RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 ZNF408Q9H9D4 720 aa20.79■□□□□ 0.92
HDAC8-202ENST00000373556 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
HDAC8-202ENST00000373556 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
HDAC8-202ENST00000373556 SCN9AQ15858 1988 aa20.79■□□□□ 0.92
HDAC8-202ENST00000373556 MAP2K1Q02750 393 aaPredicted RBP20.78■□□□□ 0.92
HDAC8-202ENST00000373556 SAMD7Q7Z3H4 446 aa20.78■□□□□ 0.92
HDAC8-202ENST00000373556 ZC3H15Q8WU90 426 aaKnown RBP20.78■□□□□ 0.92
HDAC8-202ENST00000373556 ANKIB1Q9P2G1 1089 aa20.78■□□□□ 0.92
HDAC8-202ENST00000373556 PI4KAP2A4QPH2 592 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 UFL1O94874 794 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 EGFRP00533 1210 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 ECE1P42892 770 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 TBC1D10BQ4KMP7 808 aaPredicted RBP20.77■□□□□ 0.92
HDAC8-202ENST00000373556 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 WWC1Q8IX03 1113 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 PI4KAP1Q8N8J0 262 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 DPF2Q92785 391 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 CHMP4AQ9BY43 222 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 ZC3H12CQ9C0D7 883 aaKnown RBP20.77■□□□□ 0.92
HDAC8-202ENST00000373556 PODXL2Q9NZ53 605 aa20.77■□□□□ 0.92
HDAC8-202ENST00000373556 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
HDAC8-202ENST00000373556 IGKV5-2P06315 115 aa20.76■□□□□ 0.91
HDAC8-202ENST00000373556 HSPA8P11142 646 aaKnown RBP20.76■□□□□ 0.91
HDAC8-202ENST00000373556 DLK2Q6UY11 383 aa20.76■□□□□ 0.91
HDAC8-202ENST00000373556 CDC37L1Q7L3B6 337 aa20.76■□□□□ 0.91
HDAC8-202ENST00000373556 SAPCD2Q86UD0 394 aa20.76■□□□□ 0.91
HDAC8-202ENST00000373556 STK31Q9BXU1 1019 aa20.76■□□□□ 0.91
HDAC8-202ENST00000373556 POLR2AP24928 1970 aaKnown RBP20.76■□□□□ 0.91
HDAC8-202ENST00000373556 MYH3P11055 1940 aa20.75■□□□□ 0.91
HDAC8-202ENST00000373556 AOC2O75106 756 aa20.75■□□□□ 0.91
HDAC8-202ENST00000373556 CCDC27Q2M243 656 aa20.75■□□□□ 0.91
HDAC8-202ENST00000373556 TWISTNBQ3B726 338 aaPredicted RBP20.75■□□□□ 0.91
HDAC8-202ENST00000373556 RBM26Q5T8P6 1007 aaKnown RBP20.75■□□□□ 0.91
HDAC8-202ENST00000373556 G2E3Q7L622 706 aa20.75■□□□□ 0.91
HDAC8-202ENST00000373556 USP48Q86UV5 1035 aa20.75■□□□□ 0.91
HDAC8-202ENST00000373556 GGA1Q9UJY5 639 aa20.75■□□□□ 0.91
HDAC8-202ENST00000373556 G3V3G9 751 aa20.74■□□□□ 0.91
HDAC8-202ENST00000373556 RPS12P25398 132 aaKnown RBP20.74■□□□□ 0.91
HDAC8-202ENST00000373556 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
HDAC8-202ENST00000373556 DCAF8Q5TAQ9 597 aa20.74■□□□□ 0.91
HDAC8-202ENST00000373556 ANKRD18AQ8IVF6 992 aa20.74■□□□□ 0.91
HDAC8-202ENST00000373556 SLC4A2P04920 1241 aa20.72■□□□□ 0.91
HDAC8-202ENST00000373556 CTSWP56202 376 aa20.72■□□□□ 0.91
HDAC8-202ENST00000373556 NEXNQ0ZGT2 675 aa20.72■□□□□ 0.91
HDAC8-202ENST00000373556 MRS2Q9HD23 443 aa20.72■□□□□ 0.91
HDAC8-202ENST00000373556 PSME4Q14997 1843 aa20.71■□□□□ 0.91
HDAC8-202ENST00000373556 VIL1P09327 827 aaKnown RBP20.71■□□□□ 0.91
HDAC8-202ENST00000373556 BEGAINQ9BUH8 593 aa20.71■□□□□ 0.91
HDAC8-202ENST00000373556 XDHP47989 1333 aa20.71■□□□□ 0.91
HDAC8-202ENST00000373556 WTIPA6NIX2 430 aaPredicted RBP20.7■□□□□ 0.9
HDAC8-202ENST00000373556 NEURL1BA8MQ27 555 aa20.7■□□□□ 0.9
HDAC8-202ENST00000373556 KIF4BQ2VIQ3 1234 aa20.7■□□□□ 0.9
HDAC8-202ENST00000373556 KRT26Q7Z3Y9 468 aa20.7■□□□□ 0.9
HDAC8-202ENST00000373556 TTLL11Q8NHH1 800 aa20.7■□□□□ 0.9
HDAC8-202ENST00000373556 GREM2Q9H772 168 aa20.7■□□□□ 0.9
HDAC8-202ENST00000373556 SALL2Q9Y467 1007 aaPredicted RBP20.7■□□□□ 0.9
HDAC8-202ENST00000373556 IL16Q14005 1332 aa20.7■□□□□ 0.9
HDAC8-202ENST00000373556 ADM5C9JUS6 153 aa20.69■□□□□ 0.9
HDAC8-202ENST00000373556 MAP2K2P36507 400 aa20.69■□□□□ 0.9
HDAC8-202ENST00000373556 UBE3BQ7Z3V4 1068 aa20.69■□□□□ 0.9
HDAC8-202ENST00000373556 HHIPL1Q96JK4 782 aa20.69■□□□□ 0.9
HDAC8-202ENST00000373556 CDC5LQ99459 802 aaKnown RBP20.69■□□□□ 0.9
HDAC8-202ENST00000373556 TSKSQ9UJT2 592 aa20.69■□□□□ 0.9
HDAC8-202ENST00000373556 ATP2B4P23634 1241 aa20.68■□□□□ 0.9
HDAC8-202ENST00000373556 DCPSQ96C86 337 aaKnown RBP20.68■□□□□ 0.9
HDAC8-202ENST00000373556 ASTN2O75129 1339 aaPredicted RBP20.68■□□□□ 0.9
HDAC8-202ENST00000373556 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
HDAC8-202ENST00000373556 HUNKP57058 714 aa20.67■□□□□ 0.9
HDAC8-202ENST00000373556 FLIIQ13045 1269 aa20.67■□□□□ 0.9
HDAC8-202ENST00000373556 RSBN1LQ6PCB5 846 aaPredicted RBP20.67■□□□□ 0.9
HDAC8-202ENST00000373556 GGA3Q9NZ52 723 aa20.67■□□□□ 0.9
HDAC8-202ENST00000373556 MINPP1Q9UNW1 487 aa20.67■□□□□ 0.9
HDAC8-202ENST00000373556 H7C1W4 665 aa20.66■□□□□ 0.9
HDAC8-202ENST00000373556 BSDC1Q9NW68 430 aaPredicted RBP20.66■□□□□ 0.9
HDAC8-202ENST00000373556 ANP32CO43423 234 aa20.65■□□□□ 0.9
HDAC8-202ENST00000373556 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
HDAC8-202ENST00000373556 GCKRQ14397 625 aa20.65■□□□□ 0.9
HDAC8-202ENST00000373556 AGBL3Q8NEM8 1001 aa20.65■□□□□ 0.9
HDAC8-202ENST00000373556 ZIC5Q96T25 663 aa20.65■□□□□ 0.9
HDAC8-202ENST00000373556 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
HDAC8-202ENST00000373556 ZNF609O15014 1411 aa20.64■□□□□ 0.89
HDAC8-202ENST00000373556 NCBP3Q53F19 620 aaKnown RBP20.64■□□□□ 0.89
HDAC8-202ENST00000373556 GBA2Q9HCG7 927 aaPredicted RBP20.64■□□□□ 0.89
HDAC8-202ENST00000373556 MED23Q9ULK4 1368 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 ZNF646O15015 1829 aaPredicted RBP20.63■□□□□ 0.89
HDAC8-202ENST00000373556 USP17L3A6NCW0 530 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 USP17L4A6NCW7 530 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 CCT4P50991 539 aaKnown RBP20.63■□□□□ 0.89
HDAC8-202ENST00000373556 BRPF1P55201 1214 aaPredicted RBP20.63■□□□□ 0.89
HDAC8-202ENST00000373556 ZNF280AP59817 542 aaPredicted RBP20.63■□□□□ 0.89
HDAC8-202ENST00000373556 EXOSC9Q06265 439 aaKnown RBP20.63■□□□□ 0.89
HDAC8-202ENST00000373556 SCARF1Q14162 830 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 USP17L1Q7RTZ2 530 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 PODNQ7Z5L7 613 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 SULF1Q8IWU6 871 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 GMLQ99445 158 aa20.63■□□□□ 0.89
HDAC8-202ENST00000373556 VAMP4O75379 141 aa20.62■□□□□ 0.89
HDAC8-202ENST00000373556 USP17L8P0C7I0 530 aa20.62■□□□□ 0.89
HDAC8-202ENST00000373556 IGHMBP2P38935 993 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms