RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 GIMAP6Q6P9H5 292 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 GIGYF2Q6Y7W6 1299 aaKnown RBP7.69□□□□□ -1.18
CHD6-202ENST00000373222 RUFY3Q7L099 469 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 MPNDQ8N594 471 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 KCNH5Q8NCM2 988 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 FAM227BQ96M60 508 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 NLRP2Q9NX02 1062 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 RIPOR2Q9Y4F9 1068 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 RAD50Q92878 1312 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 CSB-PGBD3P0DP91 1061 aa7.69□□□□□ -1.18
CHD6-202ENST00000373222 EAF2Q96CJ1 260 aaPredicted RBP7.69□□□□□ -1.18
CHD6-202ENST00000373222 PPP1R1BQ9UD71 204 aaPredicted RBP7.69□□□□□ -1.18
CHD6-202ENST00000373222 RPAP1Q9BWH6 1393 aaPredicted RBP7.69□□□□□ -1.18
CHD6-202ENST00000373222 CRYBG1Q9Y4K1 1723 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 KDM6AO15550 1401 aaPredicted RBP7.68□□□□□ -1.18
CHD6-202ENST00000373222 ZNF16P17020 682 aaPredicted RBP7.68□□□□□ -1.18
CHD6-202ENST00000373222 CASTP20810 708 aaKnown RBP7.68□□□□□ -1.18
CHD6-202ENST00000373222 KSR2Q6VAB6 950 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 AACSQ86V21 672 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 C8orf37Q96NL8 207 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 BABAM1Q9NWV8 329 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 USP16Q9Y5T5 823 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 PHRF1Q9P1Y6 1649 aaKnown RBP7.68□□□□□ -1.18
CHD6-202ENST00000373222 ZNF142P52746 1687 aaPredicted RBP7.68□□□□□ -1.18
CHD6-202ENST00000373222 HEG1Q9ULI3 1381 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 KAT6BQ8WYB5 2073 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 MCCP23508 829 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 PSEN1P49768 467 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 SLFNL1Q499Z3 407 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 PRPF40BQ6NWY9 871 aaKnown RBP7.68□□□□□ -1.18
CHD6-202ENST00000373222 ZNF496Q96IT1 587 aaPredicted RBP7.68□□□□□ -1.18
CHD6-202ENST00000373222 TTC14Q96N46 770 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 MEGF6O75095 1541 aa7.68□□□□□ -1.18
CHD6-202ENST00000373222 NPHP4O75161 1426 aaPredicted RBP7.67□□□□□ -1.18
CHD6-202ENST00000373222 SCN11AQ9UI33 1791 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 SLIT3O75094 1523 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 ATP5J2-PTCD1G3V325 749 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 PTCD1O75127 700 aaKnown RBP7.67□□□□□ -1.18
CHD6-202ENST00000373222 RAB11FIP3O75154 756 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 CLCN1P35523 988 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 ST3GAL1Q11201 340 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 CNTROBQ8N137 903 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 NECAB1Q8N987 351 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 XAGE3Q8WTP9 111 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 NAP1L5Q96NT1 182 aaPredicted RBP7.67□□□□□ -1.18
CHD6-202ENST00000373222 BOLA2Q9H3K6 86 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 CNPY2Q9Y2B0 182 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 AFDNP55196 1824 aaKnown RBP7.67□□□□□ -1.18
CHD6-202ENST00000373222 A0A0D9SFI3 127 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 GRM8O00222 908 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 ZNF445P59923 1031 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 ZNF790Q6PG37 636 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 DNAJC14Q6Y2X3 702 aaPredicted RBP7.67□□□□□ -1.18
CHD6-202ENST00000373222 COPS6Q7L5N1 327 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 CLASRPQ8N2M8 674 aaKnown RBP7.67□□□□□ -1.18
CHD6-202ENST00000373222 TRIM44Q96DX7 344 aaPredicted RBP7.67□□□□□ -1.18
CHD6-202ENST00000373222 MYD88Q99836 296 aa7.67□□□□□ -1.18
CHD6-202ENST00000373222 STRCP1A6NGW2 1772 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 HOXB7P09629 217 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 IFIT2P09913 472 aaKnown RBP7.66□□□□□ -1.18
CHD6-202ENST00000373222 FECHP22830 423 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 ANAPC15P60006 121 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 AMOTQ4VCS5 1084 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 NOM1Q5C9Z4 860 aaKnown RBP7.66□□□□□ -1.18
CHD6-202ENST00000373222 RIC3Q7Z5B4 369 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 USP48Q86UV5 1035 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 CCDC83Q8IWF9 413 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 JAKMIP1Q96N16 626 aaKnown RBP7.66□□□□□ -1.18
CHD6-202ENST00000373222 DIAPH3Q9NSV4 1193 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 AOX1Q06278 1338 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 NCAPD2Q15021 1401 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 A0A0U1RQG5 324 aaPredicted RBP7.66□□□□□ -1.18
CHD6-202ENST00000373222 CYP27B1O15528 508 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 NMIQ13287 307 aaPredicted RBP7.66□□□□□ -1.18
CHD6-202ENST00000373222 MTX1Q13505 466 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 TSR1Q2NL82 804 aaKnown RBP7.66□□□□□ -1.18
CHD6-202ENST00000373222 FAM173BQ6P4H8 233 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 ZNF589Q86UQ0 364 aaPredicted RBP7.66□□□□□ -1.18
CHD6-202ENST00000373222 ECHDC1Q9NTX5 307 aa7.66□□□□□ -1.18
CHD6-202ENST00000373222 C1orf167Q5SNV9 1468 aa7.65□□□□□ -1.18
CHD6-202ENST00000373222 NPHP3Q7Z494 1330 aa7.65□□□□□ -1.18
CHD6-202ENST00000373222 GOLGB1Q14789 3259 aaKnown RBP7.65□□□□□ -1.18
CHD6-202ENST00000373222 ALS2Q96Q42 1657 aa7.65□□□□□ -1.18
CHD6-202ENST00000373222 CAMTA1Q9Y6Y1 1673 aa7.65□□□□□ -1.18
CHD6-202ENST00000373222 SYT1P21579 422 aa7.65□□□□□ -1.18
CHD6-202ENST00000373222 LINS1Q8NG48 757 aa7.65□□□□□ -1.18
CHD6-202ENST00000373222 DDX21Q9NR30 783 aaKnown RBP eCLIP7.65□□□□□ -1.18
CHD6-202ENST00000373222 ADAMTSL3P82987 1691 aa7.65□□□□□ -1.19
CHD6-202ENST00000373222 NEURL1BA8MQ27 555 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 GLRX3O76003 335 aaKnown RBP7.64□□□□□ -1.19
CHD6-202ENST00000373222 RAPGEF4Q8WZA2 1011 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 UBXN4Q92575 508 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 DDX27Q96GQ7 796 aaKnown RBP7.64□□□□□ -1.19
CHD6-202ENST00000373222 PPP1R9BQ96SB3 815 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 SEC62Q99442 399 aaKnown RBP7.64□□□□□ -1.19
CHD6-202ENST00000373222 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 SLC52A2Q9HAB3 445 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 HYPKQ9NX55 129 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 COL15A1P39059 1388 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 FIBPO43427 364 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms