000374673 GPR101Q96P66 508 aaPredicted RBP18.6■□□□□ 0.57
HSPG2-201ENST00000374673 ZC3H4Q9UPT8 1303 aaKnown RBP18.59■□□□□ 0.57
HSPG2-201ENST00000374673 SNAP23O00161 211 aa18.59■□□□□ 0.57
HSPG2-201ENST00000374673 FGFR2P21802 821 aa18.59■□□□□ 0.57
HSPG2-201ENST00000374673 PUM3Q15397 648 aaKnown RBP18.59■□□□□ 0.57
HSPG2-201ENST00000374673 HSP90AB4PQ58FF6 505 aa18.59■□□□□ 0.57
HSPG2-201ENST00000374673 ZC3H12CQ9C0D7 883 aaKnown RBP18.59■□□□□ 0.57
HSPG2-201ENST00000374673 PSME4Q14997 1843 aa18.58■□□□□ 0.57
HSPG2-201ENST00000374673 RIMBP2O15034 1052 aa18.58■□□□□ 0.56
HSPG2-201ENST00000374673 SASH1O94885 1247 aa18.58■□□□□ 0.56
HSPG2-201ENST00000374673 JDP2Q8WYK2 163 aa18.58■□□□□ 0.56
HSPG2-201ENST00000374673 EXOC6BQ9Y2D4 811 aa18.58■□□□□ 0.56
HSPG2-201ENST00000374673 KLRK1P26718 216 aa18.57■□□□□ 0.56
HSPG2-201ENST00000374673 TFCP2Q12800 502 aa18.57■□□□□ 0.56
HSPG2-201ENST00000374673 OS9Q13438 667 aaPredicted RBP18.57■□□□□ 0.56
HSPG2-201ENST00000374673 TXNRD3Q86VQ6 643 aa18.57■□□□□ 0.56
HSPG2-201ENST00000374673 ERC1Q8IUD2 1116 aa18.57■□□□□ 0.56
HSPG2-201ENST00000374673 NIM1KQ8IY84 436 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms