RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 USP44Q9H0E7 712 aa25.3■■□□□ 1.64
TMEM53-205ENST00000372244 GGA1Q9UJY5 639 aa25.3■■□□□ 1.64
TMEM53-205ENST00000372244 XDHP47989 1333 aa25.29■■□□□ 1.64
TMEM53-205ENST00000372244 IGHMBP2P38935 993 aaKnown RBP25.29■■□□□ 1.64
TMEM53-205ENST00000372244 LTBP1Q14766 1721 aa25.29■■□□□ 1.64
TMEM53-205ENST00000372244 ANKRD18BA2A2Z9 1011 aa25.28■■□□□ 1.64
TMEM53-205ENST00000372244 YDJCA8MPS7 323 aa25.28■■□□□ 1.64
TMEM53-205ENST00000372244 IFIT5Q13325 482 aaKnown RBP25.28■■□□□ 1.64
TMEM53-205ENST00000372244 SUCLG2Q96I99 432 aa25.28■■□□□ 1.64
TMEM53-205ENST00000372244 TAF1DQ9H5J8 278 aaPredicted RBP25.28■■□□□ 1.64
TMEM53-205ENST00000372244 RIMBP2O15034 1052 aa25.28■■□□□ 1.64
TMEM53-205ENST00000372244 UFL1O94874 794 aa25.28■■□□□ 1.64
TMEM53-205ENST00000372244 API5Q9BZZ5 524 aaKnown RBP25.28■■□□□ 1.64
TMEM53-205ENST00000372244 HACL1Q9UJ83 578 aa25.28■■□□□ 1.64
TMEM53-205ENST00000372244 GJA3Q9Y6H8 435 aa25.28■■□□□ 1.64
TMEM53-205ENST00000372244 WTIPA6NIX2 430 aaPredicted RBP25.27■■□□□ 1.64
TMEM53-205ENST00000372244 HSPA6P17066 643 aa25.27■■□□□ 1.64
TMEM53-205ENST00000372244 ATP2B4P23634 1241 aa25.27■■□□□ 1.64
TMEM53-205ENST00000372244 SMC1BQ8NDV3 1235 aa25.27■■□□□ 1.64
TMEM53-205ENST00000372244 GPR101Q96P66 508 aaPredicted RBP25.27■■□□□ 1.64
TMEM53-205ENST00000372244 MPHOSPH8Q99549 860 aa25.27■■□□□ 1.64
TMEM53-205ENST00000372244 ZC3H12CQ9C0D7 883 aaKnown RBP25.27■■□□□ 1.64
TMEM53-205ENST00000372244 CCT4P50991 539 aaKnown RBP25.26■■□□□ 1.63
TMEM53-205ENST00000372244 SCNN1DP51172 638 aa25.25■■□□□ 1.63
TMEM53-205ENST00000372244 RABL6Q3YEC7 729 aaPredicted RBP25.25■■□□□ 1.63
TMEM53-205ENST00000372244 BCAR3O75815 825 aa25.24■■□□□ 1.63
TMEM53-205ENST00000372244 TNIP1Q15025 636 aa25.24■■□□□ 1.63
TMEM53-205ENST00000372244 CCDC57Q2TAC2 916 aa25.24■■□□□ 1.63
TMEM53-205ENST00000372244 CIAPIN1Q6FI81 312 aa25.24■■□□□ 1.63
TMEM53-205ENST00000372244 DBNDD1Q9H9R9 158 aa25.24■■□□□ 1.63
TMEM53-205ENST00000372244 KIF16BQ96L93 1317 aa25.24■■□□□ 1.63
TMEM53-205ENST00000372244 RAD17O75943 681 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 POTEIP0CG38 1075 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 POTEJP0CG39 1038 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 EPHX2P34913 555 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 DOK7Q18PE1 504 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 ANKRD2Q9GZV1 360 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 CHMP3Q9Y3E7 222 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 SCN4AP35499 1836 aa25.23■■□□□ 1.63
TMEM53-205ENST00000372244 BICC1Q9H694 974 aaKnown RBP25.22■■□□□ 1.63
TMEM53-205ENST00000372244 KCNQ5Q9NR82 932 aa25.22■■□□□ 1.63
TMEM53-205ENST00000372244 LEMD3Q9Y2U8 911 aa25.22■■□□□ 1.63
TMEM53-205ENST00000372244 IPO8O15397 1037 aaKnown RBP25.21■■□□□ 1.63
TMEM53-205ENST00000372244 ECE2O60344 883 aa25.21■■□□□ 1.63
TMEM53-205ENST00000372244 EPS15P42566 896 aa25.21■■□□□ 1.63
TMEM53-205ENST00000372244 PNMA8AQ86V59 439 aaPredicted RBP25.21■■□□□ 1.63
TMEM53-205ENST00000372244 ANKRD44Q8N8A2 993 aa25.21■■□□□ 1.63
TMEM53-205ENST00000372244 CEP350Q5VT06 3117 aa25.21■■□□□ 1.63
TMEM53-205ENST00000372244 CHRNDQ07001 517 aa25.21■■□□□ 1.63
TMEM53-205ENST00000372244 ZNF594Q96JF6 807 aaPredicted RBP25.21■■□□□ 1.63
TMEM53-205ENST00000372244 GPRC5DQ9NZD1 345 aa25.21■■□□□ 1.63
TMEM53-205ENST00000372244 INTS3Q68E01 1043 aaKnown RBP25.2■■□□□ 1.62
TMEM53-205ENST00000372244 CHADLQ6NUI6 762 aa25.2■■□□□ 1.62
TMEM53-205ENST00000372244 LDHDQ86WU2 507 aa25.2■■□□□ 1.62
TMEM53-205ENST00000372244 LMOD1P29536 600 aaPredicted RBP25.19■■□□□ 1.62
TMEM53-205ENST00000372244 GMPSP49915 693 aaPredicted RBP25.19■■□□□ 1.62
TMEM53-205ENST00000372244 LDHAL6AQ6ZMR3 332 aa25.19■■□□□ 1.62
TMEM53-205ENST00000372244 PSMD14O00487 310 aa25.18■■□□□ 1.62
TMEM53-205ENST00000372244 TRIM27P14373 513 aa25.18■■□□□ 1.62
TMEM53-205ENST00000372244 ATF7IPQ6VMQ6 1270 aa25.17■■□□□ 1.62
TMEM53-205ENST00000372244 ZNF804BA4D1E1 1349 aa25.17■■□□□ 1.62
TMEM53-205ENST00000372244 MED23Q9ULK4 1368 aa25.17■■□□□ 1.62
TMEM53-205ENST00000372244 VIL1P09327 827 aaKnown RBP25.16■■□□□ 1.62
TMEM53-205ENST00000372244 APLP1P51693 650 aa25.16■■□□□ 1.62
TMEM53-205ENST00000372244 EAPPQ56P03 285 aaPredicted RBP25.16■■□□□ 1.62
TMEM53-205ENST00000372244 PODNQ7Z5L7 613 aa25.16■■□□□ 1.62
TMEM53-205ENST00000372244 TXNRD3Q86VQ6 643 aa25.16■■□□□ 1.62
TMEM53-205ENST00000372244 DPF2Q92785 391 aa25.16■■□□□ 1.62
TMEM53-205ENST00000372244 G3V3G9 751 aa25.15■■□□□ 1.62
TMEM53-205ENST00000372244 TAF7LQ5H9L4 462 aa25.15■■□□□ 1.62
TMEM53-205ENST00000372244 DCAF8Q5TAQ9 597 aa25.15■■□□□ 1.62
TMEM53-205ENST00000372244 USP50Q70EL3 339 aaPredicted RBP25.15■■□□□ 1.62
TMEM53-205ENST00000372244 FRAT1Q92837 279 aaPredicted RBP25.15■■□□□ 1.62
TMEM53-205ENST00000372244 TAF5LO75529 589 aa25.15■■□□□ 1.62
TMEM53-205ENST00000372244 HELBQ8NG08 1087 aaPredicted RBP25.15■■□□□ 1.62
TMEM53-205ENST00000372244 ZBTB12Q9Y330 459 aaPredicted RBP25.15■■□□□ 1.62
TMEM53-205ENST00000372244 RIPOR2Q9Y4F9 1068 aa25.15■■□□□ 1.62
TMEM53-205ENST00000372244 UBTFL1P0CB47 393 aaPredicted RBP25.14■■□□□ 1.61
TMEM53-205ENST00000372244 C15orf52Q6ZUT6 534 aaKnown RBP25.14■■□□□ 1.61
TMEM53-205ENST00000372244 PUS3Q9BZE2 481 aaKnown RBP25.14■■□□□ 1.61
TMEM53-205ENST00000372244 CNNM1Q9NRU3 951 aa25.14■■□□□ 1.61
TMEM53-205ENST00000372244 ADARB2Q9NS39 739 aaKnown RBP25.14■■□□□ 1.61
TMEM53-205ENST00000372244 CNOT7Q9UIV1 285 aaKnown RBP25.14■■□□□ 1.61
TMEM53-205ENST00000372244 IRS2Q9Y4H2 1338 aa25.14■■□□□ 1.61
TMEM53-205ENST00000372244 SNAP23O00161 211 aa25.13■■□□□ 1.61
TMEM53-205ENST00000372244 RPS12P25398 132 aaKnown RBP25.13■■□□□ 1.61
TMEM53-205ENST00000372244 COA1Q9GZY4 146 aa25.13■■□□□ 1.61
TMEM53-205ENST00000372244 TNNQ9UQP3 1299 aa25.13■■□□□ 1.61
TMEM53-205ENST00000372244 SPEF2Q9C093 1822 aa25.12■■□□□ 1.61
TMEM53-205ENST00000372244 ITGBL1O95965 494 aaPredicted RBP25.12■■□□□ 1.61
TMEM53-205ENST00000372244 KLRK1P26718 216 aa25.12■■□□□ 1.61
TMEM53-205ENST00000372244 ZKSCAN2Q63HK3 967 aa25.12■■□□□ 1.61
TMEM53-205ENST00000372244 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
TMEM53-205ENST00000372244 MEIS3Q99687 375 aa25.11■■□□□ 1.61
TMEM53-205ENST00000372244 CLEC11AQ9Y240 323 aa25.11■■□□□ 1.61
TMEM53-205ENST00000372244 KCNJ4P48050 445 aa25.1■■□□□ 1.61
TMEM53-205ENST00000372244 RFX5P48382 616 aaPredicted RBP25.1■■□□□ 1.61
TMEM53-205ENST00000372244 SCN9AQ15858 1988 aa25.1■■□□□ 1.61
TMEM53-205ENST00000372244 ADAMTSL1Q8N6G6 1762 aa25.1■■□□□ 1.61
TMEM53-205ENST00000372244 SHTN1A0MZ66 631 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms