RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PDE8AO60658 829 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 EIF5P55010 431 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 CTSWP56202 376 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 CCDC158Q5M9N0 1113 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 ZNF34Q8IZ26 560 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 TTLL11Q8NHH1 800 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 SMARCC1Q92922 1105 aaPredicted RBP21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 USP21Q9UK80 565 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 CCDC9Q9Y3X0 531 aaKnown RBP21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 MYH7P12883 1935 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 ABCC12Q96J65 1359 aa21.9■■□□□ 1.1
PDLIM7-203ENST00000359895 ANKRD18BA2A2Z9 1011 aa21.89■■□□□ 1.09
PDLIM7-203ENST00000359895 IRS4O14654 1257 aaPredicted RBP21.89■■□□□ 1.09
PDLIM7-203ENST00000359895 ANKRD1Q15327 319 aa21.89■■□□□ 1.09
PDLIM7-203ENST00000359895 WDR33Q9C0J8 1336 aaKnown RBP21.89■■□□□ 1.09
PDLIM7-203ENST00000359895 COL5A3P25940 1745 aaPredicted RBP21.89■■□□□ 1.09
PDLIM7-203ENST00000359895 GOLIM4O00461 696 aa21.88■■□□□ 1.09
PDLIM7-203ENST00000359895 ATP6V1AP38606 617 aa21.88■■□□□ 1.09
PDLIM7-203ENST00000359895 BLOC1S2Q6QNY1 142 aa21.88■■□□□ 1.09
PDLIM7-203ENST00000359895 DDX49Q9Y6V7 483 aaKnown RBP21.88■■□□□ 1.09
PDLIM7-203ENST00000359895 LAMB2P55268 1798 aa21.88■■□□□ 1.09
PDLIM7-203ENST00000359895 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 SIK1P57059 783 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 GORABQ5T7V8 394 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 ZNF772Q68DY9 489 aaPredicted RBP21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 INTS5Q6P9B9 1019 aaKnown RBP21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 LMBRD1Q9NUN5 540 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 TBC1D2BQ9UPU7 963 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 NDUFB9Q9Y6M9 179 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 MYH14Q7Z406 1995 aaKnown RBP21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 CPA1P15085 419 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 ITGA6P23229 1130 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 TTC39AQ5SRH9 613 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 ACSBG1Q96GR2 724 aa21.87■■□□□ 1.09
PDLIM7-203ENST00000359895 RIC1Q4ADV7 1423 aa21.86■■□□□ 1.09
PDLIM7-203ENST00000359895 CRKLP46109 303 aaKnown RBP21.86■■□□□ 1.09
PDLIM7-203ENST00000359895 ZMYM1Q5SVZ6 1142 aa21.86■■□□□ 1.09
PDLIM7-203ENST00000359895 XAGE2Q96GT9 111 aa21.86■■□□□ 1.09
PDLIM7-203ENST00000359895 SMC3Q9UQE7 1217 aa21.86■■□□□ 1.09
PDLIM7-203ENST00000359895 RIPOR2Q9Y4F9 1068 aa21.86■■□□□ 1.09
PDLIM7-203ENST00000359895 BCORQ6W2J9 1755 aa21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 LRP5O75197 1615 aa21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 A0A0G2JS52 829 aa21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 RNF113AO15541 343 aaKnown RBP21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 RPS6KB1P23443 525 aa21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 LDHAL6AQ6ZMR3 332 aa21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 LAMA4Q16363 1823 aa21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 ARAP2Q8WZ64 1704 aa21.85■■□□□ 1.09
PDLIM7-203ENST00000359895 UBN2Q6ZU65 1347 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 PDIA4P13667 645 aaKnown RBP21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 HSP90B1P14625 803 aaKnown RBP21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 ATP2B3Q16720 1220 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 PARP10Q53GL7 1025 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 METTL24Q5JXM2 366 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 SYNE4Q8N205 404 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 CCDC85AQ96PX6 553 aaPredicted RBP21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 DSCC1Q9BVC3 393 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 GREM2Q9H772 168 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 ATRNO75882 1429 aa21.84■■□□□ 1.09
PDLIM7-203ENST00000359895 ZFYP08048 801 aaPredicted RBP21.83■■□□□ 1.09
PDLIM7-203ENST00000359895 CNNM1Q9NRU3 951 aa21.83■■□□□ 1.09
PDLIM7-203ENST00000359895 DDX60Q8IY21 1712 aaKnown RBP21.83■■□□□ 1.08
PDLIM7-203ENST00000359895 MRE11P49959 708 aa21.82■■□□□ 1.08
PDLIM7-203ENST00000359895 VPS72Q15906 364 aa21.82■■□□□ 1.08
PDLIM7-203ENST00000359895 SEC62Q99442 399 aaKnown RBP21.82■■□□□ 1.08
PDLIM7-203ENST00000359895 AKAP11Q9UKA4 1901 aa21.82■■□□□ 1.08
PDLIM7-203ENST00000359895 CCDC129Q6ZRS4 1044 aa21.82■■□□□ 1.08
PDLIM7-203ENST00000359895 PRPF40AO75400 957 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 LARGE1O95461 756 aa21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 ADORA1P30542 326 aa21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 ITPK1Q13572 414 aa21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 CCDC83Q8IWF9 413 aa21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 ZNF512BQ96KM6 892 aaPredicted RBP21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 NEK1Q96PY6 1258 aa21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 QTRT2Q9H974 415 aaKnown RBP21.81■■□□□ 1.08
PDLIM7-203ENST00000359895 CAMTA2O94983 1202 aa21.8■■□□□ 1.08
PDLIM7-203ENST00000359895 ME3Q16798 604 aa21.8■■□□□ 1.08
PDLIM7-203ENST00000359895 TCHHQ07283 1943 aa21.8■■□□□ 1.08
PDLIM7-203ENST00000359895 STX6O43752 255 aa21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 MBD3O95983 291 aa21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 HMGB1P09429 215 aaKnown RBP21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 FKBP4Q02790 459 aaKnown RBP eCLIP21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 FOXD4L5Q5VV16 416 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 FOXD4L4Q8WXT5 416 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 LARP6Q9BRS8 491 aaKnown RBP21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 TRPC5Q9UL62 973 aaPredicted RBP21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 MROH5Q6ZUA9 1318 aa21.79■■□□□ 1.08
PDLIM7-203ENST00000359895 ZSCAN22P10073 491 aaPredicted RBP21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 VGLL2Q8N8G2 317 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 TPCN1Q9ULQ1 816 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 ZNF652Q9Y2D9 606 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 ATP6V1DQ9Y5K8 247 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 MAST3O60307 1309 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 PDE8BO95263 885 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 CYP21A2P08686 494 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 SUSD4Q5VX71 490 aa21.78■■□□□ 1.08
PDLIM7-203ENST00000359895 RTL9Q8NET4 1388 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms