RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ARPP19P56211 112 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 INF2Q27J81 1249 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 SPDYE1Q8NFV5 336 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 CCDC77Q9BR77 488 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 SAP30BPQ9UHR5 308 aaKnown RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 POLIQ9UNA4 740 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 PRDM2Q13029 1718 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 BIN1O00499 593 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 OPA1O60313 960 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 BIRC3Q13489 604 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 CHRNA2Q15822 529 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 CCDC25Q86WR0 208 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 ZNF654Q8IZM8 581 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 MIPOL1Q8TD10 442 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 JAKMIP2Q96AA8 810 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 SMC6Q96SB8 1091 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 SPC25Q9HBM1 224 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 FAM180AQ6UWF9 173 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 JPH4Q96JJ6 628 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 CDC5LQ99459 802 aaKnown RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 NCAPGQ9BPX3 1015 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 V9GYY5 206 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-203ENST00000357654 WDR97A6NE52 1622 aa6.59□□□□□ -1.35
BRCA1-203ENST00000357654 XPAP23025 273 aaPredicted RBP6.59□□□□□ -1.36
BRCA1-203ENST00000357654 MAN1A1P33908 653 aa6.59□□□□□ -1.36
BRCA1-203ENST00000357654 GSTO1P78417 241 aa6.59□□□□□ -1.36
BRCA1-203ENST00000357654 AMPD3Q01432 767 aa6.59□□□□□ -1.36
BRCA1-203ENST00000357654 KANK3Q6NY19 840 aa6.59□□□□□ -1.36
BRCA1-203ENST00000357654 PPP1R42Q7Z4L9 355 aa6.59□□□□□ -1.36
BRCA1-203ENST00000357654 ERMNQ8TAM6 284 aa6.59□□□□□ -1.36
BRCA1-203ENST00000357654 PNISRQ8TF01 805 aaKnown RBP6.59□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC169A6NNP5 214 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 POLR3GO15318 223 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 LDHCP07864 332 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 MRE11P49959 708 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 VPS52Q8N1B4 723 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC12Q8WUD4 166 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 NR1I2O75469 434 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 TMEM67Q5HYA8 995 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 GADL1Q6ZQY3 521 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC83Q8IWF9 413 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 CNNM3Q8NE01 707 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 RBM28Q9NW13 759 aaKnown RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 SETD5Q9C0A6 1442 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 YEATS4O95619 227 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 RRP1P56182 461 aaKnown RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 IL1RL1Q01638 556 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 KIAA1524Q8TCG1 905 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 TTC12Q9H892 705 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 SPDYE3A6NKU9 549 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 BNIP3LO60238 219 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 HSP90AA4PQ58FG1 418 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 UTP14CQ5TAP6 766 aaKnown RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 EXOSC9Q06265 439 aaKnown RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 BSPRYQ5W0U4 402 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 USP37Q86T82 979 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 METTL13Q8N6R0 699 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 SLC26A6Q9BXS9 759 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 BLVRAP53004 296 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 PPARDQ03181 441 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 C1orf228Q6PIY5 440 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC155Q8N6L0 562 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 POMGNT1Q8WZA1 660 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 USP25Q9UHP3 1055 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 LRFN2Q9ULH4 789 aa6.58□□□□□ -1.36
BRCA1-203ENST00000357654 RRBP1Q9P2E9 1410 aaKnown RBP6.58□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC172P0C7W6 258 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 PRPF40BQ6NWY9 871 aaKnown RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 PDCD7Q8N8D1 485 aaKnown RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 C8orf76Q96K31 380 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 PLIN2Q99541 437 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 BAG1Q99933 345 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CRNKL1Q9BZJ0 848 aaKnown RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 C6orf50Q9HD87 102 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CABP1Q9NZU7 370 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 URI1O94763 535 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 ANKRD35Q8N283 1001 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 DCLK2Q8N568 766 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 ZSWIM4Q9H7M6 989 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 FAM204AQ9H8W3 233 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 C11orf95C9JLR9 678 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 FMNL3Q8IVF7 1028 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 ZC3H12CQ9C0D7 883 aaKnown RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 METTL14Q9HCE5 456 aaKnown RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CLIP2Q9UDT6 1046 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CD2APQ9Y5K6 639 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 PHLDB1Q86UU1 1377 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 TOP1P11387 765 aaKnown RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 AFMP43652 599 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 TRPC3Q13507 836 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 PDE1CQ14123 709 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 SPECC1LQ69YQ0 1117 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CTR9Q6PD62 1173 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 SKAP1Q86WV1 359 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 MICU3Q86XE3 530 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC170Q8IYT3 715 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 MSANTD4Q8NCY6 345 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CASP2P42575 452 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms