RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SMARCC1Q92922 1105 aaPredicted RBP8.45□□□□□ -1.06
VTA1-202ENST00000367630 ARHGAP23Q9P227 1491 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 KIF5BP33176 963 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 CCDC148Q8NFR7 591 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 RAB34Q9BZG1 259 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 CACNA1FO60840 1977 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 SH3TC1Q8TE82 1336 aa8.45□□□□□ -1.06
VTA1-202ENST00000367630 ATP8B1O43520 1251 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 APPP05067 770 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 BMS1Q14692 1282 aaKnown RBP8.44□□□□□ -1.06
VTA1-202ENST00000367630 DHX37Q8IY37 1157 aaKnown RBP8.44□□□□□ -1.06
VTA1-202ENST00000367630 THUMPD2Q9BTF0 503 aaKnown RBP8.44□□□□□ -1.06
VTA1-202ENST00000367630 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 TIGD1Q96MW7 591 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 TMOD3Q9NYL9 352 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 CD163L1Q9NR16 1453 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 FAM160A1Q05DH4 1040 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 NOLC1Q14978 699 aaKnown RBP eCLIP8.44□□□□□ -1.06
VTA1-202ENST00000367630 VPS37DQ86XT2 251 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 TSPYL6Q8N831 410 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 TRIML1Q8N9V2 468 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 UBAC1Q9BSL1 405 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 A0A1W2PQ27 194 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 A0A1W2PQ64 194 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 A0A1W2PQD8 194 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 SERPINC1P01008 464 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 ZNF397Q8NF99 534 aaPredicted RBP8.44□□□□□ -1.06
VTA1-202ENST00000367630 MYD88Q99836 296 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 SNX14Q9Y5W7 946 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 SMARCA5O60264 1052 aaPredicted RBP8.44□□□□□ -1.06
VTA1-202ENST00000367630 USP8P40818 1118 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 AMPD3Q01432 767 aa8.44□□□□□ -1.06
VTA1-202ENST00000367630 GABPB1Q06547 395 aaPredicted RBP8.43□□□□□ -1.06
VTA1-202ENST00000367630 ZNF771Q7L3S4 317 aaPredicted RBP8.43□□□□□ -1.06
VTA1-202ENST00000367630 AIDAQ96BJ3 306 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 CCDC51Q96ER9 411 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 CALCOCO1Q9P1Z2 691 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 CKAP4Q07065 602 aaKnown RBP8.43□□□□□ -1.06
VTA1-202ENST00000367630 PARP10Q53GL7 1025 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 MYRIPQ8NFW9 859 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 CCDC94Q9BW85 323 aaPredicted RBP8.43□□□□□ -1.06
VTA1-202ENST00000367630 CHPF2Q9P2E5 772 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 AK2P54819 239 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 MCTP2Q6DN12 878 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 IL1RAPL2Q9NP60 686 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 MRFAP1L1Q96HT8 127 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 GSPT1P15170 499 aaKnown RBP8.43□□□□□ -1.06
VTA1-202ENST00000367630 RDXP35241 583 aaKnown RBP8.43□□□□□ -1.06
VTA1-202ENST00000367630 ZNF165P49910 485 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 SLC52A2Q9HAB3 445 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 SLIT3O75094 1523 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 RIMBP3CA6NJZ7 1639 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 RIMBP3BA6NNM3 1639 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 RIMBP3Q9UFD9 1639 aa8.43□□□□□ -1.06
VTA1-202ENST00000367630 LDHCP07864 332 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 FOXD4L5Q5VV16 416 aaPredicted RBP8.42□□□□□ -1.06
VTA1-202ENST00000367630 FOXD4L4Q8WXT5 416 aaPredicted RBP8.42□□□□□ -1.06
VTA1-202ENST00000367630 GLT8D2Q9H1C3 349 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 SEC24BO95487 1268 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 CALML3P27482 149 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 AIMP1Q12904 312 aaKnown RBP8.42□□□□□ -1.06
VTA1-202ENST00000367630 SF3B2Q13435 895 aaKnown RBP8.42□□□□□ -1.06
VTA1-202ENST00000367630 BEND3Q5T5X7 828 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 RUFY1Q96T51 708 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 PAG1Q9NWQ8 432 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 POLR3GO15318 223 aaPredicted RBP8.42□□□□□ -1.06
VTA1-202ENST00000367630 TYRO3Q06418 890 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 CLUL1Q15846 466 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 CEP112Q8N8E3 955 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 TMCO3Q6UWJ1 677 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 LEKR1Q6ZMV7 388 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 MAGEF1Q9HAY2 307 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 TOMM22Q9NS69 142 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 KIF5CO60282 957 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 DCTN1Q14203 1278 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 KBTBD3Q8NAB2 608 aa8.42□□□□□ -1.06
VTA1-202ENST00000367630 KCNJ6P48051 423 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 IQCA1Q86XH1 822 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 ERO1AQ96HE7 468 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 PFKFB2O60825 505 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 RNF214Q8ND24 703 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 BPIFA3Q9BQP9 254 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 LZTS2Q9BRK4 669 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 SLC12A7Q9Y666 1083 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 MROH5Q6ZUA9 1318 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 TOP1P11387 765 aaKnown RBP8.41□□□□□ -1.06
VTA1-202ENST00000367630 NMIQ13287 307 aaPredicted RBP8.41□□□□□ -1.06
VTA1-202ENST00000367630 FSIP1Q8NA03 581 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 MPHOSPH8Q99549 860 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 FAM83GA6ND36 823 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 SLC27A2O14975 620 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 SYT1P21579 422 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 DDIT3P35638 169 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 CAVIN4Q5BKX8 364 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
VTA1-202ENST00000367630 UBXN4Q92575 508 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 578.4 ms