RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TFCP2Q12800 502 aa14.74□□□□□ -0.05
USF1-203ENST00000368021 TPTE2Q6XPS3 522 aa14.74□□□□□ -0.05
USF1-203ENST00000368021 ECHDC1Q9NTX5 307 aa14.74□□□□□ -0.05
USF1-203ENST00000368021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.74□□□□□ -0.05
USF1-203ENST00000368021 C10orf71Q711Q0 1435 aa14.74□□□□□ -0.05
USF1-203ENST00000368021 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 GLRX3O76003 335 aaKnown RBP14.73□□□□□ -0.05
USF1-203ENST00000368021 SEC24BO95487 1268 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 HCLS1P14317 486 aaPredicted RBP14.73□□□□□ -0.05
USF1-203ENST00000368021 TGFB2P61812 414 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 TNNI3KQ59H18 835 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 TAF7LQ5H9L4 462 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 SLC10A5Q5PT55 438 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 TSHZ3Q63HK5 1081 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 TBC1D9Q6ZT07 1266 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 ZNF594Q96JF6 807 aaPredicted RBP14.73□□□□□ -0.05
USF1-203ENST00000368021 UPF2Q9HAU5 1272 aaKnown RBP14.73□□□□□ -0.05
USF1-203ENST00000368021 FPGT-TNNI3KV9GXZ4 949 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 ST5P78524 1137 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 CCDC152Q4G0S7 254 aa14.73□□□□□ -0.05
USF1-203ENST00000368021 YBX3P16989 372 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■□□□□ 8.7
USF1-203ENST00000368021 LRRC24Q50LG9 513 aa14.72□□□□□ -0.05
USF1-203ENST00000368021 KCNA3P22001 575 aa14.71□□□□□ -0.05
USF1-203ENST00000368021 ANP32AP39687 249 aaKnown RBP14.71□□□□□ -0.05
USF1-203ENST00000368021 ERFEQ4G0M1 354 aa14.71□□□□□ -0.05
USF1-203ENST00000368021 CASC1Q6TDU7 716 aa14.71□□□□□ -0.05
USF1-203ENST00000368021 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
USF1-203ENST00000368021 BCS1LQ9Y276 419 aa14.71□□□□□ -0.05
USF1-203ENST00000368021 SF3B3Q15393 1217 aaKnown RBP14.71□□□□□ -0.06
USF1-203ENST00000368021 LDHAL6AQ6ZMR3 332 aa14.71□□□□□ -0.06
USF1-203ENST00000368021 C2CD5Q86YS7 1000 aa14.71□□□□□ -0.06
USF1-203ENST00000368021 BRIP1Q9BX63 1249 aa14.71□□□□□ -0.06
USF1-203ENST00000368021 PUS3Q9BZE2 481 aaKnown RBP14.71□□□□□ -0.06
USF1-203ENST00000368021 CCDC8Q9H0W5 538 aaPredicted RBP14.71□□□□□ -0.06
USF1-203ENST00000368021 CEP126Q9P2H0 1117 aa14.71□□□□□ -0.06
USF1-203ENST00000368021 RIPOR2Q9Y4F9 1068 aa14.71□□□□□ -0.06
USF1-203ENST00000368021 H0YIN7 160 aa14.7□□□□□ -0.06
USF1-203ENST00000368021 DBNLQ9UJU6 430 aaKnown RBP14.7□□□□□ -0.06
USF1-203ENST00000368021 AKAP2Q9Y2D5 859 aa14.7□□□□□ -0.06
USF1-203ENST00000368021 ZNF609O15014 1411 aa14.7□□□□□ -0.06
USF1-203ENST00000368021 TRIM6-TRIM34B2RNG4 842 aa14.69□□□□□ -0.06
USF1-203ENST00000368021 PDE6BP35913 854 aa14.69□□□□□ -0.06
USF1-203ENST00000368021 ZNF622Q969S3 477 aaKnown RBP eCLIP14.69□□□□□ -0.067e-6■■□□□ 12.8
USF1-203ENST00000368021 TLR7Q9NYK1 1049 aaKnown RBP14.69□□□□□ -0.06
USF1-203ENST00000368021 PIM2Q9P1W9 311 aa14.69□□□□□ -0.06
USF1-203ENST00000368021 AK9Q5TCS8 1911 aa14.69□□□□□ -0.06
USF1-203ENST00000368021 ABCC12Q96J65 1359 aa14.69□□□□□ -0.06
USF1-203ENST00000368021 CNTROBQ8N137 903 aa14.69□□□□□ -0.06
USF1-203ENST00000368021 NRXN2Q9P2S2 1712 aa14.68□□□□□ -0.06
USF1-203ENST00000368021 ATP5JP18859 108 aa14.68□□□□□ -0.06
USF1-203ENST00000368021 TBC1D32Q96NH3 1257 aa14.68□□□□□ -0.06
USF1-203ENST00000368021 CNNM1Q9NRU3 951 aa14.68□□□□□ -0.06
USF1-203ENST00000368021 RIC1Q4ADV7 1423 aa14.68□□□□□ -0.06
USF1-203ENST00000368021 MROH5Q6ZUA9 1318 aa14.68□□□□□ -0.06
USF1-203ENST00000368021 KIF13BQ9NQT8 1826 aa14.67□□□□□ -0.06
USF1-203ENST00000368021 MFAP1P55081 439 aaKnown RBP14.67□□□□□ -0.06
USF1-203ENST00000368021 RILPL2Q969X0 211 aa14.67□□□□□ -0.06
USF1-203ENST00000368021 CDC5LQ99459 802 aaKnown RBP14.67□□□□□ -0.06
USF1-203ENST00000368021 A0A1B0GUL7 405 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 DALRD3Q5D0E6 543 aaKnown RBP14.66□□□□□ -0.06
USF1-203ENST00000368021 METTL24Q5JXM2 366 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 VGLL2Q8N8G2 317 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 EVI5LQ96CN4 794 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 NLRP3Q96P20 1036 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 MPHOSPH8Q99549 860 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 DBNDD2Q9BQY9 259 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
USF1-203ENST00000368021 SRGNP10124 158 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 IGHMBP2P38935 993 aaKnown RBP14.66□□□□□ -0.06
USF1-203ENST00000368021 C3orf67Q6ZVT6 689 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 SEC31BQ9NQW1 1179 aa14.66□□□□□ -0.06
USF1-203ENST00000368021 PDE8BO95263 885 aa14.65□□□□□ -0.06
USF1-203ENST00000368021 CHMLP26374 656 aa14.65□□□□□ -0.06
USF1-203ENST00000368021 TIMM10P62072 90 aa14.65□□□□□ -0.06
USF1-203ENST00000368021 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
USF1-203ENST00000368021 IPO9Q96P70 1041 aaKnown RBP14.65□□□□□ -0.06
USF1-203ENST00000368021 C22orf23Q9BZE7 217 aa14.65□□□□□ -0.06
USF1-203ENST00000368021 ANKRD31Q8N7Z5 1873 aa14.65□□□□□ -0.06
USF1-203ENST00000368021 KIAA1551Q9HCM1 1747 aa14.64□□□□□ -0.07
USF1-203ENST00000368021 TTLL6Q8N841 843 aa14.64□□□□□ -0.07
USF1-203ENST00000368021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.64□□□□□ -0.07
USF1-203ENST00000368021 PODXL2Q9NZ53 605 aa14.64□□□□□ -0.07
USF1-203ENST00000368021 GRIN3BO60391 1043 aa14.64□□□□□ -0.07
USF1-203ENST00000368021 REC8O95072 547 aa14.64□□□□□ -0.07
USF1-203ENST00000368021 RBM25P49756 843 aaKnown RBP14.64□□□□□ -0.07
USF1-203ENST00000368021 ATP2B3Q16720 1220 aa14.64□□□□□ -0.07
USF1-203ENST00000368021 MASTLQ96GX5 879 aa14.64□□□□□ -0.07
USF1-203ENST00000368021 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
USF1-203ENST00000368021 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
USF1-203ENST00000368021 ANKRD18AQ8IVF6 992 aa14.63□□□□□ -0.07
USF1-203ENST00000368021 HAUS7Q99871 368 aa14.63□□□□□ -0.07
USF1-203ENST00000368021 BOLA2Q9H3K6 86 aa14.63□□□□□ -0.07
USF1-203ENST00000368021 BSDC1Q9NW68 430 aaPredicted RBP14.63□□□□□ -0.07
USF1-203ENST00000368021 KLRG2A4D1S0 409 aaPredicted RBP14.62□□□□□ -0.07
USF1-203ENST00000368021 MAP4K4O95819 1239 aaPredicted RBP14.62□□□□□ -0.07
USF1-203ENST00000368021 PUM3Q15397 648 aaKnown RBP14.62□□□□□ -0.07
USF1-203ENST00000368021 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
USF1-203ENST00000368021 XAGE2Q96GT9 111 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 ESYT1Q9BSJ8 1104 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 HIP1O00291 1037 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms