RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 KMT5BQ4FZB7 885 aa27.8■■■□□ 2.04
NPAS3-203ENST00000357798 ZNF530Q6P9A1 599 aaPredicted RBP27.79■■■□□ 2.04
NPAS3-203ENST00000357798 GSDMDP57764 484 aa27.79■■■□□ 2.04
NPAS3-203ENST00000357798 COL15A1P39059 1388 aa27.79■■■□□ 2.04
NPAS3-203ENST00000357798 GOLPH3LQ9H4A5 285 aa27.78■■■□□ 2.04
NPAS3-203ENST00000357798 DDX58O95786 925 aaKnown RBP27.78■■■□□ 2.04
NPAS3-203ENST00000357798 SNW1Q13573 536 aaKnown RBP27.78■■■□□ 2.04
NPAS3-203ENST00000357798 USP16Q9Y5T5 823 aa27.78■■■□□ 2.04
NPAS3-203ENST00000357798 NFAT5O94916 1531 aa27.78■■■□□ 2.04
NPAS3-203ENST00000357798 PFKFB2O60825 505 aa27.77■■■□□ 2.04
NPAS3-203ENST00000357798 KINO60870 393 aaKnown RBP27.77■■■□□ 2.04
NPAS3-203ENST00000357798 PODXL2Q9NZ53 605 aa27.77■■■□□ 2.04
NPAS3-203ENST00000357798 SCRN1Q12765 414 aa27.77■■■□□ 2.04
NPAS3-203ENST00000357798 CEP57L1Q8IYX8 460 aa27.77■■■□□ 2.04
NPAS3-203ENST00000357798 RGPD2P0DJD1 1756 aa27.77■■■□□ 2.04
NPAS3-203ENST00000357798 FAM160A1Q05DH4 1040 aa27.77■■■□□ 2.04
NPAS3-203ENST00000357798 PLEKHO1Q53GL0 409 aaPredicted RBP27.77■■■□□ 2.04
NPAS3-203ENST00000357798 ENGASEQ8NFI3 743 aa27.77■■■□□ 2.04
NPAS3-203ENST00000357798 RNMTO43148 476 aaKnown RBP27.76■■■□□ 2.03
NPAS3-203ENST00000357798 SLU7O95391 586 aaKnown RBP27.76■■■□□ 2.03
NPAS3-203ENST00000357798 ATP5JP18859 108 aa27.76■■■□□ 2.03
NPAS3-203ENST00000357798 ZNF396Q96N95 335 aaPredicted RBP27.76■■■□□ 2.03
NPAS3-203ENST00000357798 SIL1Q9H173 461 aa27.76■■■□□ 2.03
NPAS3-203ENST00000357798 LAMA4Q16363 1823 aa27.76■■■□□ 2.03
NPAS3-203ENST00000357798 TERF2Q15554 542 aa27.76■■■□□ 2.03
NPAS3-203ENST00000357798 FILIP1Q7Z7B0 1213 aa27.76■■■□□ 2.03
NPAS3-203ENST00000357798 ARHGAP23Q9P227 1491 aa27.75■■■□□ 2.03
NPAS3-203ENST00000357798 OSBPL5Q9H0X9 879 aaPredicted RBP27.75■■■□□ 2.03
NPAS3-203ENST00000357798 IMPACTQ9P2X3 320 aa27.75■■■□□ 2.03
NPAS3-203ENST00000357798 CEBPZQ03701 1054 aaKnown RBP27.75■■■□□ 2.03
NPAS3-203ENST00000357798 MPRIPQ6WCQ1 1025 aa27.75■■■□□ 2.03
NPAS3-203ENST00000357798 NSUN7Q8NE18 718 aaKnown RBP27.75■■■□□ 2.03
NPAS3-203ENST00000357798 NAT10Q9H0A0 1025 aaKnown RBP27.75■■■□□ 2.03
NPAS3-203ENST00000357798 PHRF1Q9P1Y6 1649 aaKnown RBP27.74■■■□□ 2.03
NPAS3-203ENST00000357798 FBXO38Q6PIJ6 1188 aa27.74■■■□□ 2.03
NPAS3-203ENST00000357798 ZNF609O15014 1411 aa27.74■■■□□ 2.03
NPAS3-203ENST00000357798 ERBB3P21860 1342 aa27.73■■■□□ 2.03
NPAS3-203ENST00000357798 FAM193AP78312 1265 aa27.73■■■□□ 2.03
NPAS3-203ENST00000357798 SIPA1L3O60292 1781 aaPredicted RBP27.73■■■□□ 2.03
NPAS3-203ENST00000357798 CYP21A2P08686 494 aa27.73■■■□□ 2.03
NPAS3-203ENST00000357798 HMGB1P09429 215 aaKnown RBP27.73■■■□□ 2.03
NPAS3-203ENST00000357798 AMOTQ4VCS5 1084 aa27.73■■■□□ 2.03
NPAS3-203ENST00000357798 EDC3Q96F86 508 aaKnown RBP27.73■■■□□ 2.03
NPAS3-203ENST00000357798 ELF2Q15723 593 aa27.72■■■□□ 2.03
NPAS3-203ENST00000357798 USP28Q96RU2 1077 aa27.72■■■□□ 2.03
NPAS3-203ENST00000357798 TRMT1Q9NXH9 659 aaKnown RBP27.72■■■□□ 2.03
NPAS3-203ENST00000357798 CYB5RLQ6IPT4 315 aa27.72■■■□□ 2.03
NPAS3-203ENST00000357798 DDX21Q9NR30 783 aaKnown RBP eCLIP27.72■■■□□ 2.03
NPAS3-203ENST00000357798 AOPEPQ8N6M6 819 aa27.71■■■□□ 2.03
NPAS3-203ENST00000357798 FSIP1Q8NA03 581 aa27.71■■■□□ 2.03
NPAS3-203ENST00000357798 ABCC6O95255 1503 aa27.71■■■□□ 2.03
NPAS3-203ENST00000357798 PXDNQ92626 1479 aa27.7■■■□□ 2.03
NPAS3-203ENST00000357798 FTOQ9C0B1 505 aaKnown RBP eCLIP27.7■■■□□ 2.02
NPAS3-203ENST00000357798 L2HGDHQ9H9P8 463 aa27.7■■■□□ 2.02
NPAS3-203ENST00000357798 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.7■■■□□ 2.02
NPAS3-203ENST00000357798 V9GYY5 206 aaPredicted RBP27.7■■■□□ 2.02
NPAS3-203ENST00000357798 SETD1BQ9UPS6 1966 aaKnown RBP27.7■■■□□ 2.02
NPAS3-203ENST00000357798 PTPDC1A2A3K4 754 aa27.7■■■□□ 2.02
NPAS3-203ENST00000357798 IGKV5-2P06315 115 aa27.7■■■□□ 2.02
NPAS3-203ENST00000357798 KCNJ6P48051 423 aa27.7■■■□□ 2.02
NPAS3-203ENST00000357798 DHX8Q14562 1220 aaKnown RBP27.7■■■□□ 2.02
NPAS3-203ENST00000357798 MCMDC2Q4G0Z9 681 aa27.7■■■□□ 2.02
NPAS3-203ENST00000357798 FGD1P98174 961 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 C1orf141Q5JVX7 400 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 NBPF11Q86T75 865 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 CREBRFQ8IUR6 639 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 CTDNEP1O95476 244 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 CCDC150Q8NCX0 1101 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 KLHDC4Q8TBB5 520 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 COPRSQ9NQ92 184 aa27.69■■■□□ 2.02
NPAS3-203ENST00000357798 DBNLQ9UJU6 430 aaKnown RBP27.69■■■□□ 2.02
NPAS3-203ENST00000357798 DHX32Q7L7V1 743 aaKnown RBP27.68■■■□□ 2.02
NPAS3-203ENST00000357798 TUBB4AP04350 444 aa27.68■■■□□ 2.02
NPAS3-203ENST00000357798 C14orf37Q86TY3 774 aa27.68■■■□□ 2.02
NPAS3-203ENST00000357798 BPIFA3Q9BQP9 254 aa27.68■■■□□ 2.02
NPAS3-203ENST00000357798 PRAMEF22A3QJZ6 481 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 TNNI3KQ59H18 835 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 CCDC129Q6ZRS4 1044 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 FPGT-TNNI3KV9GXZ4 949 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 SALL1Q9NSC2 1324 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 CCDC66A2RUB6 948 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 PSDA5PKW4 1024 aaPredicted RBP27.67■■■□□ 2.02
NPAS3-203ENST00000357798 STOX1Q6ZVD7 989 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 MRPS27Q92552 414 aaKnown RBP27.67■■■□□ 2.02
NPAS3-203ENST00000357798 AGXT2Q9BYV1 514 aa27.67■■■□□ 2.02
NPAS3-203ENST00000357798 ME1P48163 572 aa27.66■■■□□ 2.02
NPAS3-203ENST00000357798 FMR1NBQ8N0W7 255 aaPredicted RBP27.66■■■□□ 2.02
NPAS3-203ENST00000357798 LRRC2Q9BYS8 371 aa27.66■■■□□ 2.02
NPAS3-203ENST00000357798 SH3TC1Q8TE82 1336 aa27.66■■■□□ 2.02
NPAS3-203ENST00000357798 NEURL1BA8MQ27 555 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 E4F1Q66K89 784 aaPredicted RBP27.65■■■□□ 2.02
NPAS3-203ENST00000357798 A0A087WWV3 80 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 H2AFXP16104 143 aaPredicted RBP27.65■■■□□ 2.02
NPAS3-203ENST00000357798 NEXNQ0ZGT2 675 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 RIC3Q7Z5B4 369 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 HAUS7Q99871 368 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 A0A1W2PQ27 194 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 A0A1W2PQ64 194 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 A0A1W2PQD8 194 aa27.65■■■□□ 2.02
NPAS3-203ENST00000357798 AIMP1Q12904 312 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms