RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 VGLL2Q8N8G2 317 aa31.96■■■□□ 2.71
ATPAF1-202ENST00000371937 ATP2B3Q16720 1220 aa31.96■■■□□ 2.71
ATPAF1-202ENST00000371937 CNBD1Q8NA66 436 aa31.96■■■□□ 2.71
ATPAF1-202ENST00000371937 C3orf67Q6ZVT6 689 aa31.95■■■□□ 2.7
ATPAF1-202ENST00000371937 CCDC158Q5M9N0 1113 aa31.94■■■□□ 2.7
ATPAF1-202ENST00000371937 GORABQ5T7V8 394 aa31.94■■■□□ 2.7
ATPAF1-202ENST00000371937 HAUS7Q99871 368 aa31.94■■■□□ 2.7
ATPAF1-202ENST00000371937 HIP1O00291 1037 aa31.93■■■□□ 2.7
ATPAF1-202ENST00000371937 TM4SF1P30408 202 aa31.93■■■□□ 2.7
ATPAF1-202ENST00000371937 ANKRD18AQ8IVF6 992 aa31.93■■■□□ 2.7
ATPAF1-202ENST00000371937 XAGE2Q96GT9 111 aa31.93■■■□□ 2.7
ATPAF1-202ENST00000371937 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.93■■■□□ 2.7
ATPAF1-202ENST00000371937 USP26Q9BXU7 913 aa31.93■■■□□ 2.7
ATPAF1-202ENST00000371937 DIAPH3Q9NSV4 1193 aa31.92■■■□□ 2.7
ATPAF1-202ENST00000371937 PUM3Q15397 648 aaKnown RBP31.91■■■□□ 2.7
ATPAF1-202ENST00000371937 RUFY2Q8WXA3 655 aa31.91■■■□□ 2.7
ATPAF1-202ENST00000371937 COL23A1Q86Y22 540 aaPredicted RBP31.89■■■□□ 2.7
ATPAF1-202ENST00000371937 NLGN1Q8N2Q7 840 aa31.89■■■□□ 2.7
ATPAF1-202ENST00000371937 LPIN2Q92539 896 aa31.89■■■□□ 2.7
ATPAF1-202ENST00000371937 CAMKK2Q96RR4 588 aa31.89■■■□□ 2.7
ATPAF1-202ENST00000371937 FSD1Q9BTV5 496 aa31.89■■■□□ 2.7
ATPAF1-202ENST00000371937 BSDC1Q9NW68 430 aaPredicted RBP31.89■■■□□ 2.7
ATPAF1-202ENST00000371937 CASZ1Q86V15 1759 aa31.89■■■□□ 2.7
ATPAF1-202ENST00000371937 SERPINB2P05120 415 aa31.89■■■□□ 2.69
ATPAF1-202ENST00000371937 TTC39AQ5SRH9 613 aa31.89■■■□□ 2.69
ATPAF1-202ENST00000371937 DNAJC2Q99543 621 aaKnown RBP31.89■■■□□ 2.69
ATPAF1-202ENST00000371937 MSH5O43196 834 aa31.88■■■□□ 2.69
ATPAF1-202ENST00000371937 IFIT1P09914 478 aaKnown RBP31.88■■■□□ 2.69
ATPAF1-202ENST00000371937 ADORA1P30542 326 aa31.88■■■□□ 2.69
ATPAF1-202ENST00000371937 ST5P78524 1137 aa31.88■■■□□ 2.69
ATPAF1-202ENST00000371937 PRR5LQ6MZQ0 368 aa31.88■■■□□ 2.69
ATPAF1-202ENST00000371937 EPB41L2O43491 1005 aaKnown RBP31.87■■■□□ 2.69
ATPAF1-202ENST00000371937 TICAM2Q86XR7 235 aa31.87■■■□□ 2.69
ATPAF1-202ENST00000371937 CCDC24Q8N4L8 307 aa31.87■■■□□ 2.69
ATPAF1-202ENST00000371937 SGSM2O43147 1006 aa31.86■■■□□ 2.69
ATPAF1-202ENST00000371937 FGFR2P21802 821 aa31.86■■■□□ 2.69
ATPAF1-202ENST00000371937 SF3B2Q13435 895 aaKnown RBP31.86■■■□□ 2.69
ATPAF1-202ENST00000371937 EN1Q05925 392 aaPredicted RBP31.86■■■□□ 2.69
ATPAF1-202ENST00000371937 CWC27Q6UX04 472 aaKnown RBP31.86■■■□□ 2.69
ATPAF1-202ENST00000371937 DDX46Q7L014 1031 aaKnown RBP31.86■■■□□ 2.69
ATPAF1-202ENST00000371937 HELBQ8NG08 1087 aaPredicted RBP31.86■■■□□ 2.69
ATPAF1-202ENST00000371937 RFX7Q2KHR2 1363 aa31.85■■■□□ 2.69
ATPAF1-202ENST00000371937 SLC5A1P13866 664 aa31.85■■■□□ 2.69
ATPAF1-202ENST00000371937 EZH2Q15910 746 aaKnown RBP31.85■■■□□ 2.69
ATPAF1-202ENST00000371937 SPEF2Q9C093 1822 aa31.85■■■□□ 2.69
ATPAF1-202ENST00000371937 RPS8P62241 208 aaKnown RBP31.84■■■□□ 2.69
ATPAF1-202ENST00000371937 CHRNDQ07001 517 aa31.84■■■□□ 2.69
ATPAF1-202ENST00000371937 ZNF512BQ96KM6 892 aaPredicted RBP31.84■■■□□ 2.69
ATPAF1-202ENST00000371937 ANO2Q9NQ90 1003 aa31.84■■■□□ 2.69
ATPAF1-202ENST00000371937 PAG1Q9NWQ8 432 aa31.84■■■□□ 2.69
ATPAF1-202ENST00000371937 POLRMTO00411 1230 aaKnown RBP31.84■■■□□ 2.69
ATPAF1-202ENST00000371937 DAXXQ9UER7 740 aaPredicted RBP31.84■■■□□ 2.69
ATPAF1-202ENST00000371937 CELF1Q92879 486 aaKnown RBP31.83■■■□□ 2.69
ATPAF1-202ENST00000371937 DDR1Q08345 913 aa31.82■■■□□ 2.68
ATPAF1-202ENST00000371937 EDC3Q96F86 508 aaKnown RBP31.82■■■□□ 2.68
ATPAF1-202ENST00000371937 PNPLA7Q6ZV29 1317 aa31.82■■■□□ 2.68
ATPAF1-202ENST00000371937 TAF5LO75529 589 aa31.82■■■□□ 2.68
ATPAF1-202ENST00000371937 BAG6P46379 1132 aa31.82■■■□□ 2.68
ATPAF1-202ENST00000371937 BECN1Q14457 450 aa31.82■■■□□ 2.68
ATPAF1-202ENST00000371937 KBTBD3Q8NAB2 608 aa31.82■■■□□ 2.68
ATPAF1-202ENST00000371937 KIAA1211Q6ZU35 1233 aa31.81■■■□□ 2.68
ATPAF1-202ENST00000371937 GOLIM4O00461 696 aa31.8■■■□□ 2.68
ATPAF1-202ENST00000371937 NDUFB9Q9Y6M9 179 aa31.8■■■□□ 2.68
ATPAF1-202ENST00000371937 TNRC6CQ9HCJ0 1690 aaKnown RBP31.8■■■□□ 2.68
ATPAF1-202ENST00000371937 RAD50Q92878 1312 aa31.8■■■□□ 2.68
ATPAF1-202ENST00000371937 MCCP23508 829 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 IL25Q9H293 177 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 STK32BQ9NY57 414 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 COL4A1P02462 1669 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 ARAP2Q8WZ64 1704 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 UQCRFS1P1P0C7P4 283 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 SLC15A2Q16348 729 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 MINPP1Q9UNW1 487 aa31.79■■■□□ 2.68
ATPAF1-202ENST00000371937 KIF2CQ99661 725 aa31.78■■■□□ 2.68
ATPAF1-202ENST00000371937 FKBP4Q02790 459 aaKnown RBP eCLIP31.77■■■□□ 2.68
ATPAF1-202ENST00000371937 NMIQ13287 307 aaPredicted RBP31.77■■■□□ 2.68
ATPAF1-202ENST00000371937 CCDC102BQ68D86 513 aa31.77■■■□□ 2.68
ATPAF1-202ENST00000371937 TAF1P21675 1872 aa31.77■■■□□ 2.68
ATPAF1-202ENST00000371937 CRY2Q49AN0 593 aa31.77■■■□□ 2.68
ATPAF1-202ENST00000371937 UBE4AQ14139 1066 aa31.76■■■□□ 2.67
ATPAF1-202ENST00000371937 LRRFIP1Q32MZ4 808 aaKnown RBP31.76■■■□□ 2.67
ATPAF1-202ENST00000371937 RPGRQ92834 1020 aaKnown RBP31.76■■■□□ 2.67
ATPAF1-202ENST00000371937 ANKRD2Q9GZV1 360 aa31.76■■■□□ 2.67
ATPAF1-202ENST00000371937 SNRKQ9NRH2 765 aa31.76■■■□□ 2.67
ATPAF1-202ENST00000371937 ARID4AP29374 1257 aaPredicted RBP31.75■■■□□ 2.67
ATPAF1-202ENST00000371937 GRAPQ13588 217 aa31.75■■■□□ 2.67
ATPAF1-202ENST00000371937 GRAPLQ8TC17 118 aaPredicted RBP31.75■■■□□ 2.67
ATPAF1-202ENST00000371937 FAM227BQ96M60 508 aa31.75■■■□□ 2.67
ATPAF1-202ENST00000371937 PHKA1P46020 1223 aa31.74■■■□□ 2.67
ATPAF1-202ENST00000371937 ANO8Q9HCE9 1232 aaPredicted RBP31.74■■■□□ 2.67
ATPAF1-202ENST00000371937 SCARF1Q14162 830 aa31.73■■■□□ 2.67
ATPAF1-202ENST00000371937 LSG1Q9H089 658 aaKnown RBP31.73■■■□□ 2.67
ATPAF1-202ENST00000371937 MCAMP43121 646 aa31.72■■■□□ 2.67
ATPAF1-202ENST00000371937 PARP3Q9Y6F1 533 aa31.72■■■□□ 2.67
ATPAF1-202ENST00000371937 A0A0D9SFI3 127 aa31.72■■■□□ 2.67
ATPAF1-202ENST00000371937 SNAP23O00161 211 aa31.72■■■□□ 2.67
ATPAF1-202ENST00000371937 RBM17Q96I25 401 aaKnown RBP31.72■■■□□ 2.67
ATPAF1-202ENST00000371937 KLRG2A4D1S0 409 aaPredicted RBP31.71■■■□□ 2.67
ATPAF1-202ENST00000371937 ZAP70P43403 619 aa31.71■■■□□ 2.67
ATPAF1-202ENST00000371937 ANAPC15P60006 121 aa31.71■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms