RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 GOLGA1Q92805 767 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 MATR3P43243 847 aaKnown RBP eCLIP17.88■□□□□ 0.452e-6■■■■□ 22
TRAPPC11-202ENST00000357207 FAM173BQ6P4H8 233 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 CCDC113Q9H0I3 377 aa17.88■□□□□ 0.45
TRAPPC11-202ENST00000357207 GADD45BO75293 160 aaPredicted RBP17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 BRD1O95696 1058 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 GPTP24298 496 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 APOBRQ0VD83 1088 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 BMP15O95972 392 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 ATL3Q6DD88 541 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 GAS2L3Q86XJ1 694 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 CEP112Q8N8E3 955 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 BCCIPQ9P287 314 aaKnown RBP eCLIP17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 SGSM2O43147 1006 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 PRC1O43663 620 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 TRIM21P19474 475 aaKnown RBP17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 CKAP4Q07065 602 aaKnown RBP17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 TMEM266Q2M3C6 531 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 TRIM47Q96LD4 638 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
TRAPPC11-202ENST00000357207 KIF20AO95235 890 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 AMPD3Q01432 767 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 WTAPQ15007 396 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 FAM114A1Q8IWE2 563 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 ZFP91Q96JP5 570 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 SNX14Q9Y5W7 946 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 ZNF76P36508 570 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 IL15P40933 162 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 ZRSR2Q15696 482 aaKnown RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 RRAGBQ5VZM2 374 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 DNMT1P26358 1616 aaKnown RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 CYLC1P35663 651 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 MAP2K1Q02750 393 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 FAM160A1Q05DH4 1040 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 ZNF444Q8N0Y2 327 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 ANKRD62A6NC57 917 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 CAPN2P17655 700 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 WDR62O43379 1518 aa17.86■□□□□ 0.45
TRAPPC11-202ENST00000357207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 RMND1Q9NWS8 449 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 RSPH14Q9UHP6 348 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 TRAPPC8Q9Y2L5 1435 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 ZNF500O60304 480 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 CWF19L2Q2TBE0 894 aaKnown RBP17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 CHST3Q7LGC8 479 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 TMTC2Q8N394 836 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 DENND4BO75064 1496 aaPredicted RBP17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 CTAGE9A4FU28 777 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 KIF5BP33176 963 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 TUBB4BP68371 445 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 BRAPQ7Z569 592 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 PAG1Q9NWQ8 432 aa17.85■□□□□ 0.45
TRAPPC11-202ENST00000357207 FSD2A1L4K1 749 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 BICDL1Q6ZP65 573 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 NPATQ14207 1427 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 POGZQ7Z3K3 1410 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 A0A1B0GVL5 298 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 CHL1O00533 1208 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 NBPF7P0C2Y1 421 aaPredicted RBP17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 U2AF2P26368 475 aaKnown RBP eCLIP17.84■□□□□ 0.451e-7■■□□□ 12.8
TRAPPC11-202ENST00000357207 CALML4Q96GE6 196 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 UQCRFS1P1P0C7P4 283 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 RTN1Q16799 776 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 CCDC40Q4G0X9 1142 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 ANKRD18AQ8IVF6 992 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 TRMT2AQ8IZ69 625 aaKnown RBP17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 CBX8Q9HC52 389 aa17.84■□□□□ 0.45
TRAPPC11-202ENST00000357207 AKAP4Q5JQC9 854 aa17.83■□□□□ 0.45
TRAPPC11-202ENST00000357207 FLT4P35916 1363 aa17.83■□□□□ 0.45
TRAPPC11-202ENST00000357207 TMCO5BA8MYB1 307 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 ZNF75DP51815 510 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 MNAT1P51948 309 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 PIP4K2BP78356 416 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 KARSQ15046 597 aaKnown RBP17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 MAATS1Q7Z4T9 603 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 DZIP1Q86YF9 867 aaKnown RBP17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 EYA1Q99502 592 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 KRT23Q9C075 422 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 CLSTN2Q9H4D0 955 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 MYL5Q02045 173 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 ATP2B3Q16720 1220 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 AOX1Q06278 1338 aa17.83■□□□□ 0.44
TRAPPC11-202ENST00000357207 ZSCAN29Q8IWY8 852 aaPredicted RBP17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 RPS6KB1P23443 525 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 GTF3C6Q969F1 213 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 NOP2P46087 812 aaKnown RBP17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 TMEM132AQ24JP5 1023 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 LZTFL1Q9NQ48 299 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 INCENPQ9NQS7 918 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 TRIM75PA6NK02 468 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 TUBBP07437 444 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 CETN2P41208 172 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 CNNM2Q9H8M5 875 aa17.82■□□□□ 0.44
TRAPPC11-202ENST00000357207 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms