RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 RNF113AO15541 343 aaKnown RBP12.11□□□□□ -0.47
TPM3-209ENST00000368527 IFIT1P09914 478 aaKnown RBP12.11□□□□□ -0.47
TPM3-209ENST00000368527 TTLL7Q6ZT98 887 aa12.11□□□□□ -0.47
TPM3-209ENST00000368527 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
TPM3-209ENST00000368527 KLHDC4Q8TBB5 520 aa12.11□□□□□ -0.47
TPM3-209ENST00000368527 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
TPM3-209ENST00000368527 DNAJC2Q99543 621 aaKnown RBP12.11□□□□□ -0.47
TPM3-209ENST00000368527 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
TPM3-209ENST00000368527 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
TPM3-209ENST00000368527 COL14A1Q05707 1796 aaKnown RBP12.1□□□□□ -0.47
TPM3-209ENST00000368527 VPS37CA5D8V6 355 aaPredicted RBP12.1□□□□□ -0.47
TPM3-209ENST00000368527 CAVIN2O95810 425 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 A1BGP04217 495 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 TPM3P06753 285 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 CSF1RP07333 972 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 TERF1P54274 439 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 DHX32Q7L7V1 743 aaKnown RBP12.1□□□□□ -0.47
TPM3-209ENST00000368527 ZNF589Q86UQ0 364 aaPredicted RBP12.1□□□□□ -0.47
TPM3-209ENST00000368527 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 NEUROD6Q96NK8 337 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 NOL7Q9UMY1 257 aaKnown RBP12.1□□□□□ -0.47
TPM3-209ENST00000368527 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 WDR19Q8NEZ3 1342 aa12.1□□□□□ -0.47
TPM3-209ENST00000368527 ERVV-1B6SEH8 477 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 FGD1P98174 961 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 IFIT5Q13325 482 aaKnown RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 TOB2Q14106 344 aaPredicted RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 TAF7LQ5H9L4 462 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 GIGYF2Q6Y7W6 1299 aaKnown RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 AGXT2Q9BYV1 514 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.09□□□□□ -0.47
TPM3-209ENST00000368527 DDX19AQ9NUU7 478 aaKnown RBP12.09□□□□□ -0.47
TPM3-209ENST00000368527 CFAP45Q9UL16 551 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 STRCQ7RTU9 1775 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 PLCH1Q4KWH8 1693 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
TPM3-209ENST00000368527 A0A1B0GUL7 405 aa12.08□□□□□ -0.48
TPM3-209ENST00000368527 GOLGA6L4A6NEF3 574 aa12.08□□□□□ -0.48
TPM3-209ENST00000368527 DHX16O60231 1041 aaKnown RBP12.08□□□□□ -0.48
TPM3-209ENST00000368527 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
TPM3-209ENST00000368527 PFKFB2O60825 505 aa12.08□□□□□ -0.48
TPM3-209ENST00000368527 LARGE1O95461 756 aa12.08□□□□□ -0.48
TPM3-209ENST00000368527 TTC39AQ5SRH9 613 aa12.08□□□□□ -0.48
TPM3-209ENST00000368527 ZNF274Q96GC6 653 aaPredicted RBP12.08□□□□□ -0.48
TPM3-209ENST00000368527 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
TPM3-209ENST00000368527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.08□□□□□ -0.48
TPM3-209ENST00000368527 DISP2A7MBM2 1401 aa12.08□□□□□ -0.48
TPM3-209ENST00000368527 GOLIM4O00461 696 aa12.07□□□□□ -0.48
TPM3-209ENST00000368527 FIBPO43427 364 aa12.07□□□□□ -0.48
TPM3-209ENST00000368527 GADD45BO75293 160 aaPredicted RBP12.07□□□□□ -0.48
TPM3-209ENST00000368527 CCDC192P0DO97 292 aa12.07□□□□□ -0.48
TPM3-209ENST00000368527 CPA1P15085 419 aa12.07□□□□□ -0.48
TPM3-209ENST00000368527 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
TPM3-209ENST00000368527 SMARCC2Q8TAQ2 1214 aa12.07□□□□□ -0.48
TPM3-209ENST00000368527 BCL9O00512 1426 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 H3BQV1 296 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 TPM2P07951 284 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 CYP21A2P08686 494 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
TPM3-209ENST00000368527 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
TPM3-209ENST00000368527 IMMTQ16891 758 aaKnown RBP12.06□□□□□ -0.48
TPM3-209ENST00000368527 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 Q6ZUG5 572 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 NECAB1Q8N987 351 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 ZNF396Q96N95 335 aaPredicted RBP12.06□□□□□ -0.48
TPM3-209ENST00000368527 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 NSFL1CQ9UNZ2 370 aaKnown RBP12.06□□□□□ -0.48
TPM3-209ENST00000368527 ZKSCAN5Q9Y2L8 839 aa12.06□□□□□ -0.48
TPM3-209ENST00000368527 COL22A1Q8NFW1 1626 aaPredicted RBP12.05□□□□□ -0.48
TPM3-209ENST00000368527 ANKRD18BA2A2Z9 1011 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 UQCRFS1P1P0C7P4 283 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
TPM3-209ENST00000368527 EVCP57679 992 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 EXOSC10Q01780 885 aaKnown RBP12.05□□□□□ -0.48
TPM3-209ENST00000368527 ST3GAL1Q11201 340 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 PIGBQ92521 554 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 APPBP2Q92624 585 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 SPATA32Q96LK8 384 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
TPM3-209ENST00000368527 TOGARAM1Q9Y4F4 1720 aa12.05□□□□□ -0.48
TPM3-209ENST00000368527 GOLGA6L6A8MZA4 724 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 EXOC5O00471 708 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 CTAGE5O15320 804 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 HSPD1P10809 573 aaKnown RBP12.04□□□□□ -0.48
TPM3-209ENST00000368527 TIMM10P62072 90 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 JARID2Q92833 1246 aaPredicted RBP12.04□□□□□ -0.48
TPM3-209ENST00000368527 EDC3Q96F86 508 aaKnown RBP12.04□□□□□ -0.48
TPM3-209ENST00000368527 NUP62CLQ9H1M0 184 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 GDPD2Q9HCC8 539 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 USP25Q9UHP3 1055 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 MAST3O60307 1309 aa12.04□□□□□ -0.48
TPM3-209ENST00000368527 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
TPM3-209ENST00000368527 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms