RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PIP4K2BP78356 416 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 SMC1AQ14683 1233 aaKnown RBP18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 MPRIPQ6WCQ1 1025 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 AMOTL1Q8IY63 956 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 TANGO6Q9C0B7 1094 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 ZNF569Q5MCW4 686 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 MRFAP1L1Q96HT8 127 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 TM6SF1Q9BZW5 370 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.52
CLSTN1-201ENST00000361311 FANCCQ00597 558 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 PLCD4Q9BRC7 762 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 NCBP1Q09161 790 aaKnown RBP18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 GOLGA8AA7E2F4 631 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 MICU3Q86XE3 530 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 ZDHHC9Q9Y397 364 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 TUBBP07437 444 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 KANK3Q6NY19 840 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 JADE2Q9NQC1 790 aa18.32■□□□□ 0.52
CLSTN1-201ENST00000361311 TDO2P48775 406 aa18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 MPHOSPH8Q99549 860 aa18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 EIF4G3O43432 1585 aaKnown RBP18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 PRDM15P57071 1507 aaPredicted RBP18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 DHX32Q7L7V1 743 aaKnown RBP18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 USO1O60763 962 aaKnown RBP18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 CCDC144CPQ8IYA2 1237 aa18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 XPO4Q9C0E2 1151 aaKnown RBP18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 MAST1Q9Y2H9 1570 aa18.31■□□□□ 0.52
CLSTN1-201ENST00000361311 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 ALG1Q9BT22 464 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 OSBPL3Q9H4L5 887 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 ETF1P62495 437 aaKnown RBP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 TERF2Q15554 542 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 CDK5RAP3Q96JB5 506 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 CCDC85AQ96PX6 553 aaPredicted RBP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 ADAMTS12P58397 1594 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 ELP1O95163 1332 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 MATR3P43243 847 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 SSRP1Q08945 709 aaKnown RBP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 FBXO31Q5XUX0 539 aaPredicted RBP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 AIDAQ96BJ3 306 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 SLC12A7Q9Y666 1083 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 ERVK-7P63135 1459 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 JAK2O60674 1132 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 WDHD1O75717 1129 aaPredicted RBP18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 CHMP4BP1P59074 171 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 NCOA7Q8NI08 942 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 TAF4BQ92750 862 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 FAM227BQ96M60 508 aa18.3■□□□□ 0.52
CLSTN1-201ENST00000361311 ALDH1L1O75891 902 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 CKAP4Q07065 602 aaKnown RBP18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 CHST3Q7LGC8 479 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 SBNO2Q9Y2G9 1366 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 PHAXQ9H814 394 aaKnown RBP18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 A0A087WZG4 1122 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 DDX41Q9UJV9 622 aaKnown RBP18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 FANCAO15360 1455 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 CCDC196A0A1B0GTZ2 297 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 DNA2P51530 1060 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 SPTLC3Q9NUV7 552 aa18.29■□□□□ 0.52
CLSTN1-201ENST00000361311 ARHGAP6O43182 974 aa18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 TAX1BP1Q86VP1 789 aa18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 RASEFQ8IZ41 740 aa18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 SNRKQ9NRH2 765 aa18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 GRM8O00222 908 aa18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 CT47A1Q5JQC4 288 aaPredicted RBP18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 CTAGE1Q96RT6 745 aa18.28■□□□□ 0.52
CLSTN1-201ENST00000361311 IFIT3O14879 490 aaKnown RBP18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 CYP2E1P05181 493 aaPredicted RBP18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 ZSCAN20P17040 1043 aaPredicted RBP18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 EHBP1Q8NDI1 1231 aa18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 RBM33Q96EV2 1170 aaKnown RBP18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 ACEP12821 1306 aa18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 DRC1Q96MC2 740 aa18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 BRAPQ7Z569 592 aa18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 GPR161Q8N6U8 529 aaKnown RBP18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 ANKRD24Q8TF21 1146 aa18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
CLSTN1-201ENST00000361311 ESCO1Q5FWF5 840 aa18.27■□□□□ 0.51
CLSTN1-201ENST00000361311 FKBP15Q5T1M5 1219 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 SLC26A6Q9BXS9 759 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 CCDC91Q7Z6B0 441 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 AKAP2Q9Y2D5 859 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 HSF2BPO75031 334 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 AFMP43652 599 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 NAPBQ9H115 298 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 TPCN1Q9ULQ1 816 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 FBXO38Q6PIJ6 1188 aa18.26■□□□□ 0.51
CLSTN1-201ENST00000361311 PTH1RQ03431 593 aa18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 OTUD6BQ8N6M0 293 aa18.25■□□□□ 0.51
CLSTN1-201ENST00000361311 BCCIPQ9P287 314 aaKnown RBP eCLIP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms