RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 NCAPHQ15003 741 aa5.69□□□□□ -1.5
SGIP1-204ENST00000371039 SARM1Q6SZW1 724 aa5.69□□□□□ -1.5
SGIP1-204ENST00000371039 ALDH8A1Q9H2A2 487 aaPredicted RBP5.69□□□□□ -1.5
SGIP1-204ENST00000371039 CHMP3Q9Y3E7 222 aa5.69□□□□□ -1.5
SGIP1-204ENST00000371039 LOC102724159A0A0B4J2E5 919 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 HSPA2P54652 639 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 EIF4A1P60842 406 aaKnown RBP5.68□□□□□ -1.5
SGIP1-204ENST00000371039 PWP2Q15269 919 aaKnown RBP5.68□□□□□ -1.5
SGIP1-204ENST00000371039 EPHA10Q5JZY3 1008 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 NBPF6Q5VWK0 638 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 TRIM65Q6PJ69 517 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 NBPF4Q96M43 638 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 JAKMIP1Q96N16 626 aaKnown RBP5.68□□□□□ -1.5
SGIP1-204ENST00000371039 FEZ1Q99689 392 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 ATG3Q9NT62 314 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 RBM8AQ9Y5S9 174 aaKnown RBP5.68□□□□□ -1.5
SGIP1-204ENST00000371039 SCN11AQ9UI33 1791 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 FLT4P35916 1363 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 NMIQ13287 307 aaPredicted RBP5.68□□□□□ -1.5
SGIP1-204ENST00000371039 TSGA10IPQ3SY00 556 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 TMEM139Q8IV31 216 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 CHPF2Q9P2E5 772 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 NUTM2FA1L443 756 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 CDC25BP30305 580 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 ELF2Q15723 593 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 CASC1Q6TDU7 716 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 KLHDC4Q8TBB5 520 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 UTYO14607 1347 aa5.68□□□□□ -1.5
SGIP1-204ENST00000371039 SLIT1O75093 1534 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 GIGYF1O75420 1035 aaPredicted RBP5.67□□□□□ -1.5
SGIP1-204ENST00000371039 SMARCC2Q8TAQ2 1214 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 EPC1Q9H2F5 836 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 PDRG1Q9NUG6 133 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 INTS13Q9NVM9 706 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 HMMRO75330 724 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 SURF6O75683 361 aaKnown RBP5.67□□□□□ -1.5
SGIP1-204ENST00000371039 TNNT1P13805 278 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 FDPSP14324 419 aaKnown RBP5.67□□□□□ -1.5
SGIP1-204ENST00000371039 CCAR2Q8N163 923 aaKnown RBP5.67□□□□□ -1.5
SGIP1-204ENST00000371039 USHBP1Q8N6Y0 703 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 TRPM3Q9HCF6 1732 aaPredicted RBP5.67□□□□□ -1.5
SGIP1-204ENST00000371039 GOLGB1Q14789 3259 aaKnown RBP5.67□□□□□ -1.5
SGIP1-204ENST00000371039 PI4KAP2A4QPH2 592 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 TAF5LO75529 589 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 HOXC9P31274 260 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 SCRN1Q12765 414 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 PI4KAP1Q8N8J0 262 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 SYAP1Q96A49 352 aaPredicted RBP5.67□□□□□ -1.5
SGIP1-204ENST00000371039 MED15Q96RN5 788 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 AKAP11Q9UKA4 1901 aa5.67□□□□□ -1.5
SGIP1-204ENST00000371039 TMEM2Q9UHN6 1383 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 IGKV5-2P06315 115 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 RPS6KB1P23443 525 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 MAP3K11Q16584 847 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 PTPN21Q16825 1174 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 CWF19L2Q2TBE0 894 aaKnown RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 REXO1L1PQ8IX06 675 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 PIAS4Q8N2W9 510 aaPredicted RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 SMC3Q9UQE7 1217 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 TTC41PQ6P2S7 1318 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 A0A0U1RQJ8 604 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 RFX5P48382 616 aaPredicted RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 TAF7Q15545 349 aaPredicted RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 DNTTIP2Q5QJE6 756 aaKnown RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 ATRIPQ8WXE1 791 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 TMX1Q9H3N1 280 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 CGNQ9P2M7 1197 aaKnown RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 LCMT1Q9UIC8 334 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 RAB11FIP3O75154 756 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 CCDC192P0DO97 292 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 CYP2C19P33261 490 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 GABPB1Q06547 395 aaPredicted RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.66□□□□□ -1.5
SGIP1-204ENST00000371039 GTF3C6Q969F1 213 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 SUCLG2Q96I99 432 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 AGXT2Q9BYV1 514 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 NUP62CLQ9H1M0 184 aa5.66□□□□□ -1.5
SGIP1-204ENST00000371039 PARP4Q9UKK3 1724 aaKnown RBP5.65□□□□□ -1.5
SGIP1-204ENST00000371039 CLCN6P51797 869 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 ST5P78524 1137 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 ERCC6LQ2NKX8 1250 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 CCDC129Q6ZRS4 1044 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 DPF2Q92785 391 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 MRFAP1L1Q96HT8 127 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 GJB4Q9NTQ9 266 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 ARHGAP23Q9P227 1491 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 MROH7-TTC4A0A0A0MT08 1334 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 VPS37CA5D8V6 355 aaPredicted RBP5.65□□□□□ -1.5
SGIP1-204ENST00000371039 PPFIA3O75145 1194 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 CYP21A2P08686 494 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 UBTFL1P0CB47 393 aaPredicted RBP5.65□□□□□ -1.5
SGIP1-204ENST00000371039 BMP6P22004 513 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 RINLQ6ZS11 566 aa5.65□□□□□ -1.5
SGIP1-204ENST00000371039 FMR1NBQ8N0W7 255 aaPredicted RBP5.65□□□□□ -1.5
SGIP1-204ENST00000371039 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.65□□□□□ -1.5
SGIP1-204ENST00000371039 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.65□□□□□ -1.5
SGIP1-204ENST00000371039 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.65□□□□□ -1.51
SGIP1-204ENST00000371039 NHSL1Q5SYE7 1610 aa5.65□□□□□ -1.51
SGIP1-204ENST00000371039 GNAT3A8MTJ3 354 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms