RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 TAF6LQ9Y6J9 622 aa29.86■■■□□ 2.37
CLK2-203ENST00000368361 ANKRD18BA2A2Z9 1011 aa29.85■■■□□ 2.37
CLK2-203ENST00000368361 SH3TC1Q8TE82 1336 aa29.85■■■□□ 2.37
CLK2-203ENST00000368361 COL9A3Q14050 684 aaPredicted RBP29.84■■■□□ 2.37
CLK2-203ENST00000368361 VPS72Q15906 364 aa29.84■■■□□ 2.37
CLK2-203ENST00000368361 SLFNL1Q499Z3 407 aa29.84■■■□□ 2.37
CLK2-203ENST00000368361 SKOR2Q2VWA4 1001 aaPredicted RBP29.84■■■□□ 2.37
CLK2-203ENST00000368361 CCDC158Q5M9N0 1113 aa29.84■■■□□ 2.37
CLK2-203ENST00000368361 USPL1Q5W0Q7 1092 aa29.84■■■□□ 2.37
CLK2-203ENST00000368361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.84■■■□□ 2.37
CLK2-203ENST00000368361 BRD1O95696 1058 aa29.83■■■□□ 2.37
CLK2-203ENST00000368361 FOXD4L5Q5VV16 416 aaPredicted RBP29.83■■■□□ 2.37
CLK2-203ENST00000368361 FOXD4L4Q8WXT5 416 aaPredicted RBP29.83■■■□□ 2.37
CLK2-203ENST00000368361 SPEF2Q9C093 1822 aa29.83■■■□□ 2.37
CLK2-203ENST00000368361 LARGE1O95461 756 aa29.83■■■□□ 2.37
CLK2-203ENST00000368361 METTL24Q5JXM2 366 aa29.83■■■□□ 2.37
CLK2-203ENST00000368361 GORABQ5T7V8 394 aa29.83■■■□□ 2.37
CLK2-203ENST00000368361 SUSD4Q5VX71 490 aa29.83■■■□□ 2.37
CLK2-203ENST00000368361 SMARCC1Q92922 1105 aaPredicted RBP29.83■■■□□ 2.37
CLK2-203ENST00000368361 HMG20BQ9P0W2 317 aa29.83■■■□□ 2.37
CLK2-203ENST00000368361 CAMTA2O94983 1202 aa29.82■■■□□ 2.36
CLK2-203ENST00000368361 PSMA5P28066 241 aa29.82■■■□□ 2.36
CLK2-203ENST00000368361 TTC39AQ5SRH9 613 aa29.82■■■□□ 2.36
CLK2-203ENST00000368361 CNNM1Q9NRU3 951 aa29.81■■■□□ 2.36
CLK2-203ENST00000368361 FKBP4Q02790 459 aaKnown RBP eCLIP29.8■■■□□ 2.36
CLK2-203ENST00000368361 TSGA10IPQ3SY00 556 aa29.8■■■□□ 2.36
CLK2-203ENST00000368361 FAM177BA6PVY3 158 aa29.8■■■□□ 2.36
CLK2-203ENST00000368361 HELLSQ9NRZ9 838 aa29.8■■■□□ 2.36
CLK2-203ENST00000368361 COL5A3P25940 1745 aaPredicted RBP29.79■■■□□ 2.36
CLK2-203ENST00000368361 ATP2B3Q16720 1220 aa29.79■■■□□ 2.36
CLK2-203ENST00000368361 CHAMP1Q96JM3 812 aa29.79■■■□□ 2.36
CLK2-203ENST00000368361 ZMYM1Q5SVZ6 1142 aa29.79■■■□□ 2.36
CLK2-203ENST00000368361 TICAM2Q86XR7 235 aa29.79■■■□□ 2.36
CLK2-203ENST00000368361 HCLS1P14317 486 aaPredicted RBP29.78■■■□□ 2.36
CLK2-203ENST00000368361 SCARF1Q14162 830 aa29.78■■■□□ 2.36
CLK2-203ENST00000368361 BLOC1S2Q6QNY1 142 aa29.78■■■□□ 2.36
CLK2-203ENST00000368361 FNBP4Q8N3X1 1017 aaPredicted RBP29.77■■■□□ 2.36
CLK2-203ENST00000368361 VGLL2Q8N8G2 317 aa29.77■■■□□ 2.36
CLK2-203ENST00000368361 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.77■■■□□ 2.36
CLK2-203ENST00000368361 U3KPZ7 1027 aaPredicted RBP29.77■■■□□ 2.36
CLK2-203ENST00000368361 UTP14AQ9BVJ6 771 aaKnown RBP29.77■■■□□ 2.36
CLK2-203ENST00000368361 LMBRD1Q9NUN5 540 aa29.77■■■□□ 2.36
CLK2-203ENST00000368361 ZSCAN31Q96LW9 406 aaPredicted RBP29.76■■■□□ 2.35
CLK2-203ENST00000368361 AK7Q96M32 723 aa29.76■■■□□ 2.35
CLK2-203ENST00000368361 TCEANC2Q96MN5 208 aa29.76■■■□□ 2.35
CLK2-203ENST00000368361 RNF113AO15541 343 aaKnown RBP29.76■■■□□ 2.35
CLK2-203ENST00000368361 RPS6KB1P23443 525 aa29.76■■■□□ 2.35
CLK2-203ENST00000368361 ME3Q16798 604 aa29.76■■■□□ 2.35
CLK2-203ENST00000368361 CCDC83Q8IWF9 413 aa29.76■■■□□ 2.35
CLK2-203ENST00000368361 SH2B1Q9NRF2 756 aaPredicted RBP29.76■■■□□ 2.35
CLK2-203ENST00000368361 DDX49Q9Y6V7 483 aaKnown RBP29.75■■■□□ 2.35
CLK2-203ENST00000368361 CYP21A2P08686 494 aa29.74■■■□□ 2.35
CLK2-203ENST00000368361 PARP10Q53GL7 1025 aa29.74■■■□□ 2.35
CLK2-203ENST00000368361 TPCN1Q9ULQ1 816 aa29.74■■■□□ 2.35
CLK2-203ENST00000368361 NIP7Q9Y221 180 aaKnown RBP eCLIP29.74■■■□□ 2.35
CLK2-203ENST00000368361 MAST3O60307 1309 aa29.74■■■□□ 2.35
CLK2-203ENST00000368361 KLHL40Q2TBA0 621 aa29.74■■■□□ 2.35
CLK2-203ENST00000368361 LINC00116Q8NCU8 138 aa29.74■■■□□ 2.35
CLK2-203ENST00000368361 LRP5O75197 1615 aa29.74■■■□□ 2.35
CLK2-203ENST00000368361 PDE8BO95263 885 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 KCNQ4P56696 695 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 KRT32Q14532 448 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 PI16Q6UXB8 463 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 ZNF831Q5JPB2 1677 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 FSD2A1L4K1 749 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 ZAP70P43403 619 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 ST3GAL1Q11201 340 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 PTF1AQ7RTS3 328 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 SMC3Q9UQE7 1217 aa29.73■■■□□ 2.35
CLK2-203ENST00000368361 DDX60Q8IY21 1712 aaKnown RBP29.72■■■□□ 2.35
CLK2-203ENST00000368361 ABCC12Q96J65 1359 aa29.72■■■□□ 2.35
CLK2-203ENST00000368361 GOLGA6L3A6NEY3 463 aa29.72■■■□□ 2.35
CLK2-203ENST00000368361 USP21Q9UK80 565 aa29.72■■■□□ 2.35
CLK2-203ENST00000368361 DSCC1Q9BVC3 393 aa29.71■■■□□ 2.35
CLK2-203ENST00000368361 WDR33Q9C0J8 1336 aaKnown RBP29.71■■■□□ 2.35
CLK2-203ENST00000368361 PRPF40AO75400 957 aaKnown RBP29.71■■■□□ 2.35
CLK2-203ENST00000368361 NTSR2O95665 410 aa29.71■■■□□ 2.35
CLK2-203ENST00000368361 M0R2C6 588 aa29.7■■■□□ 2.35
CLK2-203ENST00000368361 MCAMP43121 646 aa29.7■■■□□ 2.35
CLK2-203ENST00000368361 TOB2Q14106 344 aaPredicted RBP29.7■■■□□ 2.35
CLK2-203ENST00000368361 OSBP2Q969R2 916 aa29.7■■■□□ 2.35
CLK2-203ENST00000368361 NEK1Q96PY6 1258 aa29.7■■■□□ 2.35
CLK2-203ENST00000368361 ALDH8A1Q9H2A2 487 aaPredicted RBP29.7■■■□□ 2.35
CLK2-203ENST00000368361 BCORQ6W2J9 1755 aa29.7■■■□□ 2.34
CLK2-203ENST00000368361 NECAB1Q8N987 351 aa29.7■■■□□ 2.34
CLK2-203ENST00000368361 HSPD1P10809 573 aaKnown RBP29.69■■■□□ 2.34
CLK2-203ENST00000368361 ANKRD1Q15327 319 aa29.69■■■□□ 2.34
CLK2-203ENST00000368361 L1TD1Q5T7N2 865 aaKnown RBP29.69■■■□□ 2.34
CLK2-203ENST00000368361 SEC31BQ9NQW1 1179 aa29.69■■■□□ 2.34
CLK2-203ENST00000368361 AKAP11Q9UKA4 1901 aa29.69■■■□□ 2.34
CLK2-203ENST00000368361 DTNBO60941 627 aa29.69■■■□□ 2.34
CLK2-203ENST00000368361 SPATA31A6Q5VVP1 1343 aa29.68■■■□□ 2.34
CLK2-203ENST00000368361 LRRFIP1Q32MZ4 808 aaKnown RBP29.68■■■□□ 2.34
CLK2-203ENST00000368361 HELBQ8NG08 1087 aaPredicted RBP29.68■■■□□ 2.34
CLK2-203ENST00000368361 MROH5Q6ZUA9 1318 aa29.68■■■□□ 2.34
CLK2-203ENST00000368361 SYT1P21579 422 aa29.67■■■□□ 2.34
CLK2-203ENST00000368361 GJB2P29033 226 aa29.67■■■□□ 2.34
CLK2-203ENST00000368361 ZNF652Q9Y2D9 606 aa29.67■■■□□ 2.34
CLK2-203ENST00000368361 ZFYP08048 801 aaPredicted RBP29.66■■■□□ 2.34
CLK2-203ENST00000368361 STOX1Q6ZVD7 989 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms