RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 HELBQ8NG08 1087 aaPredicted RBP12.9□□□□□ -0.34
CCNC-203ENST00000369220 SIL1Q9H173 461 aa12.9□□□□□ -0.34
CCNC-203ENST00000369220 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 MTX1Q13505 466 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 COL4A5P29400 1685 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 TAF5LO75529 589 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 CEP85Q6P2H3 762 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 DPP8Q6V1X1 898 aaPredicted RBP12.89□□□□□ -0.35
CCNC-203ENST00000369220 MPNDQ8N594 471 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 ANKIB1Q9P2G1 1089 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 POLLQ9UGP5 575 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 LTBP1Q14766 1721 aa12.89□□□□□ -0.35
CCNC-203ENST00000369220 FKBP4Q02790 459 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCNC-203ENST00000369220 CHRNDQ07001 517 aa12.88□□□□□ -0.35
CCNC-203ENST00000369220 SOGA3Q5TF21 947 aa12.88□□□□□ -0.35
CCNC-203ENST00000369220 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
CCNC-203ENST00000369220 TMC4Q7Z404 712 aa12.88□□□□□ -0.35
CCNC-203ENST00000369220 SIRT2Q8IXJ6 389 aa12.88□□□□□ -0.35
CCNC-203ENST00000369220 CNNM1Q9NRU3 951 aa12.88□□□□□ -0.35
CCNC-203ENST00000369220 PCNTO95613 3336 aa12.88□□□□□ -0.35
CCNC-203ENST00000369220 KLRK1P26718 216 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 AOC3Q16853 763 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 TBC1D16Q8TBP0 767 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 PSMD1Q99460 953 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 TMX4Q9H1E5 349 aaPredicted RBP12.87□□□□□ -0.35
CCNC-203ENST00000369220 RNF181Q9P0P0 153 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 HDAC5Q9UQL6 1122 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 RIPOR2Q9Y4F9 1068 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 SBF1O95248 1867 aa12.87□□□□□ -0.35
CCNC-203ENST00000369220 UFL1O94874 794 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
CCNC-203ENST00000369220 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 C6orf229H3BNL8 230 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 LMNB1P20700 586 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 ATG9AQ7Z3C6 839 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 TXNRD3Q86VQ6 643 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 RTFDC1Q9BY42 306 aaPredicted RBP12.86□□□□□ -0.35
CCNC-203ENST00000369220 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 XDHP47989 1333 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 CCDC88AQ3V6T2 1871 aa12.86□□□□□ -0.35
CCNC-203ENST00000369220 ATP8B2P98198 1209 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 EYA2O00167 538 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 IARSP41252 1262 aaKnown RBP12.85□□□□□ -0.35
CCNC-203ENST00000369220 POLA2Q14181 598 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 COPRSQ9NQ92 184 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
CCNC-203ENST00000369220 A0A1B0GUL6 1792 aa12.84□□□□□ -0.35
CCNC-203ENST00000369220 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
CCNC-203ENST00000369220 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
CCNC-203ENST00000369220 CHD4Q14839 1912 aa12.84□□□□□ -0.35
CCNC-203ENST00000369220 WASHC4Q2M389 1173 aa12.83□□□□□ -0.35
CCNC-203ENST00000369220 METTL24Q5JXM2 366 aa12.83□□□□□ -0.35
CCNC-203ENST00000369220 LARGE2Q8N3Y3 721 aa12.83□□□□□ -0.35
CCNC-203ENST00000369220 ZNF804BA4D1E1 1349 aa12.83□□□□□ -0.36
CCNC-203ENST00000369220 EXOC6BQ9Y2D4 811 aa12.83□□□□□ -0.36
CCNC-203ENST00000369220 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 GRIPAP1Q4V328 841 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 DBNDD1Q9H9R9 158 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
CCNC-203ENST00000369220 PDE8BO95263 885 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 ANKRD2Q9GZV1 360 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 KCNQ5Q9NR82 932 aa12.82□□□□□ -0.36
CCNC-203ENST00000369220 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
CCNC-203ENST00000369220 IRS2Q9Y4H2 1338 aa12.81□□□□□ -0.36
CCNC-203ENST00000369220 CIAO1O76071 339 aa12.81□□□□□ -0.36
CCNC-203ENST00000369220 SASH1O94885 1247 aa12.81□□□□□ -0.36
CCNC-203ENST00000369220 ATP2B4P23634 1241 aa12.81□□□□□ -0.36
CCNC-203ENST00000369220 KCNJ4P48050 445 aa12.81□□□□□ -0.36
CCNC-203ENST00000369220 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
CCNC-203ENST00000369220 ZNF541Q9H0D2 1346 aa12.81□□□□□ -0.36
CCNC-203ENST00000369220 YDJCA8MPS7 323 aa12.8□□□□□ -0.36
CCNC-203ENST00000369220 TFCP2Q12800 502 aa12.8□□□□□ -0.36
CCNC-203ENST00000369220 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
CCNC-203ENST00000369220 ZC3H12CQ9C0D7 883 aaKnown RBP12.8□□□□□ -0.36
CCNC-203ENST00000369220 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
CCNC-203ENST00000369220 LEMD3Q9Y2U8 911 aa12.8□□□□□ -0.36
CCNC-203ENST00000369220 APBB1O00213 710 aa12.8□□□□□ -0.36
CCNC-203ENST00000369220 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
CCNC-203ENST00000369220 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
CCNC-203ENST00000369220 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
CCNC-203ENST00000369220 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
CCNC-203ENST00000369220 DICER1Q9UPY3 1922 aaKnown RBP12.79□□□□□ -0.36
CCNC-203ENST00000369220 GYG1P46976 350 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 JDP2Q8WYK2 163 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 SCN9AQ15858 1988 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 FGFR2P21802 821 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 YY1P25490 414 aa12.79□□□□□ -0.36
CCNC-203ENST00000369220 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
CCNC-203ENST00000369220 NIM1KQ8IY84 436 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms